Radotinib_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Radotinib perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Radotinib_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ERRFI1 ERBB receptor feedback inhibitor 1 0.131417
PSD3 pleckstrin and Sec7 domain containing 3 0.12157
POTEF POTE ankyrin domain family, member F 0.0966791
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0944311
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0802765
ANGPTL4 angiopoietin-like 4 0.0651511
KMT2E lysine (K)-specific methyltransferase 2E 0.0629827
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0610903
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0596743
MACF1 microtubule-actin crosslinking factor 1 0.0548648
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.054535
CAPRIN2 caprin family member 2 0.0542023
TM4SF1 transmembrane 4 L six family member 1 0.0536741
FTH1 ferritin, heavy polypeptide 1 0.0534917
BIRC3 baculoviral IAP repeat containing 3 0.0521161
PDE10A phosphodiesterase 10A 0.0493829
MT2A metallothionein 2A 0.0492575
ZDHHC14 zinc finger, DHHC-type containing 14 0.0484498
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0470537
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0441477
LOC112694756 uncharaterized LOC112694756 0.0435258
PYGL phosphorylase, glycogen, liver 0.042143
ZFP36L1 ZFP36 ring finger protein-like 1 0.03801
JUN jun proto-oncogene 0.037664
TXNIP thioredoxin interacting protein 0.0365072
HLA-B major histocompatibility complex, class I, B 0.0364255
SDK1 sidekick cell adhesion molecule 1 0.0360874
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0351186
NPAS2 neuronal PAS domain protein 2 0.033134
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0329689
ESYT2 extended synaptotagmin-like protein 2 0.0320511
VMP1 vacuole membrane protein 1 0.0319661
NIBAN2 niban apoptosis regulator 2 0.0319459
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0318482
TP63 tumor protein p63 0.0310086
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0308819
NAV2 neuron navigator 2 0.0302717
PKM pyruvate kinase, muscle 0.029788
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.029274
VEGFA vascular endothelial growth factor A 0.0285218
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0281724
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0280532
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0279554
NHSL1 NHS-like 1 0.027707
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0275119
RPS6 ribosomal protein S6 0.0272066
ZMIZ1 zinc finger, MIZ-type containing 1 0.0270309
SLK STE20-like kinase 0.0268585
FOSL1 FOS-like antigen 1 0.0268477
OSBPL8 oxysterol binding protein-like 8 0.0265568
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0261923
CXCL8 chemokine (C-X-C motif) ligand 8 0.0261212
AMPD3 adenosine monophosphate deaminase 3 0.0257859
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0256626
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0256058
EZR ezrin 0.0254703
EGR1 early growth response 1 0.0249321
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain 0.0249155
JMJD1C jumonji domain containing 1C 0.0248336
CSMD3 CUB and Sushi multiple domains 3 0.0246351
HSPA8 heat shock 70kDa protein 8 0.0246154
MEF2A myocyte enhancer factor 2A 0.0245868
PCDH1 protocadherin 1 0.0244134
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0242416
NDRG1 N-myc downstream regulated 1 0.0240582
ARHGAP5 Rho GTPase activating protein 5 0.0239607
FMNL2 formin-like 2 0.0239248
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0233176
TSC22D1 TSC22 domain family, member 1 0.0233037
ENO1 enolase 1, (alpha) 0.0229654
B2M beta-2-microglobulin 0.0228003
DNER delta/notch-like EGF repeat containing 0.0220756
CCNL1 cyclin L1 0.0219638
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.021914
RUNX1 runt-related transcription factor 1 0.0219098
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0215309
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0215216
HOOK2 hook microtubule-tethering protein 2 0.0214907
TGM2 transglutaminase 2 0.0214873
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0214053
PRKCE protein kinase C, epsilon 0.0209038
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0207728
ADAM17 ADAM metallopeptidase domain 17 0.0207202
UPP1 uridine phosphorylase 1 0.0206419
EMP1 epithelial membrane protein 1 0.0205503
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0201785
RPLP2 ribosomal protein, large, P2 0.02012
ZMYND8 zinc finger, MYND-type containing 8 0.0201088
HLA-A major histocompatibility complex, class I, A 0.0200444
RPS3 ribosomal protein S3 0.0199556
SPAG9 sperm associated antigen 9 0.0197767
SIK3 SIK family kinase 3 0.0196664
RAB7A RAB7A, member RAS oncogene family 0.019397
RNMT RNA (guanine-7-) methyltransferase 0.019315
OFD1 oral-facial-digital syndrome 1 0.0190181
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 0.0190155
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0188806
PODXL podocalyxin-like 0.0187646
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0185354
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy 0.0183616

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.103375
AHNAK AHNAK nucleoprotein -0.0740669
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0634878
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0610711
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0546523
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0532856
TMSB4X thymosin beta 4, X-linked -0.0448895
CD44 CD44 molecule (Indian blood group) -0.0423378
TOP1 topoisomerase (DNA) I -0.0421524
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0420917
TMSB10 thymosin beta 10 -0.0419093
DLG1 discs, large homolog 1 (Drosophila) -0.0404524
ADGRG6 adhesion G protein-coupled receptor G6 -0.0376587
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0369558
CENPF centromere protein F, 350/400kDa -0.0355037
VCL vinculin -0.034977
TRIO trio Rho guanine nucleotide exchange factor -0.0344422
PTMA prothymosin, alpha -0.0329812
NCEH1 neutral cholesterol ester hydrolase 1 -0.0319954
ACTG1 actin gamma 1 -0.0318253
SMAD3 SMAD family member 3 -0.031696
ANXA2 annexin A2 -0.0312471
RASAL2 RAS protein activator like 2 -0.0297039
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0296532
PTPRF protein tyrosine phosphatase, receptor type, F -0.029371
CANX calnexin -0.0293155
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0285995
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0284158
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0264548
DOCK11 dedicator of cytokinesis 11 -0.025869
SMYD3 SET and MYND domain containing 3 -0.0256625
ARHGAP29 Rho GTPase activating protein 29 -0.0254898
EHBP1 EH domain binding protein 1 -0.0253768
DPYD dihydropyrimidine dehydrogenase -0.0253051
ANKRD50 ankyrin repeat domain 50 -0.0246904
OGA O-GlcNAcase -0.0245961
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0243937
STK17A serine/threonine kinase 17a -0.0237482
ANKRD12 ankyrin repeat domain 12 -0.0234915
VIM vimentin -0.0229779
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0228152
ECT2 epithelial cell transforming 2 -0.0226391
MAP3K14 mitogen-activated protein kinase kinase kinase 14 -0.0226311
EPHA4 EPH receptor A4 -0.0224949
HDLBP high density lipoprotein binding protein -0.0215487
MIB1 mindbomb E3 ubiquitin protein ligase 1 -0.0214569
BCAR3 breast cancer anti-estrogen resistance 3 -0.021353
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0213025
SMC4 structural maintenance of chromosomes 4 -0.0211799
PRELID2 PRELI domain containing 2 -0.0211746
CLIP2 CAP-GLY domain containing linker protein 2 -0.0207612
ANKRD28 ankyrin repeat domain 28 -0.0206398
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0201451
MB21D2 Mab-21 domain containing 2 -0.0197002
ZNF217 zinc finger protein 217 -0.0195391
RACK1 receptor for activated C kinase 1 -0.0195209
SLC38A2 solute carrier family 38, member 2 -0.019501
NCOR1 nuclear receptor corepressor 1 -0.0190891
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) -0.0190802
PUM2 pumilio RNA-binding family member 2 -0.0188134
MARCHF6 membrane associated ring-CH-type finger 6 -0.0187852
AHNAK2 AHNAK nucleoprotein 2 -0.0185543
MKI67 marker of proliferation Ki-67 -0.018549
PLK2 polo-like kinase 2 -0.0184094
MYSM1 Myb-like, SWIRM and MPN domains 1 -0.0182286
DIAPH3 diaphanous-related formin 3 -0.0182219
FNIP1 folliculin interacting protein 1 -0.0181517
MYH9 myosin, heavy chain 9, non-muscle -0.0181006
LPP LIM domain containing preferred translocation partner in lipoma -0.0179022
KDM4B lysine (K)-specific demethylase 4B -0.0174237
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.0173979
ANKRD33B ankyrin repeat domain 33B -0.0173237
PRRC2C proline-rich coiled-coil 2C -0.0171596
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0171314
PRMT2 protein arginine methyltransferase 2 -0.0169879
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0169796
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0168979
GOLGA4 golgin A4 -0.016816
HPCAL1 hippocalcin-like 1 -0.0167458
EFNA5 ephrin-A5 -0.0167362
RAD51B RAD51 paralog B -0.0167119
MBNL2 muscleblind-like splicing regulator 2 -0.0166029
CAPN2 calpain 2, (m/II) large subunit -0.0165693
ACBD6 acyl-CoA binding domain containing 6 -0.0165317
RPS24 ribosomal protein S24 -0.0165079
APOLD1 apolipoprotein L domain containing 1 -0.0164977
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0164325
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0162766
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0162526
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0161124
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.015883
KTN1 kinectin 1 (kinesin receptor) -0.0157315
STXBP5 syntaxin binding protein 5 (tomosyn) -0.0150779
UBE2E3 ubiquitin-conjugating enzyme E2E 3 -0.0150422
ANLN anillin, actin binding protein -0.0149324
COTL1 coactosin-like F-actin binding protein 1 -0.0149139
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0148502
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0147977
SENP5 SUMO1/sentrin specific peptidase 5 -0.0146681
RAB27B RAB27B, member RAS oncogene family -0.0146621