RT-112 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Bladder Carcinoma Tumour (Cell Model Passports, SIDM00402)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00402
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Genes

195 proteins associated with the cell line RT-112 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ACAA1 acetyl-CoA acyltransferase 1
ACSF2 acyl-CoA synthetase family member 2
ACTBL2 actin, beta-like 2
AHCYL1 adenosylhomocysteinase-like 1
ALAS1 5'-aminolevulinate synthase 1
ALDH1A3 aldehyde dehydrogenase 1 family, member A3
ANKH ANKH inorganic pyrophosphate transport regulator
ANXA8 annexin A8
AP1G2 adaptor-related protein complex 1, gamma 2 subunit
ARF6 ADP-ribosylation factor 6
ARPC1A actin related protein 2/3 complex, subunit 1A, 41kDa
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide
BCAT2 branched chain amino-acid transaminase 2, mitochondrial
BPGM 2,3-bisphosphoglycerate mutase
CAMK2G calcium/calmodulin-dependent protein kinase II gamma
CAPN1 calpain 1, (mu/I) large subunit
CAPNS2 calpain, small subunit 2
CAVIN2 caveolae associated protein 2
CDC50A cell division cycle 50 P4-ATPase accessory subunit A
CDK5RAP3 CDK5 regulatory subunit associated protein 3
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2
CHMP2B charged multivesicular body protein 2B
CHMP3 charged multivesicular body protein 3
CORO2A coronin, actin binding protein, 2A
CTNNA2 catenin (cadherin-associated protein), alpha 2
DDRGK1 DDRGK domain containing 1
DHRS7B dehydrogenase/reductase (SDR family) member 7B
DUSP9 dual specificity phosphatase 9
EPPK1 epiplakin 1
EVPL envoplakin
FAM174B family with sequence similarity 174, member B
FAM20B family with sequence similarity 20, member B
FMR1 fragile X mental retardation 1
GALNT1 polypeptide N-acetylgalactosaminyltransferase 1
GID8 GID complex subunit 8
GINS1 GINS complex subunit 1 (Psf1 homolog)
GLTP glycolipid transfer protein
HMGN1 high mobility group nucleosome binding domain 1
IGF1R insulin-like growth factor 1 receptor
ILVBL ilvB (bacterial acetolactate synthase)-like
IRS4 insulin receptor substrate 4
IVL involucrin
KRT13 keratin 13, type I
KRT4 keratin 4, type II
LIMCH1 LIM and calponin homology domains 1
LLGL1 lethal giant larvae homolog 1 (Drosophila)
LRPAP1 low density lipoprotein receptor-related protein associated protein 1
LRRC1 leucine rich repeat containing 1
LUM lumican
MCCC1 methylcrotonoyl-CoA carboxylase 1 (alpha)
MPRIP myosin phosphatase Rho interacting protein
MRPL48 mitochondrial ribosomal protein L48
MRPL54 mitochondrial ribosomal protein L54
MRPS33 mitochondrial ribosomal protein S33
MRPS34 mitochondrial ribosomal protein S34
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase
NELFB negative elongation factor complex member B
NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21
OCIAD1 OCIA domain containing 1
PARVB parvin, beta
PDK3 pyruvate dehydrogenase kinase, isozyme 3
PDXK pyridoxal (pyridoxine, vitamin B6) kinase
PHF14 PHD finger protein 14
PIGO phosphatidylinositol glycan anchor biosynthesis, class O
PIGS phosphatidylinositol glycan anchor biosynthesis, class S
PKMYT1 protein kinase, membrane associated tyrosine/threonine 1
PLXNA1 plexin A1
PPIG peptidylprolyl isomerase G (cyclophilin G)
PRADC1 protease-associated domain containing 1
PROM2 prominin 2
PTGES prostaglandin E synthase
RAB11B RAB11B, member RAS oncogene family
RAI1 retinoic acid induced 1
RALYL RALY RNA binding protein-like
RBM25 RNA binding motif protein 25
SCAF8 SR-related CTD-associated factor 8
SCG2 secretogranin II
SEC61B Sec61 beta subunit
SGPL1 sphingosine-1-phosphate lyase 1
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SLIT1 slit homolog 1 (Drosophila)
SMU1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
SNRPE small nuclear ribonucleoprotein polypeptide E
STAG1 stromal antigen 1
SYPL1 synaptophysin-like 1
TBC1D4 TBC1 domain family, member 4
THEM6 thioesterase superfamily member 6
TMEM11 transmembrane protein 11
TMPRSS4 transmembrane protease, serine 4
TOM1L2 target of myb1-like 2 (chicken)
TRAPPC6B trafficking protein particle complex 6B
TRIM16 tripartite motif containing 16
TSC2 tuberous sclerosis 2
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
UFL1 UFM1-specific ligase 1
WFS1 Wolfram syndrome 1 (wolframin)
XAB2 XPA binding protein 2
YIPF5 Yip1 domain family, member 5

Symbol Name
ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group)
ABCC6 ATP-binding cassette, sub-family C (CFTR/MRP), member 6
ANK2 ankyrin 2, neuronal
AP2S1 adaptor-related protein complex 2, sigma 1 subunit
APOL4 apolipoprotein L, 4
ARFIP2 ADP-ribosylation factor interacting protein 2
ATP2A3 ATPase, Ca++ transporting, ubiquitous
ATP6V0A2 ATPase, H+ transporting, lysosomal V0 subunit a2
BDH2 3-hydroxybutyrate dehydrogenase, type 2
BRI3BP BRI3 binding protein
BTF3L4 basic transcription factor 3-like 4
C12ORF29 chromosome 12 open reading frame 29
C1ORF131 chromosome 1 open reading frame 131
CDS2 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
CHD2 chromodomain helicase DNA binding protein 2
CKAP2 cytoskeleton associated protein 2
COL5A2 collagen, type V, alpha 2
COX11 COX11 cytochrome c oxidase copper chaperone
COX6C cytochrome c oxidase subunit VIc
CPQ carboxypeptidase Q
DCBLD2 discoidin, CUB and LCCL domain containing 2
DCK deoxycytidine kinase
DDAH2 dimethylarginine dimethylaminohydrolase 2
DDX19A DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A
ENO2 enolase 2 (gamma, neuronal)
FILIP1L filamin A interacting protein 1-like
FXR2 fragile X mental retardation, autosomal homolog 2
GALNS galactosamine (N-acetyl)-6-sulfatase
GHDC GH3 domain containing
GNG5 guanine nucleotide binding protein (G protein), gamma 5
HAUS7 HAUS augmin-like complex, subunit 7
HDAC7 histone deacetylase 7
HELZ helicase with zinc finger
HMG20B high mobility group 20B
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1
HPDL 4-hydroxyphenylpyruvate dioxygenase-like
HYPK huntingtin interacting protein K
IPO7 importin 7
IWS1 IWS1 homolog (S. cerevisiae)
KTI12 KTI12 homolog, chromatin associated (S. cerevisiae)
LOC442389 interferon induced transmembrane protein pseudogene
LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
MAGT1 magnesium transporter 1
MAN2C1 mannosidase, alpha, class 2C, member 1
MAP2K1 mitogen-activated protein kinase kinase 1
ME2 malic enzyme 2, NAD(+)-dependent, mitochondrial
MINK1 misshapen-like kinase 1
MIR3179-1 microRNA 3179-1
MNAT1 MNAT CDK-activating kinase assembly factor 1
MOCS1 molybdenum cofactor synthesis 1
MORC3 MORC family CW-type zinc finger 3
MPP6 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
MSN moesin
MSRB2 methionine sulfoxide reductase B2
MYO7A myosin VIIA
NDUFB11 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa
NEO1 neogenin 1
NOTCH2 notch 2
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1
PCYT1B phosphate cytidylyltransferase 1, choline, beta
PDE4DIP phosphodiesterase 4D interacting protein
PLRG1 pleiotropic regulator 1
POLR1D polymerase (RNA) I polypeptide D, 16kDa
POLR2I polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa
POLR2L polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa
POP7 processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)
PPP6R1 protein phosphatase 6, regulatory subunit 1
PRPS2 phosphoribosyl pyrophosphate synthetase 2
PSAT1 phosphoserine aminotransferase 1
PSPH phosphoserine phosphatase
PTMA prothymosin, alpha
RBM19 RNA binding motif protein 19
RBMX RNA binding motif protein, X-linked
RNF185 ring finger protein 185
RPL10 ribosomal protein L10
RPL19 ribosomal protein L19
RPL34 ribosomal protein L34
RPS15 ribosomal protein S15
RRP8 ribosomal RNA processing 8, methyltransferase, homolog (yeast)
RUFY3 RUN and FYVE domain containing 3
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2
SNRPA small nuclear ribonucleoprotein polypeptide A
TCEAL3 transcription elongation factor A (SII)-like 3
TCF25 transcription factor 25 (basic helix-loop-helix)
TECPR2 tectonin beta-propeller repeat containing 2
TIMM9 translocase of inner mitochondrial membrane 9 homolog (yeast)
TMEM230 transmembrane protein 230
TMEM41B transmembrane protein 41B
TP53BP2 tumor protein p53 binding protein 2
TSLIG1 tRNA splicing ligase complex subunit 1
TYMS thymidylate synthetase
UBE3A ubiquitin protein ligase E3A
UBL5 ubiquitin-like 5
ZNF292 zinc finger protein 292
ZNF593 zinc finger protein 593
ZNF787 zinc finger protein 787
ZRANB2 zinc finger, RAN-binding domain containing 2