Radotinib_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Radotinib perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Radotinib_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
BIRC3 baculoviral IAP repeat containing 3 0.0437892
EGR1 early growth response 1 0.0325079
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0315334
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0312686
ZNF638 zinc finger protein 638 0.0293793
FNDC3B fibronectin type III domain containing 3B 0.0286995
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0274011
MSN moesin 0.0270109
AKAP12 A kinase (PRKA) anchor protein 12 0.0263744
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0232695
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0226957
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0224983
ANO6 anoctamin 6 0.0217562
DOCK5 dedicator of cytokinesis 5 0.0194956
GPC5 glypican 5 0.0188929
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0186189
ANXA1 annexin A1 0.0184738
HDAC9 histone deacetylase 9 0.0179587
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0178776
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0168787
PBX3 pre-B-cell leukemia homeobox 3 0.0168343
ZBTB10 zinc finger and BTB domain containing 10 0.0157719
SET SET nuclear proto-oncogene 0.0157503
CUL3 cullin 3 0.015731
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0156581
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0155949
SATB2 SATB homeobox 2 0.0154328
WWOX WW domain containing oxidoreductase 0.0148836
KDM4C lysine (K)-specific demethylase 4C 0.014573
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 0.0145238
PANX1 pannexin 1 0.0143663
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 0.0143184
TAF1 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa 0.0142078
FBXL4 F-box and leucine-rich repeat protein 4 0.0139873
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0137744
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0136065
EHBP1L1 EH domain binding protein 1-like 1 0.0135407
RUNX1 runt-related transcription factor 1 0.0134702
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0134282
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0132529
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0132345
LAMA5 laminin, alpha 5 0.0132295
RIGI RNA sensor RIG-I 0.0131309
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0131195
TBC1D15 TBC1 domain family, member 15 0.0126485
COMMD1 copper metabolism (Murr1) domain containing 1 0.0126211
CRYBG3 beta-gamma crystallin domain containing 3 0.0125771
ATG5 autophagy related 5 0.0125143
CLASP1 cytoplasmic linker associated protein 1 0.0124019
RCOR1 REST corepressor 1 0.0123815
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0123752
ANGPTL4 angiopoietin-like 4 0.012193
SIRT1 sirtuin 1 0.0120973
VEGFA vascular endothelial growth factor A 0.0120316
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0119957
NAV3 neuron navigator 3 0.0118701
FTH1 ferritin, heavy polypeptide 1 0.0118664
NEK7 NIMA-related kinase 7 0.011832
ATAD2 ATPase family, AAA domain containing 2 0.0117881
HSPA8 heat shock 70kDa protein 8 0.0117343
NKD1 naked cuticle homolog 1 (Drosophila) 0.0117065
BMAL2 basic helix-loop-helix ARNT like 2 0.011571
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0114335
SENP6 SUMO1/sentrin specific peptidase 6 0.0114301
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0113516
STK38L serine/threonine kinase 38 like 0.0112847
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0112782
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 0.0112778
DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2 0.011234
ANKRD36 ankyrin repeat domain 36 0.0112154
PPP4R4 protein phosphatase 4, regulatory subunit 4 0.0112031
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.011099
CLEC16A C-type lectin domain family 16, member A 0.0110706
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 0.0109802
DENND1A DENN/MADD domain containing 1A 0.0109659
ARL15 ADP-ribosylation factor-like 15 0.0109575
PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 0.0109492
EXT1 exostosin glycosyltransferase 1 0.010943
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0109411
EFL1 elongation factor like GTPase 1 0.0109246
LOXL2 lysyl oxidase-like 2 0.0108863
MRTFA myocardin related transcription factor A 0.0108553
ZDHHC17 zinc finger, DHHC-type containing 17 0.0108413
EP300 E1A binding protein p300 0.0107915
NDUFAF2 NADH dehydrogenase (ubiquinone) complex I, assembly factor 2 0.0107513
PRELID2 PRELI domain containing 2 0.0106894
IQCB1 IQ motif containing B1 0.0106299
FERMT2 fermitin family member 2 0.0106138
WDPCP WD repeat containing planar cell polarity effector 0.0105354
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0105181
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0104177
GIGYF2 GRB10 interacting GYF protein 2 0.010407
PPIL4 peptidylprolyl isomerase (cyclophilin)-like 4 0.0104064
PSEN1 presenilin 1 0.010394
DIAPH1 diaphanous-related formin 1 0.0103822
CHD7 chromodomain helicase DNA binding protein 7 0.0103635
PARP8 poly (ADP-ribose) polymerase family, member 8 0.0103591
GTDC1 glycosyltransferase-like domain containing 1 0.010356
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 0.0103556
PDLIM5 PDZ and LIM domain 5 0.0101519

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.458286
VIM vimentin -0.161398
PTMA prothymosin, alpha -0.107828
TMSB10 thymosin beta 10 -0.105144
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0682643
AHNAK AHNAK nucleoprotein -0.0612315
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0556673
IGFBP3 insulin-like growth factor binding protein 3 -0.051713
LDHA lactate dehydrogenase A -0.0498298
TPT1 tumor protein, translationally-controlled 1 -0.0463241
RPLP1 ribosomal protein, large, P1 -0.0460108
EIF1 eukaryotic translation initiation factor 1 -0.0445813
RPS8 ribosomal protein S8 -0.0420809
ANXA2 annexin A2 -0.0407623
TPM4 tropomyosin 4 -0.0398007
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0388596
BIRC6 baculoviral IAP repeat containing 6 -0.0382733
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0382359
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0370703
CANX calnexin -0.0370053
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0358696
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0353098
SLC38A2 solute carrier family 38, member 2 -0.03501
NF1 neurofibromin 1 -0.0347471
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0343069
RPL35A ribosomal protein L35a -0.0331827
ACTG1 actin gamma 1 -0.0323483
AKAP13 A kinase (PRKA) anchor protein 13 -0.0322489
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0312403
ANKRD28 ankyrin repeat domain 28 -0.0311446
HILPDA hypoxia inducible lipid droplet-associated -0.0311289
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0309078
GPC6 glypican 6 -0.0308887
RPS6 ribosomal protein S6 -0.0304594
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0302207
ZBTB38 zinc finger and BTB domain containing 38 -0.0301037
BASP1 brain abundant, membrane attached signal protein 1 -0.0300194
WAC WW domain containing adaptor with coiled-coil -0.0297401
AFF4 AF4/FMR2 family, member 4 -0.0291174
NKTR natural killer cell triggering receptor -0.0286732
S100A10 S100 calcium binding protein A10 -0.0286511
PICALM phosphatidylinositol binding clathrin assembly protein -0.028265
TM4SF1 transmembrane 4 L six family member 1 -0.0282335
RPL32 ribosomal protein L32 -0.0281195
TAOK1 TAO kinase 1 -0.0279442
SMC4 structural maintenance of chromosomes 4 -0.0279307
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.027821
RBM39 RNA binding motif protein 39 -0.0277216
RRBP1 ribosome binding protein 1 -0.0276261
RPLP0 ribosomal protein, large, P0 -0.0273297
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0272425
PGK1 phosphoglycerate kinase 1 -0.0271944
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0271574
GOLGA4 golgin A4 -0.0271151
SETD5 SET domain containing 5 -0.027045
ZMYND8 zinc finger, MYND-type containing 8 -0.0270006
MT2A metallothionein 2A -0.026374
RPL12 ribosomal protein L12 -0.0263479
MYOF myoferlin -0.0261179
SRPK2 SRSF protein kinase 2 -0.0261177
TMEM123 transmembrane protein 123 -0.0259897
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0256356
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0254667
ZFAND3 zinc finger, AN1-type domain 3 -0.0252851
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0247878
GNAS GNAS complex locus -0.0245744
RDX radixin -0.024448
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0244041
S100A9 S100 calcium binding protein A9 -0.0242602
DSTN destrin (actin depolymerizing factor) -0.023991
SDC4 syndecan 4 -0.0239632
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.023364
PHF20 PHD finger protein 20 -0.0233425
RPL19 ribosomal protein L19 -0.0233154
NAP1L1 nucleosome assembly protein 1-like 1 -0.0232151
WDR45B WD repeat domain 45B -0.0231171
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0228571
SEPTIN2 septin 2 -0.0228291
H3-3B H3.3 histone B -0.0228212
RPL23 ribosomal protein L23 -0.0227145
UBB ubiquitin B -0.0224825
FMN1 formin 1 -0.022378
TPI1 triosephosphate isomerase 1 -0.0222204
UBE2H ubiquitin-conjugating enzyme E2H -0.0220957
SPAG9 sperm associated antigen 9 -0.0220871
XPO1 exportin 1 -0.0218749
ERBIN erbb2 interacting protein -0.0218688
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0218601
ARHGAP5 Rho GTPase activating protein 5 -0.0214519
APP amyloid beta (A4) precursor protein -0.0214129
IFITM3 interferon induced transmembrane protein 3 -0.0212638
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0211188
RPLP2 ribosomal protein, large, P2 -0.0210493
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0210065
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0209824
VCL vinculin -0.0208856
YBX3 Y box binding protein 3 -0.0208426
PYGL phosphorylase, glycogen, liver -0.0205636
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0203076
RSF1 remodeling and spacing factor 1 -0.0201839