RMC-6236_NCI-H1792 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description RMC-6236 perturbation in NCI-H1792 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the RMC-6236_NCI-H1792 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.180238
AKAP12 A kinase (PRKA) anchor protein 12 0.149487
PCBP2 poly(rC) binding protein 2 0.095723
SMAD3 SMAD family member 3 0.0806612
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0565839
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0556311
LOC102724023 ES1 protein homolog, mitochondrial 0.0554183
B2M beta-2-microglobulin 0.0540715
IFI44L interferon-induced protein 44-like 0.0496901
IGFBP3 insulin-like growth factor binding protein 3 0.0493232
VIM vimentin 0.0490839
EEF2 eukaryotic translation elongation factor 2 0.0458079
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0410169
RPS12 ribosomal protein S12 0.0409364
BIRC3 baculoviral IAP repeat containing 3 0.0396942
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0388556
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0370308
VEGFA vascular endothelial growth factor A 0.0360064
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0359162
PLIN2 perilipin 2 0.0358666
SP100 SP100 nuclear antigen 0.0349995
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.0347582
ANGPTL4 angiopoietin-like 4 0.0347163
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0346845
SAMD9 sterile alpha motif domain containing 9 0.0342006
NAP1L1 nucleosome assembly protein 1-like 1 0.0339297
IL1R1 interleukin 1 receptor, type I 0.0339085
NFE2L2 nuclear factor, erythroid 2-like 2 0.032452
C15ORF48 chromosome 15 open reading frame 48 0.0311847
GATA6 GATA binding protein 6 0.0300187
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0299081
SRRM2 serine/arginine repetitive matrix 2 0.0295924
RUNX1 runt-related transcription factor 1 0.0288727
MT2A metallothionein 2A 0.0280137
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.027684
EREG epiregulin 0.026656
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0265206
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0263023
SFTPA2 surfactant protein A2 0.0258919
RPS3 ribosomal protein S3 0.0250251
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0247873
RACK1 receptor for activated C kinase 1 0.0244268
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0243084
TMSB4X thymosin beta 4, X-linked 0.0241941
MYH9 myosin, heavy chain 9, non-muscle 0.0241463
CFB complement factor B 0.0241307
ENO1 enolase 1, (alpha) 0.0230168
APLP2 amyloid beta (A4) precursor-like protein 2 0.022968
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.022953
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0228835
MX1 MX dynamin-like GTPase 1 0.0227785
ARRDC3 arrestin domain containing 3 0.0226931
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0226902
RPS8 ribosomal protein S8 0.0226752
NTN4 netrin 4 0.0223459
LDHA lactate dehydrogenase A 0.0221414
LRP1B low density lipoprotein receptor-related protein 1B 0.0219606
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin 0.0219007
BASP1 brain abundant, membrane attached signal protein 1 0.0210243
RPS19 ribosomal protein S19 0.020327
EFEMP1 EGF containing fibulin-like extracellular matrix protein 1 0.0202409
RAD51B RAD51 paralog B 0.0202311
ADM adrenomedullin 0.0201493
AADAC arylacetamide deacetylase 0.0200122
IFI44 interferon-induced protein 44 0.019477
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0193659
C1R complement component 1, r subcomponent 0.0193387
RPL12 ribosomal protein L12 0.0190455
RPS17 ribosomal protein S17 0.0190233
CTSC cathepsin C 0.0186854
ALCAM activated leukocyte cell adhesion molecule 0.0186077
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 0.0184044
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0181435
ADAR adenosine deaminase, RNA-specific 0.0175113
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0168177
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0166116
RPL18 ribosomal protein L18 0.0165728
ECE1 endothelin converting enzyme 1 0.0165606
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0165343
RPS2 ribosomal protein S2 0.0164245
LGALS3 lectin, galactoside-binding, soluble, 3 0.0163073
EIF1 eukaryotic translation initiation factor 1 0.0162259
SH3KBP1 SH3-domain kinase binding protein 1 0.0161558
SCARB2 scavenger receptor class B, member 2 0.0161153
SKAP2 src kinase associated phosphoprotein 2 0.016072
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0159882
SSH1 slingshot protein phosphatase 1 0.0159792
TPI1 triosephosphate isomerase 1 0.015852
MMP2 matrix metallopeptidase 2 0.0158308
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.0157701
SHB Src homology 2 domain containing adaptor protein B 0.0153692
H1-0 H1.0 linker histone 0.0152646
KIF5B kinesin family member 5B 0.0151268
RNF213 ring finger protein 213 0.0150174
RPL37 ribosomal protein L37 0.0149921
KSR1 kinase suppressor of ras 1 0.0148436
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0146684
MX2 MX dynamin-like GTPase 2 0.0143758
PMP22 peripheral myelin protein 22 0.0142235
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0141632

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.113368
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0868291
CDH13 cadherin 13 -0.0845598
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0828508
FN1 fibronectin 1 -0.0815748
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0798483
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0778578
GLCCI1 glucocorticoid induced 1 -0.0710047
RAB1A RAB1A, member RAS oncogene family -0.0688278
TMSB10 thymosin beta 10 -0.0688198
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.067144
PDE4D phosphodiesterase 4D, cAMP-specific -0.0667965
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0661303
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0653674
MTSS1 metastasis suppressor 1 -0.0608988
PSD3 pleckstrin and Sec7 domain containing 3 -0.0598726
HMGA2 high mobility group AT-hook 2 -0.0571715
TFPI2 tissue factor pathway inhibitor 2 -0.055678
RBM39 RNA binding motif protein 39 -0.0546563
NPC1 Niemann-Pick disease, type C1 -0.0508071
SDK1 sidekick cell adhesion molecule 1 -0.0502644
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0497951
ARHGAP5 Rho GTPase activating protein 5 -0.0486723
DPYD dihydropyrimidine dehydrogenase -0.0485768
RAP1B RAP1B, member of RAS oncogene family -0.0484608
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0484324
JMJD1C jumonji domain containing 1C -0.048084
USP34 ubiquitin specific peptidase 34 -0.0480068
NRP1 neuropilin 1 -0.0443544
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0436334
GRB10 growth factor receptor-bound protein 10 -0.0430812
ZEB2 zinc finger E-box binding homeobox 2 -0.0429582
NUMB numb homolog (Drosophila) -0.0425116
EGR1 early growth response 1 -0.040696
AKAP13 A kinase (PRKA) anchor protein 13 -0.0402126
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0400957
OSMR oncostatin M receptor -0.0400446
NRG1 neuregulin 1 -0.0398704
TAS2R14 taste receptor, type 2, member 14 -0.0398481
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0391268
MEF2A myocyte enhancer factor 2A -0.0389299
VMP1 vacuole membrane protein 1 -0.0385005
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0383084
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0382544
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0376161
CDK14 cyclin-dependent kinase 14 -0.037162
FAM20C family with sequence similarity 20, member C -0.0367775
SEC31A SEC31 homolog A (S. cerevisiae) -0.0363644
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0355685
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0352708
OXSR1 oxidative stress responsive 1 -0.0352235
NAMPT nicotinamide phosphoribosyltransferase -0.0346439
CALU calumenin -0.0334204
CLIC4 chloride intracellular channel 4 -0.0333411
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0328016
IQGAP1 IQ motif containing GTPase activating protein 1 -0.032532
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0325047
ANTXR2 anthrax toxin receptor 2 -0.0321177
GPC6 glypican 6 -0.0320714
ZMYND8 zinc finger, MYND-type containing 8 -0.0320331
TPST1 tyrosylprotein sulfotransferase 1 -0.0317945
LOX lysyl oxidase -0.0309306
HM13 histocompatibility (minor) 13 -0.0306828
SPAG9 sperm associated antigen 9 -0.0306826
TM4SF1 transmembrane 4 L six family member 1 -0.0305053
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0304663
STC1 stanniocalcin 1 -0.0295979
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0291916
SETD5 SET domain containing 5 -0.0289421
TMEM165 transmembrane protein 165 -0.0287831
DNER delta/notch-like EGF repeat containing -0.028673
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.028442
GOLGA4 golgin A4 -0.0283935
RICTOR RPTOR independent companion of MTOR, complex 2 -0.028306
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0282331
TIMP3 TIMP metallopeptidase inhibitor 3 -0.027952
TMTC1 transmembrane and tetratricopeptide repeat containing 1 -0.0278476
TMEM263 transmembrane protein 263 -0.0274266
RAI14 retinoic acid induced 14 -0.0271628
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0271381
BIRC6 baculoviral IAP repeat containing 6 -0.0269915
PTMA prothymosin, alpha -0.0268674
DENND4A DENN/MADD domain containing 4A -0.0267946
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0267564
PRELID2 PRELI domain containing 2 -0.0267445
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0266786
FBXO11 F-box protein 11 -0.0266549
DOCK5 dedicator of cytokinesis 5 -0.0265691
PYGL phosphorylase, glycogen, liver -0.0264981
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0264937
EFNA5 ephrin-A5 -0.0264901
RALA v-ral simian leukemia viral oncogene homolog A (ras related) -0.0264036
HDLBP high density lipoprotein binding protein -0.0263099
CLMP CXADR-like membrane protein -0.0262561
CAMK1D calcium/calmodulin-dependent protein kinase ID -0.0259698
SEC24D SEC24 family member D -0.025903
DLG1 discs, large homolog 1 (Drosophila) -0.025898
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0258775
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0258153
BTBD9 BTB (POZ) domain containing 9 -0.0257649