Radotinib_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Radotinib perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Radotinib_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0471496
RAD51B RAD51 paralog B 0.0306463
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.027767
POTEF POTE ankyrin domain family, member F 0.0234802
PDLIM5 PDZ and LIM domain 5 0.0233769
MSN moesin 0.0233696
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.0224022
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0213392
PRKN parkin RBR E3 ubiquitin protein ligase 0.0203554
SMOC1 SPARC related modular calcium binding 1 0.019789
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0195048
MCL1 myeloid cell leukemia 1 0.0193027
LAMA5 laminin, alpha 5 0.0166971
PKM pyruvate kinase, muscle 0.016372
AKAP13 A kinase (PRKA) anchor protein 13 0.0157351
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0155494
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0154633
SRRM2 serine/arginine repetitive matrix 2 0.0144979
NCOR2 nuclear receptor corepressor 2 0.0136587
EXT1 exostosin glycosyltransferase 1 0.0127785
MAML3 mastermind-like 3 (Drosophila) 0.0125463
ENO2 enolase 2 (gamma, neuronal) 0.0124536
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.011811
AUTS2 autism susceptibility candidate 2 0.0117838
AKAP12 A kinase (PRKA) anchor protein 12 0.0116224
DOCK5 dedicator of cytokinesis 5 0.0112584
NALF1 NALCN channel auxiliary factor 1 0.0111836
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0111689
DST dystonin 0.0100849
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.00999929
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.00983921
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.00965095
NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1 0.00961745
FTH1 ferritin, heavy polypeptide 1 0.00943952
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0092627
RPS4X ribosomal protein S4, X-linked 0.00901319
NRXN3 neurexin 3 0.00879203
LSAMP limbic system-associated membrane protein 0.00835231
THSD4 thrombospondin, type I, domain containing 4 0.00834172
LINGO2 leucine rich repeat and Ig domain containing 2 0.00831316
ITPK1 inositol-tetrakisphosphate 1-kinase 0.00817554
ZNF638 zinc finger protein 638 0.00800962
VEGFA vascular endothelial growth factor A 0.00788004
WWOX WW domain containing oxidoreductase 0.00740024
EPC2 enhancer of polycomb homolog 2 (Drosophila) 0.00735235
SH2D2A SH2 domain containing 2A 0.00735019
ZFYVE16 zinc finger, FYVE domain containing 16 0.00733807
TUBA1B tubulin, alpha 1b 0.0072724
OBSCN obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF 0.00719379
FBXL7 F-box and leucine-rich repeat protein 7 0.00717765
ADGRG1 adhesion G protein-coupled receptor G1 0.00708633
CD109 CD109 molecule 0.00706512
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.00700751
HSPA8 heat shock 70kDa protein 8 0.00697811
MEF2A myocyte enhancer factor 2A 0.00690001
TRAPPC9 trafficking protein particle complex 9 0.00685532
EGFR epidermal growth factor receptor 0.00675865
C1D C1D nuclear receptor corepressor 0.00674217
DNER delta/notch-like EGF repeat containing 0.00673101
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.00669758
AADAC arylacetamide deacetylase 0.00661076
CHD1 chromodomain helicase DNA binding protein 1 0.00649189
SOX9 SRY (sex determining region Y)-box 9 0.00648726
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.00648662
RANBP17 RAN binding protein 17 0.0064737
SLC9A2 solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2 0.00642423
CYB5R3 cytochrome b5 reductase 3 0.00630132
BMP6 bone morphogenetic protein 6 0.00622579
ZBTB20 zinc finger and BTB domain containing 20 0.00618412
FNIP1 folliculin interacting protein 1 0.00617476
MYADM myeloid-associated differentiation marker 0.00617424
EIF5 eukaryotic translation initiation factor 5 0.00615457
ZMIZ1 zinc finger, MIZ-type containing 1 0.00614424
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.00611066
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 0.00607826
RBM3 RNA binding motif (RNP1, RRM) protein 3 0.0059628
N4BP2L2 NEDD4 binding protein 2-like 2 0.00594031
RPL21 ribosomal protein L21 0.005873
KDM6B lysine (K)-specific demethylase 6B 0.00586713
PCBP2 poly(rC) binding protein 2 0.0058606
RNF213 ring finger protein 213 0.00582017
FRY furry homolog (Drosophila) 0.00579145
ZFP36L1 ZFP36 ring finger protein-like 1 0.00577554
INTS6 integrator complex subunit 6 0.00577269
HDAC9 histone deacetylase 9 0.00572795
PTEN phosphatase and tensin homolog 0.0056463
ATXN1 ataxin 1 0.00563462
IGF2 insulin-like growth factor 2 0.00560956
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 0.00560697
SDCCAG8 serologically defined colon cancer antigen 8 0.00559183
RPL9 ribosomal protein L9 0.00559045
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.00554527
MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like 0.00552851
NRDC nardilysin convertase 0.00550927
LOC102724023 ES1 protein homolog, mitochondrial 0.00541073
SCAPER S-phase cyclin A-associated protein in the ER 0.00539302
CLMN calmin (calponin-like, transmembrane) 0.00538592
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.00532659
LGALS3 lectin, galactoside-binding, soluble, 3 0.00531552
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.00524838

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.191407
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.156807
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.12616
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.104395
FN1 fibronectin 1 -0.101708
NAMPT nicotinamide phosphoribosyltransferase -0.0858647
PTMA prothymosin, alpha -0.0754085
CANX calnexin -0.0639319
TM4SF1 transmembrane 4 L six family member 1 -0.0635388
PDE4D phosphodiesterase 4D, cAMP-specific -0.0614025
TFPI2 tissue factor pathway inhibitor 2 -0.0608814
ELL2 elongation factor, RNA polymerase II, 2 -0.0572395
TMSB10 thymosin beta 10 -0.0553339
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0509704
TRIO trio Rho guanine nucleotide exchange factor -0.0489704
RPLP1 ribosomal protein, large, P1 -0.047292
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0461969
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0452522
SPAG9 sperm associated antigen 9 -0.0450921
FTL ferritin, light polypeptide -0.0407448
NAP1L1 nucleosome assembly protein 1-like 1 -0.0384725
EFNA5 ephrin-A5 -0.0374848
TXNRD1 thioredoxin reductase 1 -0.0373245
OGA O-GlcNAcase -0.0366441
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0360819
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0360747
EIF1 eukaryotic translation initiation factor 1 -0.0358346
PGK1 phosphoglycerate kinase 1 -0.0347271
COL8A1 collagen, type VIII, alpha 1 -0.0337043
BZW1 basic leucine zipper and W2 domains 1 -0.0325404
RPL23 ribosomal protein L23 -0.0324966
RPL12 ribosomal protein L12 -0.0322025
RPS24 ribosomal protein S24 -0.0319067
RGS2 regulator of G-protein signaling 2 -0.0310406
LIMCH1 LIM and calponin homology domains 1 -0.0309494
TGFBI transforming growth factor, beta-induced, 68kDa -0.0309468
NCOA7 nuclear receptor coactivator 7 -0.0305016
MYOF myoferlin -0.0301543
RBM39 RNA binding motif protein 39 -0.0300731
RPL19 ribosomal protein L19 -0.029033
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0283737
NEK7 NIMA-related kinase 7 -0.0282141
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0280617
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0278467
KDM3A lysine (K)-specific demethylase 3A -0.0276211
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0274576
PRRC2C proline-rich coiled-coil 2C -0.0266426
SOD2 superoxide dismutase 2, mitochondrial -0.0265986
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0264809
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.026008
GOLGA4 golgin A4 -0.0252167
RTN4 reticulon 4 -0.0251332
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0250157
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0245459
AHNAK AHNAK nucleoprotein -0.024235
GNAS GNAS complex locus -0.0238678
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0238165
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0237067
RPL26 ribosomal protein L26 -0.0236931
TBXT T-box transcription factor T -0.0235447
BASP1 brain abundant, membrane attached signal protein 1 -0.0233261
GARS1 glycyl-tRNA synthetase 1 -0.0232818
PHF20 PHD finger protein 20 -0.0231338
LMAN1 lectin, mannose-binding, 1 -0.0224717
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0223481
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0222659
GDA guanine deaminase -0.0222554
RPL35 ribosomal protein L35 -0.0220426
IGF1R insulin-like growth factor 1 receptor -0.0219925
RAB1A RAB1A, member RAS oncogene family -0.021956
SRGN serglycin -0.0218493
RPS27A ribosomal protein S27a -0.0217453
LAMA1 laminin, alpha 1 -0.0217307
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0215769
WDR45B WD repeat domain 45B -0.0214479
TPT1 tumor protein, translationally-controlled 1 -0.0213512
NT5C2 5'-nucleotidase, cytosolic II -0.0211854
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0207997
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0207466
USP3 ubiquitin specific peptidase 3 -0.0205699
PBX1 pre-B-cell leukemia homeobox 1 -0.0205647
PDIA4 protein disulfide isomerase family A, member 4 -0.0204861
RPL31 ribosomal protein L31 -0.0204379
RPS19 ribosomal protein S19 -0.0204
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0203994
RPLP0 ribosomal protein, large, P0 -0.0203537
BIRC6 baculoviral IAP repeat containing 6 -0.0203388
RPL13A ribosomal protein L13a -0.0198809
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0198622
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0198381
S100A10 S100 calcium binding protein A10 -0.0197067
PDIA6 protein disulfide isomerase family A, member 6 -0.0195382
DGKD diacylglycerol kinase, delta 130kDa -0.0195165
FNDC3A fibronectin type III domain containing 3A -0.0195157
PDE10A phosphodiesterase 10A -0.0194245
RPS27 ribosomal protein S27 -0.0193318
SRPK2 SRSF protein kinase 2 -0.0192044
MARCHF6 membrane associated ring-CH-type finger 6 -0.0187722
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.018764
KYNU kynureninase -0.0187218