Radotinib_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Radotinib perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Radotinib_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.220825
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.135566
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.131516
NAP1L1 nucleosome assembly protein 1-like 1 0.08996
ANXA1 annexin A1 0.0862753
LDHA lactate dehydrogenase A 0.0783067
TPI1 triosephosphate isomerase 1 0.0716374
ENO1 enolase 1, (alpha) 0.0657146
RPS3 ribosomal protein S3 0.0629192
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0539615
TPM3 tropomyosin 3 0.0536208
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0534541
ASPH aspartate beta-hydroxylase 0.0525497
EHBP1 EH domain binding protein 1 0.0520489
EEF2 eukaryotic translation elongation factor 2 0.0473618
HSPA8 heat shock 70kDa protein 8 0.0470563
AKAP12 A kinase (PRKA) anchor protein 12 0.0466332
RPS7 ribosomal protein S7 0.0462955
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.045143
BIRC3 baculoviral IAP repeat containing 3 0.0425224
POTEF POTE ankyrin domain family, member F 0.041786
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0408413
PRDX1 peroxiredoxin 1 0.0397783
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0393285
CCN2 cellular communication network factor 2 0.0388816
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0386882
RPL3 ribosomal protein L3 0.0385049
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 0.0376741
RPS4X ribosomal protein S4, X-linked 0.0374243
LOC112694756 uncharaterized LOC112694756 0.0367664
SON SON DNA binding protein 0.0362403
MARCHF4 membrane associated ring-CH-type finger 4 0.0360301
RPS12 ribosomal protein S12 0.0325036
EGR1 early growth response 1 0.0321484
RPS2 ribosomal protein S2 0.0315647
OSBPL8 oxysterol binding protein-like 8 0.0312138
PLK2 polo-like kinase 2 0.0300601
CSNK1A1 casein kinase 1, alpha 1 0.0296674
SET SET nuclear proto-oncogene 0.0296176
AKAP9 A kinase (PRKA) anchor protein 9 0.0294809
GJA1 gap junction protein, alpha 1, 43kDa 0.0294716
ZBTB20 zinc finger and BTB domain containing 20 0.028735
PCM1 pericentriolar material 1 0.0282192
ZNF407 zinc finger protein 407 0.0275413
KMT2C lysine (K)-specific methyltransferase 2C 0.0269284
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.02535
SFPQ splicing factor proline/glutamine-rich 0.0251218
SRRM2 serine/arginine repetitive matrix 2 0.0244081
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) 0.0243933
DTNA dystrobrevin, alpha 0.0241869
MKI67 marker of proliferation Ki-67 0.0236007
XRN1 5'-3' exoribonuclease 1 0.0233657
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.023274
TUBB4B tubulin, beta 4B class IVb 0.0231098
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0219423
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0217952
NSUN6 NOP2/Sun domain family, member 6 0.0216975
EDN1 endothelin 1 0.0216338
ZEB1 zinc finger E-box binding homeobox 1 0.0216008
PEG10 paternally expressed 10 0.0215811
BRD2 bromodomain containing 2 0.0213362
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0213201
PCBP2 poly(rC) binding protein 2 0.0211345
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0210835
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0210048
HMGA2 high mobility group AT-hook 2 0.0209732
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0208647
FKBP4 FK506 binding protein 4, 59kDa 0.020863
PGK1 phosphoglycerate kinase 1 0.0208528
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0205741
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.02055
BCLAF1 BCL2-associated transcription factor 1 0.0200881
PKM pyruvate kinase, muscle 0.0199304
MBNL1 muscleblind-like splicing regulator 1 0.019872
NRDC nardilysin convertase 0.019815
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.0193522
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.0192448
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.0192205
ZFYVE16 zinc finger, FYVE domain containing 16 0.0191595
ANKHD1 ankyrin repeat and KH domain containing 1 0.0190424
EGFR epidermal growth factor receptor 0.018613
AFF4 AF4/FMR2 family, member 4 0.0185944
EZR ezrin 0.018556
TUBA1C tubulin, alpha 1c 0.0184743
GABARAPL1 GABA(A) receptor-associated protein like 1 0.0183955
RPL9 ribosomal protein L9 0.018362
GPBP1 GC-rich promoter binding protein 1 0.0183301
SRSF11 serine/arginine-rich splicing factor 11 0.0181415
BAZ1B bromodomain adjacent to zinc finger domain, 1B 0.0180691
WDR26 WD repeat domain 26 0.0179871
COPA coatomer protein complex, subunit alpha 0.0178661
SMC4 structural maintenance of chromosomes 4 0.0178127
TYMS thymidylate synthetase 0.017778
CSMD1 CUB and Sushi multiple domains 1 0.0177397
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0176979
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0176627
RAB6A RAB6A, member RAS oncogene family 0.0173903
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0171677
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0171158
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial 0.017017

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.257201
TMSB10 thymosin beta 10 -0.123836
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.117999
NLGN1 neuroligin 1 -0.110577
MMP12 matrix metallopeptidase 12 -0.0926817
RPS6 ribosomal protein S6 -0.0844845
RPL35A ribosomal protein L35a -0.0832023
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0790573
RPLP1 ribosomal protein, large, P1 -0.0778268
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0776786
RPL38 ribosomal protein L38 -0.0666702
AREG amphiregulin -0.06637
RPL23 ribosomal protein L23 -0.064567
RPL8 ribosomal protein L8 -0.0626065
TENM3 teneurin transmembrane protein 3 -0.0621902
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0619858
AHNAK AHNAK nucleoprotein -0.0612117
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0607947
RPL34 ribosomal protein L34 -0.0598911
RPS8 ribosomal protein S8 -0.0576346
HSPB1 heat shock 27kDa protein 1 -0.0574375
RPS21 ribosomal protein S21 -0.0573185
RPLP2 ribosomal protein, large, P2 -0.0544762
VIM vimentin -0.0514601
GNAS GNAS complex locus -0.0495962
TAS2R14 taste receptor, type 2, member 14 -0.0493678
CXADR coxsackie virus and adenovirus receptor -0.0484847
RPS16 ribosomal protein S16 -0.0479916
RPS19 ribosomal protein S19 -0.0479528
DLC1 DLC1 Rho GTPase activating protein -0.046386
ATP5F1B ATP synthase F1 subunit beta -0.0445935
KPNB1 karyopherin (importin) beta 1 -0.0437225
KDM3A lysine (K)-specific demethylase 3A -0.0430909
CANX calnexin -0.0420592
RPS27A ribosomal protein S27a -0.0418314
RPS23 ribosomal protein S23 -0.041355
HMGB1 high mobility group box 1 -0.0404186
RPS27 ribosomal protein S27 -0.0399576
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0393932
PDE4D phosphodiesterase 4D, cAMP-specific -0.038573
PTMA prothymosin, alpha -0.0375378
H1-0 H1.0 linker histone -0.0368864
S100A6 S100 calcium binding protein A6 -0.0367874
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.03676
TPT1 tumor protein, translationally-controlled 1 -0.0364968
CALR calreticulin -0.0360966
RPS15 ribosomal protein S15 -0.0359301
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0352486
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0348958
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0347734
RPL36A ribosomal protein L36a -0.0347138
EIF4B eukaryotic translation initiation factor 4B -0.0347072
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.0344126
RTN3 reticulon 3 -0.0333742
BCHE butyrylcholinesterase -0.0323432
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0321922
RPLP0 ribosomal protein, large, P0 -0.0319694
TRMT112 tRNA methyltransferase 11-2 homolog (S. cerevisiae) -0.0318982
PDIA3 protein disulfide isomerase family A, member 3 -0.0318962
S100A10 S100 calcium binding protein A10 -0.0317772
RPS29 ribosomal protein S29 -0.0317093
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0316334
MYL12B myosin, light chain 12B, regulatory -0.0315434
RPS20 ribosomal protein S20 -0.0315208
RPS24 ribosomal protein S24 -0.0313097
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0312868
RPL19 ribosomal protein L19 -0.0309503
ZNF207 zinc finger protein 207 -0.0301309
IFIH1 interferon induced with helicase C domain 1 -0.0301157
EDARADD EDAR-associated death domain -0.0290943
ADGRG6 adhesion G protein-coupled receptor G6 -0.0289097
WWOX WW domain containing oxidoreductase -0.0286299
CPOX coproporphyrinogen oxidase -0.0281621
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0280158
RPL28 ribosomal protein L28 -0.0277169
PDIA6 protein disulfide isomerase family A, member 6 -0.0275972
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0275827
RPS5 ribosomal protein S5 -0.0269483
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0268878
RPL12 ribosomal protein L12 -0.0263937
VMP1 vacuole membrane protein 1 -0.026347
RBM39 RNA binding motif protein 39 -0.0262879
OGA O-GlcNAcase -0.0262095
PCNP PEST proteolytic signal containing nuclear protein -0.0259607
FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed -0.0257911
RPL32 ribosomal protein L32 -0.0257827
CUX1 cut-like homeobox 1 -0.0257759
CMIP c-Maf inducing protein -0.0251454
VCL vinculin -0.0249809
RAB10 RAB10, member RAS oncogene family -0.0247724
SETD5 SET domain containing 5 -0.0244251
FUS FUS RNA binding protein -0.0242958
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0242698
BIRC2 baculoviral IAP repeat containing 2 -0.0240656
THSD7A thrombospondin, type I, domain containing 7A -0.0240582
XPO1 exportin 1 -0.0239488
S100A9 S100 calcium binding protein A9 -0.0236501
CLDN1 claudin 1 -0.0234271
PRR11 proline rich 11 -0.0233948
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0232943