RPMI8226 Gene Set

Dataset CCLE Cell Line Gene CNV Profiles
Category genomics
Type cell line
Similar Terms
Downloads & Tools

Genes

709 genes with high or low copy number in RPMI8226 relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
VWC2L von Willebrand factor C domain containing protein 2-like 3.2803
PML promyelocytic leukemia 3.27546
JAK1 Janus kinase 1 2.79417
VWC2L-IT1 VWC2L intronic transcript 1 2.6472
LRP1B low density lipoprotein receptor-related protein 1B 2.45638
MIR3679 microRNA 3679 2.27361
COL9A1 collagen, type IX, alpha 1 2.22393
COL19A1 collagen, type XIX, alpha 1 2.2209
MNS1 meiosis-specific nuclear structural 1 2.16622
TEX9 testis expressed 9 2.16609
SPATA45 spermatogenesis associated 45 2.1495
RFX7 regulatory factor X, 7 2.13965
RSL24D1 ribosomal L24 domain containing 1 2.13025
MIR628 microRNA 628 2.11661
C15ORF65 chromosome 15 open reading frame 65 2.11621
DYX1C1 dyslexia susceptibility 1 candidate 1 2.1148
FAM135A family with sequence similarity 135, member A 2.10557
PIGB phosphatidylinositol glycan anchor biosynthesis, class B 2.09892
CCPG1 cell cycle progression 1 2.09779
DYX1C1-CCPG1 DYX1C1-CCPG1 readthrough (NMD candidate) 2.09626
MIR3680-2 microRNA 3680-2 2.09483
MIR3680-1 microRNA 3680-1 2.09483
OGFRL1 opioid growth factor receptor-like 1 2.08388
RIMS1 regulating synaptic membrane exocytosis 1 2.07848
MIR4282 microRNA 4282 2.051
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 2.04195
APPL2 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 2.0296
CD109 CD109 molecule 2.02914
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 2.02913
KHDC3L KH domain containing 3-like, subcortical maternal complex member 2.02913
DDX43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 2.02913
OOEP oocyte expressed protein 2.02913
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5 2.02906
KHDC1 KH homology domain containing 1 2.02825
KHDC1L KH homology domain containing 1-like 2.02825
DPPA5 developmental pluripotency associated 5 2.02825
KCNQ5-AS1 KCNQ5 antisense RNA 1 2.02711
RAB27A RAB27A, member RAS oncogene family 2.02516
PYGO1 pygopus family PHD finger 1 2.02287
PRTG protogenin 2.02227
MIR30A microRNA 30a 2.02005
MIR30C2 microRNA 30c-2 2.01998
LINC00472 long intergenic non-protein coding RNA 472 2.01981
SDHAF4 succinate dehydrogenase complex assembly factor 4 2.01439
MB21D1 Mab-21 domain containing 1 1.95369
MTO1 mitochondrial tRNA translation optimization 1 1.95368
MLF2 myeloid leukemia factor 2 1.94468
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 1.9414
SMAP1 small ArfGAP 1 1.92655
B3GAT2 beta-1,3-glucuronyltransferase 2 1.9251
SSX7 synovial sarcoma, X breakpoint 7 1.92435
SSX8 synovial sarcoma, X breakpoint 8 1.9243
PKD1P1 polycystic kidney disease 1 (autosomal dominant) pseudogene 1 1.80523
CNTN5 contactin 5 1.78573
WDR72 WD repeat domain 72 1.76109
UNC13C unc-13 homolog C (C. elegans) 1.75517
HSF2BP heat shock transcription factor 2 binding protein 1.74044
NDUFAF4P1 NADH dehydrogenase (ubiquinone) complex I, assembly factor 4 pseudogene 1 1.71003
COPS2 COP9 signalosome subunit 2 1.71003
MIR4716 microRNA 4716 1.70989
LOC145837 1.70171
TLE3 transducin-like enhancer of split 3 1.70121
MIR629 microRNA 629 1.70121
LINC00593 long intergenic non-protein coding RNA 593 1.70093
SLC12A1 solute carrier family 12 (sodium/potassium/chloride transporter), member 1 1.70022
CTXN2 cortexin 2 1.69954
SECISBP2L SECIS binding protein 2-like 1.69948
RPLP1 ribosomal protein, large, P1 1.68582
KIF23 kinesin family member 23 1.68569
EWSAT1 Ewing sarcoma associated transcript 1 1.68468
DUT deoxyuridine triphosphatase 1.68124
FBN1 fibrillin 1 1.66761
SLC24A5 solute carrier family 24 (sodium/potassium/calcium exchanger), member 5 1.66261
MYEF2 myelin expression factor 2 1.66223
PAQR5 progestin and adipoQ receptor family member V 1.65721
EID1 EP300 interacting inhibitor of differentiation 1 1.65701
CEP152 centrosomal protein 152kDa 1.65679
SHC4 SHC (Src homology 2 domain containing) family, member 4 1.65673
HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 1.65445
SPESP1 sperm equatorial segment protein 1 1.64991
HEXA-AS1 HEXA antisense RNA 1 1.64897
NEO1 neogenin 1 1.6327
THAP10 THAP domain containing 10 1.6228
LARP6 La ribonucleoprotein domain family, member 6 1.6228
TMEM202 transmembrane protein 202 1.61922
GLCE glucuronic acid epimerase 1.61785
GALK2 galactokinase 2 1.61376
MIR630 microRNA 630 1.6115
HEXA hexosaminidase A (alpha polypeptide) 1.61121
REC114 REC114 meiotic recombination protein 1.60929
NPTN neuroplastin 1.60919
ADPGK-AS1 ADPGK antisense RNA 1 1.60911
HIGD2B HIG1 hypoxia inducible domain family, member 2B 1.60892
C15ORF59 chromosome 15 open reading frame 59 1.60877
CD276 CD276 molecule 1.60877
TBC1D21 TBC1 domain family, member 21 1.60872
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 1.60731
STOML1 stomatin (EPB72)-like 1 1.59786
LOXL1 lysyl oxidase-like 1 1.59343
LOXL1-AS1 LOXL1 antisense RNA 1 1.59343
CELF6 CUGBP, Elav-like family member 6 1.58522
PKM pyruvate kinase, muscle 1.58499
PARP6 poly (ADP-ribose) polymerase family, member 6 1.58485
FGF7 fibroblast growth factor 7 1.58303
DTWD1 DTW domain containing 1 1.58232
GOLGA6B golgin A6 family, member B 1.58182
SENP8 SUMO/sentrin specific peptidase family member 8 1.58176
NR2E3 nuclear receptor subfamily 2, group E, member 3 1.58082
GRAMD2 GRAM domain containing 2 1.57878
BBS4 Bardet-Biedl syndrome 4 1.57785
ADPGK ADP-dependent glucokinase 1.57785
FAM227B family with sequence similarity 227, member B 1.56376
MYO9A myosin IXA 1.56339
MIR1266 microRNA 1266 1.54205
GNB5 guanine nucleotide binding protein (G protein), beta 5 1.54192
HDC histidine decarboxylase 1.54075
SLC27A2 solute carrier family 27 (fatty acid transporter), member 2 1.54072
BCL2L10 BCL2-like 10 (apoptosis facilitator) 1.53722
ATP8B4 ATPase, class I, type 8B, member 4 1.5288
LRRC49 leucine rich repeat containing 49 1.52002
CT62 cancer/testis antigen 62 1.51988
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 1.51547
MYO5C myosin VC 1.51528
FAM63B family with sequence similarity 63, member B 1.51292
LYSMD2 LysM, putative peptidoglycan-binding, domain containing 2 1.51103
TMOD2 tropomodulin 2 (neuronal) 1.5108
LEO1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 1.51068
TMOD3 tropomodulin 3 (ubiquitous) 1.51067
MAPK6 mitogen-activated protein kinase 6 1.51053
AP4E1 adaptor-related protein complex 4, epsilon 1 subunit 1.50772
DCAF13P3 DDB1 and CUL4 associated factor 13 pseudogene 3 1.50772
HSP90AB4P heat shock protein 90kDa alpha (cytosolic), class B member 4, pseudogene 1.50332
SLTM SAFB-like, transcription modulator 1.49903
FAM81A family with sequence similarity 81, member A 1.49657
BNIP2 BCL2/adenovirus E1B 19kDa interacting protein 2 1.49315
GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type 1.49305
GTF2A2 general transcription factor IIA, 2, 12kDa 1.49275
ZNF280D zinc finger protein 280D 1.4919
SCG3 secretogranin III 1.49006
DMXL2 Dmx-like 2 1.49001
FLJ10038 uncharacterized protein FLJ10038 1.4896
GABPB1-AS1 GABPB1 antisense RNA 1 1.48958
MIR4712 microRNA 4712 1.48958
NOMO3 NODAL modulator 3 1.48939
GABPB1 GA binding protein transcription factor, beta subunit 1 1.48935
MIR2116 microRNA 2116 1.48524
LDHAL6B lactate dehydrogenase A-like 6B 1.48503
MYLIP myosin regulatory light chain interacting protein 1.4828
MIR4639 microRNA 4639 1.4828
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 1.47879
FOXQ1 forkhead box Q1 1.47728
ONECUT1 one cut homeobox 1 1.47707
RNF111 ring finger protein 111 1.47501
GLDN gliomedin 1.4739
FOXB1 forkhead box B1 1.47375
MIR4713 microRNA 4713 1.4729
TIPE3 TNF alpha induced protein 8 like 3 1.47288
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1 1.47278
CCNB2 cyclin B2 1.4718
LOC145783 uncharacterized LOC145783 1.47113
FOXF2 forkhead box F2 1.47026
AQP9 aquaporin 9 1.46892
ARPP19 cAMP-regulated phosphoprotein, 19kDa 1.46832
MIR4645 microRNA 4645 1.46827
MYO5A myosin VA (heavy chain 12, myoxin) 1.46775
NRN1 neuritin 1 1.46706
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 1.46285
MYO1E myosin IE 1.46136
STMND1 stathmin domain containing 1 1.45847
MIR3691 microRNA 3691 1.45631
GMPR guanosine monophosphate reductase 1.45555
PPP1R3G protein phosphatase 1, regulatory subunit 3G 1.45421
GMDS-AS1 GMDS antisense RNA 1 (head to head) 1.45334
LYRM4 LYR motif containing 4 1.45248
USP8 ubiquitin specific peptidase 8 1.45184
RPP40 ribonuclease P/MRP 40kDa subunit 1.45
RBPMS2 RNA binding protein with multiple splicing 2 1.44867
MIR1272 microRNA 1272 1.44867
PIF1 PIF1 5'-to-3' DNA helicase 1.44853
PLEKHO2 pleckstrin homology domain containing, family O member 2 1.44853
TRPM7 transient receptor potential cation channel, subfamily M, member 7 1.4466
SPPL2A signal peptide peptidase like 2A 1.44659
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 1.4452
LINC01600 long intergenic non-protein coding RNA 1600 1.44494
ADAM10 ADAM metallopeptidase domain 10 1.44364
FAM214A family with sequence similarity 214, member A 1.43923
ECI2 enoyl-CoA delta isomerase 2 1.4391
DTNBP1 dystrobrevin binding protein 1 1.43842
C2CD4A C2 calcium-dependent domain containing 4A 1.43677
FOXC1 forkhead box C1 1.43585
PRPF4B pre-mRNA processing factor 4B 1.43303
FAM217A family with sequence similarity 217, member A 1.43295
FAM50B family with sequence similarity 50, member B 1.43289
C6ORF201 chromosome 6 open reading frame 201 1.43266
ID4 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein 1.4322
P2RY13 purinergic receptor P2Y, G-protein coupled, 13 1.43213
LOC100130357 uncharacterized LOC100130357 1.43108
TBC1D7 TBC1 domain family, member 7 1.43108
USP50 ubiquitin specific peptidase 50 1.43038
CPA3 carboxypeptidase A3 (mast cell) 1.43023
CPB1 carboxypeptidase B1 (tissue) 1.42993
IGDCC3 immunoglobulin superfamily, DCC subclass, member 3 1.42858
AGTR1 angiotensin II receptor, type 1 1.42825
PDCD7 programmed cell death 7 1.42786
KBTBD13 kelch repeat and BTB (POZ) domain containing 13 1.42781
UBAP1L ubiquitin associated protein 1-like 1.42781
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 1.42781
SPG21 spastic paraplegia 21 (autosomal recessive, Mast syndrome) 1.42777
ANKDD1A ankyrin repeat and death domain containing 1A 1.42772
ATXN1 ataxin 1 1.42771
POLR2M polymerase (RNA) II (DNA directed) polypeptide M 1.4277
OAZ2 ornithine decarboxylase antizyme 2 1.42716
KIAA0101 KIAA0101 1.42716
TRIP4 thyroid hormone receptor interactor 4 1.42716
ZNF609 zinc finger protein 609 1.42621
CILP cartilage intermediate layer protein, nucleotide pyrophosphohydrolase 1.42611
SERPINB9P1 serpin peptidase inhibitor, clade B (ovalbumin), member 9, pseudogene 1 1.42528
WRNIP1 Werner helicase interacting protein 1 1.42496
MBOAT1 membrane bound O-acyltransferase domain containing 1 1.42296
TUBB2B tubulin, beta 2B class IIb 1.42231
TUBB2A tubulin, beta 2A class IIa 1.42175
LOC100507194 uncharacterized LOC100507194 1.42175
BPHL biphenyl hydrolase-like (serine hydrolase) 1.42171
ICE2 interactor of little elongation complex ELL subunit 2 1.41912
CDYL chromodomain protein, Y-like 1.4189
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 1.4175
LINC01011 long intergenic non-protein coding RNA 1011 1.4175
SIAH2 siah E3 ubiquitin protein ligase 2 1.41742
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 1.4163
CD83 CD83 molecule 1.41496
MCUR1 mitochondrial calcium uniporter regulator 1 1.41478
RANBP9 RAN binding protein 9 1.41463
NOL7 nucleolar protein 7, 27kDa 1.41463
TCF12 transcription factor 12 1.41444
MTFMT mitochondrial methionyl-tRNA formyltransferase 1.41367
SLC35B3 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 1.41367
RASL12 RAS-like, family 12 1.41363
SLC51B solute carrier family 51, beta subunit 1.41363
GFOD1 glucose-fructose oxidoreductase domain containing 1 1.41236
GPR87 G protein-coupled receptor 87 1.41133
GPR171 G protein-coupled receptor 171 1.41129
P2RY14 purinergic receptor P2Y, G-protein coupled, 14 1.41095
TMEM14E transmembrane protein 14E 1.41066
C2CD4B C2 calcium-dependent domain containing 4B 1.41003
MYZAP myocardial zonula adherens protein 1.4086
RBM24 RNA binding motif protein 24 1.40856
IGDCC4 immunoglobulin superfamily, DCC subclass, member 4 1.40852
P2RY12 purinergic receptor P2Y, G-protein coupled, 12 1.40805
GCOM1 GRINL1A complex locus 1 1.40804
MBNL1-AS1 MBNL1 antisense RNA 1 1.40782
HULC hepatocellular carcinoma up-regulated long non-coding RNA 1.40747
PARP16 poly (ADP-ribose) polymerase family, member 16 1.40715
LINC00926 long intergenic non-protein coding RNA 926 1.40641
LIPC lipase, hepatic 1.40636
F13A1 coagulation factor XIII, A1 polypeptide 1.40624
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1 1.4051
HTATSF1P2 HIV-1 Tat specific factor 1 pseudogene 2 1.40491
WWTR1-AS1 WWTR1 antisense RNA 1 1.40471
GYG1 glycogenin 1 1.40409
LOC100506207 uncharacterized LOC100506207 1.40364
NQO2 NAD(P)H dehydrogenase, quinone 2 1.40299
MGC15885 uncharacterized protein MGC15885 1.40277
MYLK4 myosin light chain kinase family, member 4 1.40218
IGSF10 immunoglobulin superfamily, member 10 1.40104
MIR5186 microRNA 5186 1.4007
AADACL2 arylacetamide deacetylase-like 2 1.40028
PSMG4 proteasome (prosome, macropain) assembly chaperone 4 1.40013
RNF182 ring finger protein 182 1.3974
LOC285768 uncharacterized LOC285768 1.39707
ERICH6 glutamate-rich 6 1.39696
PHACTR1 phosphatase and actin regulator 1 1.39651
HUS1B HUS1 checkpoint homolog b (S. pombe) 1.39614
CLRN1 clarin 1 1.39566
CLRN1-AS1 CLRN1 antisense RNA 1 1.39555
SNORD16 small nucleolar RNA, C/D box 16 1.39538
RPL4 ribosomal protein L4 1.39538
SNORD18A small nucleolar RNA, C/D box 18A 1.39538
SNORD18C small nucleolar RNA, C/D box 18C 1.39538
SNORD18B small nucleolar RNA, C/D box 18B 1.39538
SIRT5 sirtuin 5 1.3941
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 1.39389
PFN2 profilin 2 1.39383
LOC646903 uncharacterized LOC646903 1.39383
SSR1 signal sequence receptor, alpha 1.39362
SNRNP48 small nuclear ribonucleoprotein 48kDa (U11/U12) 1.39357
DSP desmoplakin 1.39328
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 1.3931
RAB11A RAB11A, member RAS oncogene family 1.39221
PXDC1 PX domain containing 1 1.39187
C3ORF79 chromosome 3 open reading frame 79 1.39122
MIR4311 microRNA 4311 1.38915
CGNL1 cingulin-like 1 1.38581
IRF4 interferon regulatory factor 4 1.38493
HLTF-AS1 HLTF antisense RNA 1 1.38471
HLTF helicase-like transcription factor 1.38471
RNF13 ring finger protein 13 1.38448
MIR190A microRNA 190a 1.38335
EDN1 endothelin 1 1.38271
AADACP1 arylacetamide deacetylase pseudogene 1 1.38236
WWTR1 WW domain containing transcription regulator 1 1.38097
TM4SF4 transmembrane 4 L six family member 4 1.38092
HPS3 Hermansky-Pudlak syndrome 3 1.38056
SNAPC5 small nuclear RNA activating complex, polypeptide 5, 19kDa 1.37612
SCARNA14 small Cajal body-specific RNA 14 1.37607
MAK male germ cell-associated kinase 1.37601
CAP2 CAP, adenylate cyclase-associated protein, 2 (yeast) 1.37596
TMEM14B transmembrane protein 14B 1.37573
TMEM14C transmembrane protein 14C 1.3757
TFAP2A-AS1 TFAP2A antisense RNA 1 1.37496
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 1.37496
GMDS GDP-mannose 4,6-dehydratase 1.37458
ARHGEF26 Rho guanine nucleotide exchange factor (GEF) 26 1.37449
BMP6 bone morphogenetic protein 6 1.37418
EIF2A eukaryotic translation initiation factor 2A, 65kDa 1.37415
SERP1 stress-associated endoplasmic reticulum protein 1 1.37415
DIS3L DIS3 like exosome 3'-5' exoribonuclease 1.37411
P2RY1 purinergic receptor P2Y, G-protein coupled, 1 1.37378
SYCP2L synaptonemal complex protein 2-like 1.37304
GCM2 glial cells missing homolog 2 (Drosophila) 1.37284
ANKUB1 ankyrin repeat and ubiquitin domain containing 1 1.37278
COMMD2 COMM domain containing 2 1.37278
C6ORF52 chromosome 6 open reading frame 52 1.37261
TIPIN TIMELESS interacting protein 1.37238
TM4SF1 transmembrane 4 L six family member 1 1.37092
VWA9 von Willebrand factor A domain containing 9 1.36975
ISL2 ISL LIM homeobox 2 1.36899
MED12L mediator complex subunit 12-like 1.36878
DPP8 dipeptidyl-peptidase 8 1.36865
SNX22 sorting nexin 22 1.36848
PPIB peptidylprolyl isomerase B (cyclophilin B) 1.36842
SNX1 sorting nexin 1 1.36802
MBNL1 muscleblind-like splicing regulator 1 1.36777
TLN2 talin 2 1.36768
FAM8A1 family with sequence similarity 8, member A1 1.36698
LACTB lactamase, beta 1.36537
RPS27L ribosomal protein S27-like 1.36522
MIR4511 microRNA 4511 1.36493
APH1B APH1B gamma secretase subunit 1.36316
CP ceruloplasmin (ferroxidase) 1.3631
MIR548A1 microRNA 548a-1 1.36302
CA12 carbonic anhydrase XII 1.36281
MIR5689 microRNA 5689 1.361
LINC00518 long intergenic non-protein coding RNA 518 1.361
KDM1B lysine (K)-specific demethylase 1B 1.36071
AADAC arylacetamide deacetylase 1.35945
ARHGEF26-AS1 ARHGEF26 antisense RNA 1 1.3586
ADTRP androgen-dependent TFPI-regulating protein 1.35803
RAP2B RAP2B, member of RAS oncogene family 1.35765
SMAD6 SMAD family member 6 1.3575
MAP2K1 mitogen-activated protein kinase kinase 1 1.35746
TM4SF18 transmembrane 4 L six family member 18 1.35726
SEMA6D sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 1.35719
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 1.35694
LCTL lactase-like 1.35684
ZWILCH zwilch kinetochore protein 1.35679
ERVFRD-1 endogenous retrovirus group FRD, member 1 1.35661
SMIM13 small integral membrane protein 13 1.35647
USP3-AS1 USP3 antisense RNA 1 1.35638
FBXL22 F-box and leucine-rich repeat protein 22 1.35638
C15ORF61 chromosome 15 open reading frame 61 1.3562
IQCH-AS1 IQCH antisense RNA 1 1.35609
IQCH IQ motif containing H 1.35585
TSC22D2 TSC22 domain family, member 2 1.35538
RREB1 ras responsive element binding protein 1 1.35485
SCARNA27 small Cajal body-specific RNA 27 1.35442
EEF1E1 eukaryotic translation elongation factor 1 epsilon 1 1.35421
ELOVL2 ELOVL fatty acid elongase 2 1.35401
ELOVL2-AS1 ELOVL2 antisense RNA 1 1.35293
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) 1.35091
CSNK1G1 casein kinase 1, gamma 1 1.34928
FEM1B fem-1 homolog b (C. elegans) 1.34894
NUP153 nucleoporin 153kDa 1.34867
ITGA11 integrin, alpha 11 1.34843
FAM96A family with sequence similarity 96, member A 1.34825
BLOC1S5 biogenesis of lysosomal organelles complex-1, subunit 5, muted 1.3482
EEF1E1-BLOC1S5 EEF1E1-BLOC1S5 readthrough (NMD candidate) 1.3482
PIP5K1P1 phosphatidylinositol-4-phosphate 5-kinase, type I, pseudogene 1 1.34816
TPM1 tropomyosin 1 (alpha) 1.34809
GPR149 G protein-coupled receptor 149 1.34772
TXNDC5 thioredoxin domain containing 5 (endoplasmic reticulum) 1.34762
RAB8B RAB8B, member RAS oncogene family 1.34712
SUCNR1 succinate receptor 1 1.34688
SLC24A1 solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 1.3462
DENND4A DENN/MADD domain containing 4A 1.3459
BLOC1S5-TXNDC5 BLOC1S5-TXNDC5 readthrough (NMD candidate) 1.34587
ANXA2 annexin A2 1.34405
NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 1.34282
TPMT thiopurine S-methyltransferase 1.34282
TMEM170B transmembrane protein 170B 1.3425
DUSP22 dual specificity phosphatase 22 1.3403
PAK1IP1 PAK1 interacting protein 1 1.33931
AAGAB alpha- and gamma-adaptin binding protein 1.33911
SELT selenoprotein T 1.33905
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 1.3388
DAPK2 death-associated protein kinase 2 1.33674
MEGF11 multiple EGF-like-domains 11 1.33654
E2F3 E2F transcription factor 3 1.33599
MME membrane metallo-endopeptidase 1.33558
RNF144B ring finger protein 144B 1.33387
TYRO3P TYRO3P protein tyrosine kinase pseudogene 1.33319
SLC22A23 solute carrier family 22, member 23 1.3328
RIOK1 RIO kinase 1 1.33248
CALML4 calmodulin-like 4 1.33233
SERPINI2 serpin peptidase inhibitor, clade I (pancpin), member 2 1.33146
SLITRK3 SLIT and NTRK-like family, member 3 1.33108
USP3 ubiquitin specific peptidase 3 1.33031
FBXO22-AS1 FBXO22 antisense RNA 1 1.32935
NRG4 neuregulin 4 1.32935

low copy number

Symbol Name Standardized Value
PARP9 poly (ADP-ribose) polymerase family, member 9 -3.21049
MIR5705 microRNA 5705 -3.21049
ABHD17B abhydrolase domain containing 17B -3.21049
CDC42BPB CDC42 binding protein kinase beta (DMPK-like) -3.21049
BRWD3 bromodomain and WD repeat domain containing 3 -3.21049
C9ORF85 chromosome 9 open reading frame 85 -3.21049
JPX JPX transcript, XIST activator (non-protein coding) -3.21049
HSD17B2 hydroxysteroid (17-beta) dehydrogenase 2 -3.21049
KCTD8 potassium channel tetramerization domain containing 8 -3.21049
AMN amnion associated transmembrane protein -3.21049
CARS2 cysteinyl-tRNA synthetase 2, mitochondrial (putative) -3.21049
LINC00571 long intergenic non-protein coding RNA 571 -3.21049
LOC145845 uncharacterized LOC145845 -3.2093
CSNK1A1P1 casein kinase 1, alpha 1 pseudogene 1 -3.20927
MIR4510 microRNA 4510 -3.20917
ANP32AP1 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A pseudogene 1 -3.20915
MIR3942 microRNA 3942 -3.20604
SPAG11A sperm associated antigen 11A -3.20215
DPH6 diphthamine biosynthesis 6 -2.91338
SOAT1 sterol O-acyltransferase 1 -2.86552
YPEL1 yippee-like 1 (Drosophila) -2.78652
SERPIND1 serpin peptidase inhibitor, clade D (heparin cofactor), member 1 -2.77928
POM121L4P POM121 transmembrane nucleoporin-like 4 pseudogene -2.7557
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like -2.75225
UFD1L ubiquitin fusion degradation 1 like (yeast) -2.73684
CLRN3 clarin 3 -2.72805
SNAP29 synaptosomal-associated protein, 29kDa -2.72744
FOXI2 forkhead box I2 -2.72732
NPS neuropeptide S -2.72732
RWDD2A RWD domain containing 2A -2.72692
PGM3 phosphoglucomutase 3 -2.72683
MRPL40 mitochondrial ribosomal protein L40 -2.72536
C22ORF39 chromosome 22 open reading frame 39 -2.72536
MKI67 marker of proliferation Ki-67 -2.72024
CLDN5 claudin 5 -2.70559
LINC00895 long intergenic non-protein coding RNA 895 -2.70548
KLHL22 kelch-like family member 22 -2.70196
DGCR6L DiGeorge syndrome critical region gene 6-like -2.7014
MIR1286 microRNA 1286 -2.70132
RTN4R reticulon 4 receptor -2.70087
GP1BB glycoprotein Ib (platelet), beta polypeptide -2.64734
SEPT5-GP1BB SEPT5-GP1BB readthrough -2.6471
SEPT5 septin 5 -2.6471
CFH complement factor H -2.62732
UBE2K ubiquitin-conjugating enzyme E2K -2.59447
GPC5 glypican 5 -2.59447
CHD8 chromodomain helicase DNA binding protein 8 -2.59447
GYPB glycophorin B (MNS blood group) -2.59443
TAOK1 TAO kinase 1 -2.5906
C15ORF41 chromosome 15 open reading frame 41 -2.58831
ZDHHC23 zinc finger, DHHC-type containing 23 -2.58692
KIAA1407 KIAA1407 -2.5861
LINC01106 long intergenic non-protein coding RNA 1106 -2.56299
PEX26 peroxisomal biogenesis factor 26 -2.52624
TUBA8 tubulin, alpha 8 -2.52586
MEIS2 Meis homeobox 2 -2.50307
MIR301B microRNA 301b -2.48187
MIR130B microRNA 130b -2.48187
PPM1F protein phosphatase, Mg2+/Mn2+ dependent, 1F -2.47963
MIR648 microRNA 648 -2.46341
FLJ41941 uncharacterized LOC100192420 -2.46318
ATP6V1E1 ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 -2.46316
CECR2 cat eye syndrome chromosome region, candidate 2 -2.45637
TMEM191A transmembrane protein 191A (pseudogene) -2.45404
THOC3 THO complex 3 -2.44858
TSSK2 testis-specific serine kinase 2 -2.42032
DGCR14 DiGeorge syndrome critical region gene 14 -2.42032
ZNF74 zinc finger protein 74 -2.41072
MIR3198-1 microRNA 3198-1 -2.40283
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 -2.40213
DGCR11 DiGeorge syndrome critical region gene 11 (non-protein coding) -2.37823
TBX1 T-box 1 -2.36835
PPP1R15B protein phosphatase 1, regulatory subunit 15B -2.3514
TRAF3 TNF receptor-associated factor 3 -2.3514
HS6ST2 heparan sulfate 6-O-sulfotransferase 2 -2.3514
GNPDA2 glucosamine-6-phosphate deaminase 2 -2.3514
CECR5-AS1 CECR5 antisense RNA 1 -2.33943
CECR6 cat eye syndrome chromosome region, candidate 6 -2.3378
CECR3 cat eye syndrome chromosome region, candidate 3 (non-protein coding) -2.33768
CTAGE7P CTAGE family, member 7, pseudogene -2.32592
MIR4297 microRNA 4297 -2.32592
GLRX3 glutaredoxin 3 -2.32588
PTPRE protein tyrosine phosphatase, receptor type, E -2.31296
PRAP1 proline-rich acidic protein 1 -2.30117
ECHS1 enoyl CoA hydratase, short chain, 1, mitochondrial -2.30117
MIR3944 microRNA 3944 -2.30117
CALY calcyon neuron-specific vesicular protein -2.30117
FUOM fucose mutarotase -2.30117
SPRN shadow of prion protein homolog (zebrafish) -2.30112
TUBGCP2 tubulin, gamma complex associated protein 2 -2.3011
ZNF511 zinc finger protein 511 -2.3011
SCART1 scavenger receptor protein family member -2.29992
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic -2.29436
SDF2L1 stromal cell-derived factor 2-like 1 -2.29352
YDJC YdjC homolog (bacterial) -2.29074
MIR4761 microRNA 4761 -2.28323
TRPC3 transient receptor potential cation channel, subfamily C, member 3 -2.27346
MIR378C microRNA 378c -2.2616
GSC2 goosecoid homeobox 2 -2.25571
SCARF2 scavenger receptor class F, member 2 -2.24745
BID BH3 interacting domain death agonist -2.24653
UBE2L3 ubiquitin-conjugating enzyme E2L 3 -2.23955
DGCR10 DiGeorge syndrome critical region gene 10 (non-protein coding) -2.21651
DGCR9 DiGeorge syndrome critical region gene 9 (non-protein coding) -2.21583
HSFY1P1 heat shock transcription factor, Y-linked 1 pseudogene 1 -2.2101
GRAMD1C GRAM domain containing 1C -2.20603
FAM163A family with sequence similarity 163, member A -2.20312
PCSK5 proprotein convertase subtilisin/kexin type 5 -2.20309
CECR5 cat eye syndrome chromosome region, candidate 5 -2.19724
CECR1 cat eye syndrome chromosome region, candidate 1 -2.19609
IL17RA interleukin 17 receptor A -2.19609
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -2.19187
LINC01164 long intergenic non-protein coding RNA 1164 -2.19187
PPP2R2D protein phosphatase 2, regulatory subunit B, delta -2.19185
LINC00959 long intergenic non-protein coding RNA 959 -2.1896
EBF3 early B-cell factor 3 -2.1896
BCL2L13 BCL2-like 13 (apoptosis facilitator) -2.18467
ADAM8 ADAM metallopeptidase domain 8 -2.17262
LINC01168 long intergenic non-protein coding RNA 1168 -2.17258
NKX6-2 NK6 homeobox 2 -2.17256
PWWP2B PWWP domain containing 2B -2.17239
C10ORF91 chromosome 10 open reading frame 91 -2.17237
LINC00226 long intergenic non-protein coding RNA 226 -2.12098
CECR7 cat eye syndrome chromosome region, candidate 7 (non-protein coding) -2.11942
DGCR2 DiGeorge syndrome critical region gene 2 -2.11836
MFHAS1 malignant fibrous histiocytoma amplified sequence 1 -2.11254
TRIO trio Rho guanine nucleotide exchange factor -2.09317
GPM6A glycoprotein M6A -2.09288
LMNTD1 lamin tail domain containing 1 -2.08627
ADGRA1 adhesion G protein-coupled receptor A1 -2.071
LRRC27 leucine rich repeat containing 27 -2.07092
COMT catechol-O-methyltransferase -2.04603
MED15 mediator complex subunit 15 -2.04174
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -2.0213
LIMCH1 LIM and calponin homology domains 1 -2.01953
ZNF280A zinc finger protein 280A -2.01925
ZNF280B zinc finger protein 280B -2.0192
CDH13 cadherin 13 -2.01868
GAB4 GRB2-associated binding protein family, member 4 -2.01392
COL6A3 collagen, type VI, alpha 3 -2.01056
DGCR5 DiGeorge syndrome critical region gene 5 (non-protein coding) -2.00915
MGMT O-6-methylguanine-DNA methyltransferase -2.00327
SGCG sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein) -2.00102
USP18 ubiquitin specific peptidase 18 -1.99485
TMEM191B transmembrane protein 191B -1.98899
PI4KAP1 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1 -1.98899
RIMBP3 RIMS binding protein 3 -1.98787
BMS1P20 BMS1 ribosome biogenesis factor pseudogene 20 -1.98656
CCDC116 coiled-coil domain containing 116 -1.98034
TUBA3FP tubulin, alpha 3f, pseudogene -1.97726
P2RX6P purinergic receptor P2X, ligand gated ion channel, 6 pseudogene -1.97726
P2RX6 purinergic receptor P2X, ligand gated ion channel, 6 -1.97726
SLC7A4 solute carrier family 7, member 4 -1.97726
TOP3B topoisomerase (DNA) III beta -1.9767
MIR185 microRNA 185 -1.97569
DPYSL4 dihydropyrimidinase-like 4 -1.97363
CDC45 cell division cycle 45 -1.96269
LOC648691 -1.94153
PRAME preferentially expressed antigen in melanoma -1.94153
PAOX polyamine oxidase (exo-N4-amino) -1.91456
KNDC1 kinase non-catalytic C-lobe domain (KIND) containing 1 -1.91451
MIR202 microRNA 202 -1.91451
VENTX VENT homeobox -1.91451
UTF1 undifferentiated embryonic cell transcription factor 1 -1.91451
LINC00896 long intergenic non-protein coding RNA 896 -1.90717
LOC284865 uncharacterized LOC284865 -1.90717
ZDHHC8 zinc finger, DHHC-type containing 8 -1.90701
LOC388849 uncharacterized LOC388849 -1.90701
RANBP1 RAN binding protein 1 -1.907
TRMT2A tRNA methyltransferase 2 homolog A (S. cerevisiae) -1.907
MIR3618 microRNA 3618 -1.90698
LRRC74B leucine rich repeat containing 74B -1.9065
AIFM3 apoptosis-inducing factor, mitochondrion-associated, 3 -1.90621
TXNRD2 thioredoxin reductase 2 -1.90535
VPREB1 pre-B lymphocyte 1 -1.89026
LINC00221 long intergenic non-protein coding RNA 221 -1.88771
DISC1 disrupted in schizophrenia 1 -1.8847
TSNAX-DISC1 TSNAX-DISC1 readthrough (NMD candidate) -1.88464
CFHR1 complement factor H-related 1 -1.88222
GGTLC2 gamma-glutamyltransferase light chain 2 -1.87496
POM121L1P POM121 transmembrane nucleoporin-like 1, pseudogene -1.87496
MAPK1 mitogen-activated protein kinase 1 -1.84948
MIR1306 microRNA 1306 -1.84606
THAP7-AS1 THAP7 antisense RNA 1 -1.8456
SLC25A1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 -1.82767
FRG2B FSHD region gene 2 family, member B -1.82668
HIRA histone cell cycle regulator -1.81267
GGT3P gamma-glutamyltransferase 3 pseudogene -1.81017
DTHD1 death domain containing 1 -1.80971
ASTN2 astrotactin 2 -1.80647
PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 -1.79688
DGCR8 DGCR8 microprocessor complex subunit -1.79359
THAP7 THAP domain containing 7 -1.79329
LZTR1 leucine-zipper-like transcription regulator 1 -1.7932
MIR650 microRNA 650 -1.77935
KDM6A lysine (K)-specific demethylase 6A -1.77525
PI4KA phosphatidylinositol 4-kinase, catalytic, alpha -1.75786
CDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) -1.75084
STK32C serine/threonine kinase 32C -1.74864
ARVCF armadillo repeat gene deleted in velocardiofacial syndrome -1.74688
TANGO2 transport and golgi organization 2 homolog (Drosophila) -1.74486
DGCR6 DiGeorge syndrome critical region gene 6 -1.74326
JAKMIP3 Janus kinase and microtubule interacting protein 3 -1.71857
DPH6-AS1 DPH6 antisense RNA 1 (head to head) -1.71557
FAF1 Fas (TNFRSF6) associated factor 1 -1.71137
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 -1.70674
LRRK1 leucine-rich repeat kinase 1 -1.70104
CLTCL1 clathrin, heavy chain-like 1 -1.69639
XKR3 XK, Kell blood group complex subunit-related family, member 3 -1.68471
ANKRD62P1-PARP4P3 ANKRD62P1-PARP4P3 readthrough, transcribed pseudogene -1.68389
MLPH melanophilin -1.68034
INPP5A inositol polyphosphate-5-phosphatase, 40kDa -1.67741
ADAM6 ADAM metallopeptidase domain 6 (pseudogene) -1.66661
C22ORF29 chromosome 22 open reading frame 29 -1.65026
GNB1L guanine nucleotide binding protein (G protein), beta polypeptide 1-like -1.65026
OR11H12 olfactory receptor, family 11, subfamily H, member 12 -1.64613
TCERG1L transcription elongation regulator 1-like -1.62794
CTNND2 catenin (cadherin-associated protein), delta 2 -1.62511
OR2T10 olfactory receptor, family 2, subfamily T, member 10 -1.62392
OR2T11 olfactory receptor, family 2, subfamily T, member 11 (gene/pseudogene) -1.62013
LOC642426 uncharacterized LOC642426 -1.61085
CFAP46 cilia and flagella associated protein 46 -1.60617
CCT8L2 chaperonin containing TCP1, subunit 8 (theta)-like 2 -1.60025
STK32B serine/threonine kinase 32B -1.59326
SSH3 slingshot protein phosphatase 3 -1.56641
ANKRD13D ankyrin repeat domain 13 family, member D -1.5653
ST6GAL1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 -1.56496
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme -1.55163
RAD9A RAD9 homolog A (S. pombe) -1.55163
TBC1D10C TBC1 domain family, member 10C -1.55153
CLCF1 cardiotrophin-like cytokine factor 1 -1.55139
C11ORF86 chromosome 11 open reading frame 86 -1.53945
PC pyruvate carboxylase -1.53921
ADRBK1 adrenergic, beta, receptor kinase 1 -1.53218
KDM2A lysine (K)-specific demethylase 2A -1.53218
KIAA0125 KIAA0125 -1.53014
POLD4 polymerase (DNA-directed), delta 4, accessory subunit -1.52314
RHOD ras homolog family member D -1.51333
IGLL5 immunoglobulin lambda-like polypeptide 5 -1.51163
TPTEP1 transmembrane phosphatase with tensin homology pseudogene 1 -1.50507
PEX14 peroxisomal biogenesis factor 14 -1.48895
SYT12 synaptotagmin XII -1.48682
DOCK1 dedicator of cytokinesis 1 -1.47658
BRIX1 BRX1, biogenesis of ribosomes -1.47562
DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21 -1.47562
DIAPH2 diaphanous-related formin 2 -1.47344
RAD1 RAD1 checkpoint DNA exonuclease -1.46951
PRLR prolactin receptor -1.46691
CAPSL calcyphosine-like -1.45215
IL7R interleukin 7 receptor -1.45209
RANBP3L RAN binding protein 3-like -1.45204
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase -1.45182
MIR580 microRNA 580 -1.45182
LMBRD2 LMBR1 domain containing 2 -1.45182
ZNF622 zinc finger protein 622 -1.45031
AGXT2 alanine--glyoxylate aminotransferase 2 -1.44748
LOC100130987 uncharacterized LOC100130987 -1.44648
TTC23L tetratricopeptide repeat domain 23-like -1.44618
LOC285696 uncharacterized LOC285696 -1.44069
SLC25A18 solute carrier family 25 (glutamate carrier), member 18 -1.43651
DNAJC13 DnaJ (Hsp40) homolog, subfamily C, member 13 -1.43609
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 -1.43413
NADK2 NAD kinase 2, mitochondrial -1.43041
RAD54L2 RAD54-like 2 (S. cerevisiae) -1.42869
TARS threonyl-tRNA synthetase -1.42816
AMACR alpha-methylacyl-CoA racemase -1.42747
RXFP3 relaxin/insulin-like family peptide receptor 3 -1.42741
C1QTNF3 C1q and tumor necrosis factor related protein 3 -1.42741
BASP1 brain abundant, membrane attached signal protein 1 -1.42699
MTMR12 myotubularin related protein 12 -1.42514
LOC646719 -1.42035
C5ORF22 chromosome 5 open reading frame 22 -1.41692
MIR4279 microRNA 4279 -1.4154
GOLPH3 golgi phosphoprotein 3 (coat-protein) -1.41422
LOC100130744 uncharacterized LOC100130744 -1.41367
FAM105A family with sequence similarity 105, member A -1.40985
UGT3A2 UDP glycosyltransferase 3 family, polypeptide A2 -1.40956
LOC340113 uncharacterized LOC340113 -1.40692
LOC401177 uncharacterized LOC401177 -1.40684
SUB1 SUB1 homolog (S. cerevisiae) -1.40662
MIR4637 microRNA 4637 -1.3937
ANKH ANKH inorganic pyrophosphate transport regulator -1.39364
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 -1.3922
NPR3 natriuretic peptide receptor 3 -1.38676
ZFR zinc finger RNA binding protein -1.38538
DROSHA drosha, ribonuclease type III -1.37783
OTULIN OTU deubiquitinase with linear linkage specificity -1.37454
SPEF2 sperm flagellar 2 -1.36962
SNHG18 small nucleolar RNA host gene 18 -1.34228
SNORD123 small nucleolar RNA, C/D box 123 -1.34228
TAS2R1 taste receptor, type 2, member 1 -1.34225
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1 -1.33969
C1QTNF3-AMACR C1QTNF3-AMACR readthrough (NMD candidate) -1.33643
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase -1.33169
FASTKD3 FAST kinase domains 3 -1.33169
MARCH6 membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase -1.32205
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) -1.32205
CMBL carboxymethylenebutenolidase homolog (Pseudomonas) -1.32172
UBE2QL1 ubiquitin-conjugating enzyme E2Q family-like 1 -1.32123
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -1.32117
MED10 mediator complex subunit 10 -1.32114