Radotinib_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Radotinib perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Radotinib_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0745927
EGR1 early growth response 1 0.0711106
FTH1 ferritin, heavy polypeptide 1 0.0669632
STC1 stanniocalcin 1 0.0656413
LOC112694756 uncharaterized LOC112694756 0.0614673
PKM pyruvate kinase, muscle 0.0565787
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0497827
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0457481
CEMIP cell migration inducing protein, hyaluronan binding 0.0440444
POTEF POTE ankyrin domain family, member F 0.0408745
CXCL8 chemokine (C-X-C motif) ligand 8 0.0384248
GRB10 growth factor receptor-bound protein 10 0.0375408
SAMD4A sterile alpha motif domain containing 4A 0.0354606
RPS4X ribosomal protein S4, X-linked 0.0317585
MCL1 myeloid cell leukemia 1 0.0309456
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0303265
EFNA5 ephrin-A5 0.0294918
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0275104
RPS3 ribosomal protein S3 0.024499
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0238386
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.023552
AREG amphiregulin 0.0225306
FRY furry homolog (Drosophila) 0.0223833
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0223673
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0216838
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0215781
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0212355
HSPA8 heat shock 70kDa protein 8 0.019603
EEF2 eukaryotic translation elongation factor 2 0.0188438
RPL3 ribosomal protein L3 0.0184995
TMEM45B transmembrane protein 45B 0.0179216
MSN moesin 0.0177869
BACE2 beta-site APP-cleaving enzyme 2 0.0176515
SOD2 superoxide dismutase 2, mitochondrial 0.017423
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0172893
SQOR sulfide quinone oxidoreductase 0.0169512
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0168577
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0166292
ENO1 enolase 1, (alpha) 0.0163953
RNF213 ring finger protein 213 0.0163506
ENO2 enolase 2 (gamma, neuronal) 0.0161192
VEGFA vascular endothelial growth factor A 0.0151619
HMGA1 high mobility group AT-hook 1 0.0150366
EP400 E1A binding protein p400 0.0146741
SAMD5 sterile alpha motif domain containing 5 0.0144406
C1D C1D nuclear receptor corepressor 0.0143324
BCL9L B-cell CLL/lymphoma 9-like 0.0143003
IFI44L interferon-induced protein 44-like 0.0142974
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) 0.0141305
PER2 period circadian clock 2 0.0140824
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.0138265
TTC3 tetratricopeptide repeat domain 3 0.0138048
CD47 CD47 molecule 0.0137162
DIAPH1 diaphanous-related formin 1 0.0136739
MT2A metallothionein 2A 0.0134175
CST3 cystatin C 0.0132324
HLA-A major histocompatibility complex, class I, A 0.013221
KMT2D lysine (K)-specific methyltransferase 2D 0.0131395
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0126575
ATP11A ATPase, class VI, type 11A 0.0126115
FBRS fibrosin 0.0124888
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0122435
ADAM28 ADAM metallopeptidase domain 28 0.0122408
ANTXR2 anthrax toxin receptor 2 0.0122229
SMAD3 SMAD family member 3 0.0122212
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0122004
ITGB4 integrin, beta 4 0.0120503
PAWR PRKC, apoptosis, WT1, regulator 0.0120461
KDM6B lysine (K)-specific demethylase 6B 0.011968
CD46 CD46 molecule, complement regulatory protein 0.0119629
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) 0.0119333
ZNF185 zinc finger protein 185 (LIM domain) 0.0118913
TPCN1 two pore segment channel 1 0.0118512
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 0.0117763
VIM vimentin 0.0117311
DHFR dihydrofolate reductase 0.0117166
GABARAPL1 GABA(A) receptor-associated protein like 1 0.0116725
EXT1 exostosin glycosyltransferase 1 0.0115387
BIRC3 baculoviral IAP repeat containing 3 0.0114206
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0113874
TXNIP thioredoxin interacting protein 0.0113479
AKAP9 A kinase (PRKA) anchor protein 9 0.0111884
ELK4 ELK4, ETS-domain protein (SRF accessory protein 1) 0.0111642
SLK STE20-like kinase 0.0111624
LRP5 low density lipoprotein receptor-related protein 5 0.0111545
IRAK2 interleukin-1 receptor-associated kinase 2 0.0111294
GSAP gamma-secretase activating protein 0.011018
SCFD2 sec1 family domain containing 2 0.0109851
NTSR1 neurotensin receptor 1 (high affinity) 0.0108883
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0107662
CAV2 caveolin 2 0.0106529
BCAR1 breast cancer anti-estrogen resistance 1 0.0106484
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0106438
FAM13A family with sequence similarity 13, member A 0.0106342
SACK1A scaffolding CK1 anchoring protein A 0.0105573
CES1 carboxylesterase 1 0.0104409
TPM3 tropomyosin 3 0.0103996
RNF149 ring finger protein 149 0.0102828
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.0102646
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0102395

decreased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 -0.226714
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.198398
CAV1 caveolin 1, caveolae protein, 22kDa -0.125942
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.124641
PDE4D phosphodiesterase 4D, cAMP-specific -0.111032
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.106919
ASPH aspartate beta-hydroxylase -0.104901
PTPRM protein tyrosine phosphatase, receptor type, M -0.0993917
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0986235
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0933683
MYOF myoferlin -0.0849402
SPAG9 sperm associated antigen 9 -0.0839106
AKR1C1 aldo-keto reductase family 1, member C1 -0.0742394
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0686494
AHNAK AHNAK nucleoprotein -0.068183
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.066757
PDLIM5 PDZ and LIM domain 5 -0.0661849
MKI67 marker of proliferation Ki-67 -0.0656772
THSD4 thrombospondin, type I, domain containing 4 -0.0654777
VCL vinculin -0.0650656
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0625132
TBC1D22A TBC1 domain family, member 22A -0.0624799
GSK3B glycogen synthase kinase 3 beta -0.0611557
OSMR oncostatin M receptor -0.0581069
PATJ PATJ crumbs cell polarity complex component -0.0579486
NABP1 nucleic acid binding protein 1 -0.0573185
RIMS2 regulating synaptic membrane exocytosis 2 -0.0571649
GCLC glutamate-cysteine ligase, catalytic subunit -0.0561501
H1-0 H1.0 linker histone -0.0552951
RBM39 RNA binding motif protein 39 -0.0540504
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0540234
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0527576
RAB1A RAB1A, member RAS oncogene family -0.0503147
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0499393
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0496429
TAS2R14 taste receptor, type 2, member 14 -0.0491358
UBC ubiquitin C -0.0482657
NAMPT nicotinamide phosphoribosyltransferase -0.0482141
TOP1 topoisomerase (DNA) I -0.0477354
PDIA3 protein disulfide isomerase family A, member 3 -0.0477011
ANXA2 annexin A2 -0.046963
USP34 ubiquitin specific peptidase 34 -0.0467131
ELL2 elongation factor, RNA polymerase II, 2 -0.0465004
JMJD1C jumonji domain containing 1C -0.0461027
CANX calnexin -0.0452506
TES testin LIM domain protein -0.0425993
PGK1 phosphoglycerate kinase 1 -0.0425691
CSNK1A1 casein kinase 1, alpha 1 -0.0425685
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0416431
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0414988
MAP7 microtubule-associated protein 7 -0.0410796
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0402619
LRP1B low density lipoprotein receptor-related protein 1B -0.0402619
FBXO11 F-box protein 11 -0.0395457
PM20D1 peptidase M20 domain containing 1 -0.0393714
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0389083
BRWD3 bromodomain and WD repeat domain containing 3 -0.0387584
PRRC2C proline-rich coiled-coil 2C -0.0382689
DSCAM Down syndrome cell adhesion molecule -0.0374955
BZW1 basic leucine zipper and W2 domains 1 -0.0366493
GPHN gephyrin -0.0360549
CUX1 cut-like homeobox 1 -0.0360217
NF1 neurofibromin 1 -0.0358994
ZC3H11A zinc finger CCCH-type containing 11A -0.0356226
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0351447
BBX bobby sox homolog (Drosophila) -0.0348315
GLS2 glutaminase 2 (liver, mitochondrial) -0.0331031
UGDH UDP-glucose 6-dehydrogenase -0.0329409
ACTG1 actin gamma 1 -0.0327671
BIRC6 baculoviral IAP repeat containing 6 -0.03231
IGFBP5 insulin-like growth factor binding protein 5 -0.0320235
KDM3A lysine (K)-specific demethylase 3A -0.0317421
USP53 ubiquitin specific peptidase 53 -0.0317092
PUM2 pumilio RNA-binding family member 2 -0.031551
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0314363
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0310528
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0308458
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0307249
RPS25 ribosomal protein S25 -0.0307103
FNDC3B fibronectin type III domain containing 3B -0.0302324
KDM2A lysine (K)-specific demethylase 2A -0.0302211
GPC6 glypican 6 -0.0300446
NBEAL1 neurobeachin-like 1 -0.0298933
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0297846
MYO1E myosin IE -0.0297319
HDLBP high density lipoprotein binding protein -0.0294439
ZMYM2 zinc finger, MYM-type 2 -0.0293229
TSC22D2 TSC22 domain family, member 2 -0.0292168
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0291707
GPAT3 glycerol-3-phosphate acyltransferase 3 -0.0291655
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0291488
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0291207
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0287615
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0285952
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0285694
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0285331
AP1S3 adaptor-related protein complex 1, sigma 3 subunit -0.028428
EIF1 eukaryotic translation initiation factor 1 -0.0283037
TMOD3 tropomodulin 3 (ubiquitous) -0.0282748
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0280676