RMC-6236_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description RMC-6236 perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the RMC-6236_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.150977
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0510248
PCBP2 poly(rC) binding protein 2 0.0354599
FAM13A family with sequence similarity 13, member A 0.033894
CEMIP cell migration inducing protein, hyaluronan binding 0.0332079
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0331091
ARRDC3 arrestin domain containing 3 0.0327951
NAMPT nicotinamide phosphoribosyltransferase 0.0301926
IRS2 insulin receptor substrate 2 0.025828
EEF2 eukaryotic translation elongation factor 2 0.0242967
SLTM SAFB-like, transcription modulator 0.0238691
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0234883
LOC102724023 ES1 protein homolog, mitochondrial 0.0217688
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0216612
TBC1D22A TBC1 domain family, member 22A 0.020483
AGO2 argonaute RISC catalytic component 2 0.0190783
ELL2 elongation factor, RNA polymerase II, 2 0.0177735
RPS3 ribosomal protein S3 0.0174057
ZNF638 zinc finger protein 638 0.0154395
EPAS1 endothelial PAS domain protein 1 0.0153676
NSUN6 NOP2/Sun domain family, member 6 0.0149514
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0145655
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0144305
RPS2 ribosomal protein S2 0.0143816
SRRM2 serine/arginine repetitive matrix 2 0.0143309
SMAD3 SMAD family member 3 0.0138852
CYLD cylindromatosis (turban tumor syndrome) 0.0138215
RAD51B RAD51 paralog B 0.0133433
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.013173
RPL3 ribosomal protein L3 0.0125591
RUNX1 runt-related transcription factor 1 0.012398
YBX3 Y box binding protein 3 0.0123295
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0120098
RPS12 ribosomal protein S12 0.0110364
MLF1 myeloid leukemia factor 1 0.01091
RPS3A ribosomal protein S3A 0.010455
TBC1D15 TBC1 domain family, member 15 0.00991369
FNIP1 folliculin interacting protein 1 0.00972245
USP9X ubiquitin specific peptidase 9, X-linked 0.00971051
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.00965872
RPS7 ribosomal protein S7 0.00962922
KIAA1328 KIAA1328 0.00956141
SON SON DNA binding protein 0.00953793
MAFF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F 0.00951225
BMP6 bone morphogenetic protein 6 0.00940397
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.00922441
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0091257
PCCA propionyl CoA carboxylase, alpha polypeptide 0.00900816
BHLHE40 basic helix-loop-helix family, member e40 0.00894718
MCTP1 multiple C2 domains, transmembrane 1 0.00885007
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.00870047
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.00820668
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.00804816
HSPA8 heat shock 70kDa protein 8 0.00798321
ZBTB10 zinc finger and BTB domain containing 10 0.00794118
NGLY1 N-glycanase 1 0.00788999
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.00772327
HBP1 HMG-box transcription factor 1 0.00765986
YTHDC1 YTH domain containing 1 0.00764039
ZC3H12B zinc finger CCCH-type containing 12B 0.00758128
DHFR dihydrofolate reductase 0.00755999
CSNK1E casein kinase 1, epsilon 0.0073495
TTLL10 tubulin tyrosine ligase-like family member 10 0.00733302
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.00732992
CIB1 calcium and integrin binding 1 (calmyrin) 0.00725111
NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1 0.00723207
ATP13A3 ATPase type 13A3 0.00721935
ZNF292 zinc finger protein 292 0.00705632
CABLES1 Cdk5 and Abl enzyme substrate 1 0.00695237
SHB Src homology 2 domain containing adaptor protein B 0.00693093
ARGLU1 arginine and glutamate rich 1 0.00682809
IGSF9B immunoglobulin superfamily, member 9B 0.00670514
EIF5 eukaryotic translation initiation factor 5 0.00660834
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0066018
ZEB1 zinc finger E-box binding homeobox 1 0.006531
CUL4A cullin 4A 0.00649993
PTPRD protein tyrosine phosphatase, receptor type, D 0.00645815
PER2 period circadian clock 2 0.00644954
MREG melanoregulin 0.00632869
KYNU kynureninase 0.00625602
BSDC1 BSD domain containing 1 0.0061932
BBS9 Bardet-Biedl syndrome 9 0.00615324
CHD1 chromodomain helicase DNA binding protein 1 0.00614709
ZFP36 ZFP36 ring finger protein 0.00603078
PHC3 polyhomeotic homolog 3 (Drosophila) 0.00589735
GPC5 glypican 5 0.00587092
ADAR adenosine deaminase, RNA-specific 0.00579993
HPS5 Hermansky-Pudlak syndrome 5 0.0057518
SMOC1 SPARC related modular calcium binding 1 0.00568058
LGALS8 lectin, galactoside-binding, soluble, 8 0.00567628
TNIP1 TNFAIP3 interacting protein 1 0.0056655
B2M beta-2-microglobulin 0.00560426
KDM6A lysine (K)-specific demethylase 6A 0.00559515
TMEM45B transmembrane protein 45B 0.00557188
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 0.00555915
CHMP1B charged multivesicular body protein 1B 0.00555225
NFE2L2 nuclear factor, erythroid 2-like 2 0.00553705
H1-10 H1.10 linker histone 0.00553549
EIF4B eukaryotic translation initiation factor 4B 0.00549043
VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae) 0.00548852

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.312964
ASPH aspartate beta-hydroxylase -0.193574
TMSB10 thymosin beta 10 -0.148362
TXNRD1 thioredoxin reductase 1 -0.143599
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.120966
ACTG1 actin gamma 1 -0.119566
PTPRM protein tyrosine phosphatase, receptor type, M -0.11121
CAV1 caveolin 1, caveolae protein, 22kDa -0.109076
LAMC2 laminin, gamma 2 -0.108475
LMO7 LIM domain 7 -0.107005
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.10556
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0972832
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0913539
S100A10 S100 calcium binding protein A10 -0.0889826
PKM pyruvate kinase, muscle -0.0838088
ANXA2 annexin A2 -0.0768826
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0741017
KRT18 keratin 18, type I -0.0654999
SCEL sciellin -0.065145
PTMA prothymosin, alpha -0.0647266
LDHA lactate dehydrogenase A -0.0640154
PDLIM5 PDZ and LIM domain 5 -0.061837
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0616414
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.059875
PATJ PATJ crumbs cell polarity complex component -0.0595455
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0564689
AHNAK AHNAK nucleoprotein -0.0553625
THSD4 thrombospondin, type I, domain containing 4 -0.0527074
EGR1 early growth response 1 -0.0516366
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0508058
LPP LIM domain containing preferred translocation partner in lipoma -0.0501673
KRT7 keratin 7, type II -0.048421
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0476106
SLC38A2 solute carrier family 38, member 2 -0.0470905
VCL vinculin -0.0465796
RNF213 ring finger protein 213 -0.0461681
IGFBP5 insulin-like growth factor binding protein 5 -0.0458944
BZW1 basic leucine zipper and W2 domains 1 -0.0450454
TPM4 tropomyosin 4 -0.0446285
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0441723
HDLBP high density lipoprotein binding protein -0.0432866
CUX1 cut-like homeobox 1 -0.0423919
USP53 ubiquitin specific peptidase 53 -0.0422913
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0418689
TES testin LIM domain protein -0.0417637
RAB10 RAB10, member RAS oncogene family -0.0411255
KRT8 keratin 8, type II -0.0408402
ENO1 enolase 1, (alpha) -0.0404525
CCND1 cyclin D1 -0.0400862
OSMR oncostatin M receptor -0.0399527
MYOF myoferlin -0.0395802
LOC112694756 uncharaterized LOC112694756 -0.0389617
ARHGAP32 Rho GTPase activating protein 32 -0.0387777
CST3 cystatin C -0.0384633
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0379544
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0376715
GNAS GNAS complex locus -0.0375489
AGR2 anterior gradient 2 -0.03752
DSG2 desmoglein 2 -0.0373345
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0369255
TPT1 tumor protein, translationally-controlled 1 -0.036669
AKAP13 A kinase (PRKA) anchor protein 13 -0.0363941
EZR ezrin -0.0349714
MACF1 microtubule-actin crosslinking factor 1 -0.0345044
AKAP12 A kinase (PRKA) anchor protein 12 -0.0343464
RAB1A RAB1A, member RAS oncogene family -0.0333481
SEC31A SEC31 homolog A (S. cerevisiae) -0.033084
PGK1 phosphoglycerate kinase 1 -0.0328605
ZMYND8 zinc finger, MYND-type containing 8 -0.0324011
IER3 immediate early response 3 -0.0323047
IGF1R insulin-like growth factor 1 receptor -0.032081
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0319953
H1-0 H1.0 linker histone -0.0317866
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.031612
FBXO11 F-box protein 11 -0.0315537
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0311759
RPS24 ribosomal protein S24 -0.0310078
TJP1 tight junction protein 1 -0.0308578
FNDC3B fibronectin type III domain containing 3B -0.0307859
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0306943
MCU mitochondrial calcium uniporter -0.0306098
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0305969
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0305064
EHBP1 EH domain binding protein 1 -0.0303053
EPS8 epidermal growth factor receptor pathway substrate 8 -0.030147
SEC61G Sec61 gamma subunit -0.0298919
KPNB1 karyopherin (importin) beta 1 -0.029854
PRKCA protein kinase C, alpha -0.0297881
DSPP dentin sialophosphoprotein -0.0295038
NABP1 nucleic acid binding protein 1 -0.0292797
RPS25 ribosomal protein S25 -0.0291274
GRAMD1B GRAM domain containing 1B -0.0290724
FLNB filamin B, beta -0.0289622
CDCP1 CUB domain containing protein 1 -0.028591
PDIA3 protein disulfide isomerase family A, member 3 -0.0285801
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0282745
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0282513
PTK2 protein tyrosine kinase 2 -0.0282027
LAMA4 laminin, alpha 4 -0.0278878
CCSER1 coiled-coil serine-rich protein 1 -0.0273948