RNA polymerase V complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025
Category structural or functional annotations
Type cellular component
External Link http://amigo.geneontology.org/amigo/term/GO:0000419
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Genes

187 proteins co-occuring with the RNA polymerase V complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.

Symbol Name Standardized Value
AGO4 argonaute RISC catalytic component 4 3.354
AGO1 argonaute RISC catalytic component 1 2.27
DICER1 dicer 1, ribonuclease type III 2.162
MORC1 MORC family CW-type zinc finger 1 2.1
RDM1 RAD52 motif containing 1 1.79
PIWIL1 piwi-like RNA-mediated gene silencing 1 1.744
PIWIL4 piwi-like RNA-mediated gene silencing 4 1.727
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 1.697
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 1.645
AGO2 argonaute RISC catalytic component 2 1.644
DNMT1 DNA (cytosine-5-)-methyltransferase 1 1.637
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 1.612
H3C7 H3 clustered histone 7 1.528
H3-3B H3.3 histone B 1.526
H3-5 H3.5 histone 1.52
H3C13 H3 clustered histone 13 1.52
H3-7 H3.7 histone (putative) 1.52
H3-4 H3.4 histone, cluster member 1.519
DROSHA drosha, ribonuclease type III 1.505
AGO3 argonaute RISC catalytic component 3 1.479
MORC4 MORC family CW-type zinc finger 4 1.374
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 1.345
WDCP WD repeat and coiled coil containing 1.327
MORC2 MORC family CW-type zinc finger 2 1.301
DRD1 dopamine receptor D1 1.256
ANAPC10 anaphase promoting complex subunit 10 1.212
SRRT serrate, RNA effector molecule 1.196
EXOSC9 exosome component 9 1.178
TAF11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa 1.159
H2AZ1 H2A.Z variant histone 1 1.151
DMAP1 DNA methyltransferase 1 associated protein 1 1.145
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 1.122
SFPQ splicing factor proline/glutamine-rich 1.104
EXOSC6 exosome component 6 1.101
EXOSC7 exosome component 7 1.095
SRCAP Snf2-related CREBBP activator protein 1.091
H1-1 H1.1 linker histone, cluster member 1.088
PROK2 prokineticin 2 1.084
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 1.062
THOC3 THO complex 3 1.052
EXOSC5 exosome component 5 1.042
CHD3 chromodomain helicase DNA binding protein 3 1.026
H2AC7 H2A clustered histone 7 0.993
POLI polymerase (DNA directed) iota 0.992
EXOSC8 exosome component 8 0.983
HIC2 hypermethylated in cancer 2 0.955
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.944
EXOSC3 exosome component 3 0.939
CDC16 cell division cycle 16 0.937
MYB v-myb avian myeloblastosis viral oncogene homolog 0.932
NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6 0.931
MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 0.928
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.922
CD302 CD302 molecule 0.914
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.911
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.899
H1-2 H1.2 linker histone, cluster member 0.896
EXOSC1 exosome component 1 0.884
TOP1MT topoisomerase (DNA) I, mitochondrial 0.878
RNF41 ring finger protein 41, E3 ubiquitin protein ligase 0.877
H2AC20 H2A clustered histone 20 0.871
H2AC19 H2A clustered histone 19 0.87
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha 0.865
PDZD11 PDZ domain containing 11 0.863
ALYREF Aly/REF export factor 0.86
GUSB glucuronidase, beta 0.843
SCARA3 scavenger receptor class A, member 3 0.835
FAM72A family with sequence similarity 72, member A 0.835
CENPA centromere protein A 0.834
SLC7A6OS solute carrier family 7, member 6 opposite strand 0.834
H4C7 H4 clustered histone 7 0.831
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast) 0.83
PRDM16 PR domain containing 16 0.823
LGALS3 lectin, galactoside-binding, soluble, 3 0.821
DNMT3L DNA (cytosine-5-)-methyltransferase 3-like 0.818
H4C15 H4 clustered histone 15 0.813
RASGRF1 Ras protein-specific guanine nucleotide-releasing factor 1 0.81
U2AF2 U2 small nuclear RNA auxiliary factor 2 0.79
RNASE7 ribonuclease, RNase A family, 7 0.779
SETD1A SET domain containing 1A 0.771
LGALS7B lectin, galactoside-binding, soluble, 7B 0.764
HDAC1 histone deacetylase 1 0.761
HID1 HID1 domain containing 0.757
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein 0.752
WRAP53 WD repeat containing, antisense to TP53 0.752
UPF1 UPF1 regulator of nonsense transcripts homolog (yeast) 0.751
NSG2 neuronal vesicle trafficking associated 2 0.746
SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 0.745
DZIP3 DAZ interacting zinc finger protein 3 0.743
PIWIL2 piwi-like RNA-mediated gene silencing 2 0.743
CHD1 chromodomain helicase DNA binding protein 1 0.725
MTREX Mtr4 exosome RNA helicase 0.725
POLR2M polymerase (RNA) II (DNA directed) polypeptide M 0.721
RB1 retinoblastoma 1 0.718
PPP4R1 protein phosphatase 4, regulatory subunit 1 0.717
TRIM39 tripartite motif containing 39 0.717
TCEA3 transcription elongation factor A (SII), 3 0.717
UQCRFS1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 0.713
NCR3 natural cytotoxicity triggering receptor 3 0.713
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease 0.712
FXN frataxin 0.712
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 0.711
ZNF44 zinc finger protein 44 0.71
ZNF501 zinc finger protein 501 0.71
ZNF629 zinc finger protein 629 0.71
ZNF763 zinc finger protein 763 0.71
ZNF436 zinc finger protein 436 0.709
QSOX2 quiescin Q6 sulfhydryl oxidase 2 0.709
SKP1 S-phase kinase-associated protein 1 0.701
GTF2B general transcription factor IIB 0.7
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.697
PMS1 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) 0.697
H2BC21 H2B clustered histone 21 0.694
DHRS4 dehydrogenase/reductase (SDR family) member 4 0.689
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.688
ZNF569 zinc finger protein 569 0.685
MEX3B mex-3 RNA binding family member B 0.678
SETDB1 SET domain, bifurcated 1 0.677
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 0.675
TCEA1 transcription elongation factor A (SII), 1 0.665
TCF7 transcription factor 7 (T-cell specific, HMG-box) 0.664
SIGMAR1 sigma non-opioid intracellular receptor 1 0.663
ACOT8 acyl-CoA thioesterase 8 0.66
CDC5L cell division cycle 5-like 0.648
GOLPH3 golgi phosphoprotein 3 (coat-protein) 0.639
TOP1 topoisomerase (DNA) I 0.638
HOXA6 homeobox A6 0.638
RPL18A ribosomal protein L18a 0.635
SNUPN snurportin 1 0.63
MRPL13 mitochondrial ribosomal protein L13 0.614
SRP68 signal recognition particle 68kDa 0.612
PNLDC1 poly(A)-specific ribonuclease (PARN)-like domain containing 1 0.612
RBM14-RBM4 RBM14-RBM4 readthrough 0.6
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila) 0.6
PCGF3 polycomb group ring finger 3 0.596
TDRD9 tudor domain containing 9 0.595
TADA2B transcriptional adaptor 2B 0.59
SRP19 signal recognition particle 19kDa 0.589
NFYA nuclear transcription factor Y, alpha 0.588
THRAP3 thyroid hormone receptor associated protein 3 0.583
SWI5 SWI5 recombination repair homolog (yeast) 0.583
HDAC6 histone deacetylase 6 0.582
MAEL maelstrom spermatogenic transposon silencer 0.58
EXO1 exonuclease 1 0.58
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 0.573
TBPL2 TATA box binding protein like 2 0.573
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.568
RBM17 RNA binding motif protein 17 0.566
ZNF2 zinc finger protein 2 0.564
EIF3G eukaryotic translation initiation factor 3, subunit G 0.564
RBM25 RNA binding motif protein 25 0.561
TAF6 TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 0.558
EBF4 early B-cell factor 4 0.555
KMT2A lysine (K)-specific methyltransferase 2A 0.552
EHMT2 euchromatic histone-lysine N-methyltransferase 2 0.552
GZMM granzyme M (lymphocyte met-ase 1) 0.548
CHD7 chromodomain helicase DNA binding protein 7 0.548
FBXO2 F-box protein 2 0.541
CNOT6 CCR4-NOT transcription complex, subunit 6 0.54
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) 0.538
HIRA histone cell cycle regulator 0.537
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.534
MMP11 matrix metallopeptidase 11 0.533
EGLN3 egl-9 family hypoxia-inducible factor 3 0.532
CNOT2 CCR4-NOT transcription complex, subunit 2 0.532
NONO non-POU domain containing, octamer-binding 0.53
BCKDHA branched chain keto acid dehydrogenase E1, alpha polypeptide 0.529
LSM2 LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.528
TNRC6A trinucleotide repeat containing 6A 0.528
SRP9 signal recognition particle 9kDa 0.528
SRP72 signal recognition particle 72kDa 0.528
EGLN2 egl-9 family hypoxia-inducible factor 2 0.527
SRMS src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites 0.527
TAAR9 trace amine associated receptor 9 (gene/pseudogene) 0.525
ATP5F1A ATP synthase F1 subunit alpha 0.523
CTCF CCCTC-binding factor (zinc finger protein) 0.521
EDF1 endothelial differentiation-related factor 1 0.521
TAL1 T-cell acute lymphocytic leukemia 1 0.519
LLGL1 lethal giant larvae homolog 1 (Drosophila) 0.518
TAF12 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa 0.517
SRSF1 serine/arginine-rich splicing factor 1 0.517
REG4 regenerating islet-derived family, member 4 0.509
DET1 de-etiolated homolog 1 (Arabidopsis) 0.509
ANAPC11 anaphase promoting complex subunit 11 0.507
PRKRA protein kinase, interferon-inducible double stranded RNA dependent activator 0.506
AP1M1 adaptor-related protein complex 1, mu 1 subunit 0.505
P3H3 prolyl 3-hydroxylase 3 0.502