RMC-6236_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description RMC-6236 perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the RMC-6236_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.134456
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.080013
FTH1 ferritin, heavy polypeptide 1 0.0751143
LOC102724023 ES1 protein homolog, mitochondrial 0.0745889
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0668259
INTS6 integrator complex subunit 6 0.0602333
TXNRD1 thioredoxin reductase 1 0.0581166
IGFBP3 insulin-like growth factor binding protein 3 0.0555925
ZSWIM6 zinc finger, SWIM-type containing 6 0.0483523
NFE2L2 nuclear factor, erythroid 2-like 2 0.0480792
EEF2 eukaryotic translation elongation factor 2 0.0458905
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0456746
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0430111
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0409248
TXNIP thioredoxin interacting protein 0.0382795
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0372079
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0338727
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0336911
MBNL2 muscleblind-like splicing regulator 2 0.0310019
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0308014
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0307505
RPS12 ribosomal protein S12 0.0303861
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0303157
TPI1 triosephosphate isomerase 1 0.0298758
OXSR1 oxidative stress responsive 1 0.02916
BIRC3 baculoviral IAP repeat containing 3 0.02843
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0259097
TLE4 transducin-like enhancer of split 4 0.0252998
AHNAK2 AHNAK nucleoprotein 2 0.0251886
FTL ferritin, light polypeptide 0.0251162
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0250534
NCEH1 neutral cholesterol ester hydrolase 1 0.0246979
SIK2 salt-inducible kinase 2 0.0242112
NAP1L1 nucleosome assembly protein 1-like 1 0.0241817
HSPA8 heat shock 70kDa protein 8 0.0233595
ATF3 activating transcription factor 3 0.0231009
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.022811
SET SET nuclear proto-oncogene 0.0219343
AHR aryl hydrocarbon receptor 0.0214104
B2M beta-2-microglobulin 0.0212848
RIOK3 RIO kinase 3 0.021281
USP9X ubiquitin specific peptidase 9, X-linked 0.0211342
DUSP12 dual specificity phosphatase 12 0.0207701
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0200907
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.0199927
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0199845
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) 0.0199812
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0187914
ENO2 enolase 2 (gamma, neuronal) 0.018416
NFE2L1 nuclear factor, erythroid 2-like 1 0.0183835
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0181692
TM9SF4 transmembrane 9 superfamily protein member 4 0.018035
SIK3 SIK family kinase 3 0.0180126
GBP2 guanylate binding protein 2, interferon-inducible 0.0179409
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0178944
CPNE1 copine I 0.0177255
RPS3 ribosomal protein S3 0.017633
SPAG16 sperm associated antigen 16 0.0173746
PCLO piccolo presynaptic cytomatrix protein 0.0171853
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0171508
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0171255
LATS2 large tumor suppressor kinase 2 0.0170789
APLP2 amyloid beta (A4) precursor-like protein 2 0.0167654
RAB31 RAB31, member RAS oncogene family 0.0167553
IPO7 importin 7 0.0166907
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0166725
MED13L mediator complex subunit 13-like 0.0165555
ARRDC3 arrestin domain containing 3 0.0164948
NKD1 naked cuticle homolog 1 (Drosophila) 0.0164826
SMAD3 SMAD family member 3 0.0164783
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0164782
ANKRD28 ankyrin repeat domain 28 0.0162532
LMNA lamin A/C 0.016008
MYOF myoferlin 0.015883
GPHN gephyrin 0.015669
BAZ1B bromodomain adjacent to zinc finger domain, 1B 0.0156513
HSPH1 heat shock 105kDa/110kDa protein 1 0.015645
ZBTB10 zinc finger and BTB domain containing 10 0.0156009
SFTPA2 surfactant protein A2 0.0155963
JARID2 jumonji, AT rich interactive domain 2 0.0153384
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0152967
EIF5 eukaryotic translation initiation factor 5 0.0150823
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0149823
CD59 CD59 molecule, complement regulatory protein 0.0148346
PA2G4 proliferation-associated 2G4, 38kDa 0.0148155
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0147406
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0147392
RPL23 ribosomal protein L23 0.0147319
GMDS GDP-mannose 4,6-dehydratase 0.0146728
TSC22D2 TSC22 domain family, member 2 0.0146618
GABARAPL1 GABA(A) receptor-associated protein like 1 0.0146599
KANSL1L KAT8 regulatory NSL complex subunit 1-like 0.0144159
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0143964
RPS17 ribosomal protein S17 0.014291
BRD2 bromodomain containing 2 0.014251
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0141398
ANKRD33B ankyrin repeat domain 33B 0.0141094
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0140886
CPEB2 cytoplasmic polyadenylation element binding protein 2 0.0140721
CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3 0.0140256

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.263926
FNDC3B fibronectin type III domain containing 3B -0.132147
VIM vimentin -0.119937
TMSB10 thymosin beta 10 -0.104113
HMGA2 high mobility group AT-hook 2 -0.0827243
TAS2R14 taste receptor, type 2, member 14 -0.0798666
FLNB filamin B, beta -0.0765998
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0706219
NF1 neurofibromin 1 -0.0700023
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0652215
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0650515
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.06305
EFNA5 ephrin-A5 -0.0623177
CAPRIN2 caprin family member 2 -0.0609365
TPT1 tumor protein, translationally-controlled 1 -0.0597625
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0592305
AKAP13 A kinase (PRKA) anchor protein 13 -0.0574287
DNER delta/notch-like EGF repeat containing -0.0570087
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0564575
MACF1 microtubule-actin crosslinking factor 1 -0.055923
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0557306
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0548747
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0548127
ANKRD11 ankyrin repeat domain 11 -0.0546911
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0535297
ZMYND8 zinc finger, MYND-type containing 8 -0.0527059
THSD4 thrombospondin, type I, domain containing 4 -0.0525732
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0507543
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0497923
ANGPTL4 angiopoietin-like 4 -0.0493674
ATG7 autophagy related 7 -0.0493614
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.04917
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0490628
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0490178
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0489816
NT5E 5'-nucleotidase, ecto (CD73) -0.0488746
TM4SF1 transmembrane 4 L six family member 1 -0.0487174
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0477866
ACTN1 actinin, alpha 1 -0.0469323
ATM ATM serine/threonine kinase -0.0457678
NALCN sodium leak channel, non selective -0.0455599
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0453701
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0450031
SETD5 SET domain containing 5 -0.0447448
DST dystonin -0.0442051
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0441984
PTK2 protein tyrosine kinase 2 -0.0438502
ERBIN erbb2 interacting protein -0.0437093
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0436721
MCTP1 multiple C2 domains, transmembrane 1 -0.0436561
PDE8A phosphodiesterase 8A -0.0434184
LOC112694756 uncharaterized LOC112694756 -0.0433703
RBM39 RNA binding motif protein 39 -0.0433271
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.04325
RIN2 Ras and Rab interactor 2 -0.0430698
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0425317
BIRC6 baculoviral IAP repeat containing 6 -0.0425037
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0419247
ASPH aspartate beta-hydroxylase -0.0418358
PYGL phosphorylase, glycogen, liver -0.0417875
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0417713
NPAS2 neuronal PAS domain protein 2 -0.0409145
MT2A metallothionein 2A -0.0407357
PARD3 par-3 family cell polarity regulator -0.0404196
TPM4 tropomyosin 4 -0.039913
DOCK4 dedicator of cytokinesis 4 -0.0395367
NKTR natural killer cell triggering receptor -0.0393787
PCED1B PC-esterase domain containing 1B -0.0393071
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0392346
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0376843
ANKRD17 ankyrin repeat domain 17 -0.0374426
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0373977
TAOK1 TAO kinase 1 -0.03724
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0366215
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0365647
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0361737
IGF2 insulin-like growth factor 2 -0.0358857
LPP LIM domain containing preferred translocation partner in lipoma -0.035698
GPC6 glypican 6 -0.0356588
PRR16 proline rich 16 -0.0354657
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0352873
DERA deoxyribose-phosphate aldolase (putative) -0.0352622
NCOR1 nuclear receptor corepressor 1 -0.0352265
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0349028
TMEM263 transmembrane protein 263 -0.0345709
SEPTIN7 septin 7 -0.0343155
NDRG1 N-myc downstream regulated 1 -0.0340376
PCCA propionyl CoA carboxylase, alpha polypeptide -0.0340327
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.034004
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0336817
PBX3 pre-B-cell leukemia homeobox 3 -0.0335668
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0335613
NGLY1 N-glycanase 1 -0.0333445
ITCH itchy E3 ubiquitin protein ligase -0.0332361
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase -0.033229
ZBTB20 zinc finger and BTB domain containing 20 -0.0331649
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 -0.0329404
ATXN1 ataxin 1 -0.0328463
ZNF609 zinc finger protein 609 -0.0325008
SDC4 syndecan 4 -0.0325001