Ralimetinib dimesylate_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ralimetinib dimesylate perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ralimetinib dimesylate_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GRAMD1B GRAM domain containing 1B 0.0879534
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0727766
TXNRD1 thioredoxin reductase 1 0.0605226
VIM vimentin 0.059012
XPO1 exportin 1 0.0502459
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0498971
RPS3 ribosomal protein S3 0.0444814
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0424681
MARCHF4 membrane associated ring-CH-type finger 4 0.0414766
TPM3 tropomyosin 3 0.0413338
KTN1 kinectin 1 (kinesin receptor) 0.0411689
RPS12 ribosomal protein S12 0.0385963
MKI67 marker of proliferation Ki-67 0.038352
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0378389
RTN4 reticulon 4 0.0362632
SINHCAF SIN3-HDAC complex associated factor 0.0349066
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0341759
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.033593
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0335691
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0327371
NAP1L1 nucleosome assembly protein 1-like 1 0.032101
RPL37 ribosomal protein L37 0.0314356
MED13L mediator complex subunit 13-like 0.0308974
DST dystonin 0.0304028
SMC4 structural maintenance of chromosomes 4 0.0298643
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0295782
SET SET nuclear proto-oncogene 0.0292978
TMEM41B transmembrane protein 41B 0.0288999
SRSF11 serine/arginine-rich splicing factor 11 0.0284016
RPL37A ribosomal protein L37a 0.0282498
ZNF292 zinc finger protein 292 0.0275498
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0273834
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0271438
ANKRD36 ankyrin repeat domain 36 0.0267801
AKAP12 A kinase (PRKA) anchor protein 12 0.0265959
RPS17 ribosomal protein S17 0.026221
EXOC6B exocyst complex component 6B 0.0249774
EIF4B eukaryotic translation initiation factor 4B 0.02477
TMEM245 transmembrane protein 245 0.0244438
TFPI2 tissue factor pathway inhibitor 2 0.0242121
RUSC2 RUN and SH3 domain containing 2 0.0240274
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0239633
DOCK3 dedicator of cytokinesis 3 0.0239099
ENO1 enolase 1, (alpha) 0.0238996
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0237385
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0234674
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.022963
MELK maternal embryonic leucine zipper kinase 0.0227335
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0226184
DNAJC10 DnaJ (Hsp40) homolog, subfamily C, member 10 0.0224767
PNN pinin, desmosome associated protein 0.0223783
RPRD2 regulation of nuclear pre-mRNA domain containing 2 0.0221026
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0219984
PALS1 protein associated with LIN7 1, MAGUK p55 family member 0.0219809
CSDE1 cold shock domain containing E1, RNA-binding 0.0218331
MAP3K14 mitogen-activated protein kinase kinase kinase 14 0.0212125
HLTF helicase-like transcription factor 0.021193
IPO7 importin 7 0.0209876
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 0.0208554
PUM2 pumilio RNA-binding family member 2 0.0208493
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0207825
SFPQ splicing factor proline/glutamine-rich 0.0206339
RPS7 ribosomal protein S7 0.0205473
GMPS guanine monphosphate synthase 0.0204791
SMYD3 SET and MYND domain containing 3 0.0203049
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 0.0202477
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha 0.0197902
PTPN11 protein tyrosine phosphatase, non-receptor type 11 0.0195977
AVL9 AVL9 homolog (S. cerevisiase) 0.0195105
MYO6 myosin VI 0.0194235
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0194005
CFH complement factor H 0.0193188
OGA O-GlcNAcase 0.0191737
SRPK2 SRSF protein kinase 2 0.0190618
ZNF148 zinc finger protein 148 0.0189909
DGKD diacylglycerol kinase, delta 130kDa 0.018966
ITGA6 integrin, alpha 6 0.0189299
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0188605
TM7SF3 transmembrane 7 superfamily member 3 0.018841
TRIO trio Rho guanine nucleotide exchange factor 0.0187343
TBC1D5 TBC1 domain family, member 5 0.0187201
CIP2A cellular inhibitor of PP2A 0.0185879
RNF145 ring finger protein 145 0.018537
SPRED1 sprouty-related, EVH1 domain containing 1 0.0185088
PALS2 protein associated with LIN7 2, MAGUK p55 family member 0.0183514
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0183466
TOP2B topoisomerase (DNA) II beta 180kDa 0.0181303
KRT18 keratin 18, type I 0.0180456
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0180082
RB1CC1 RB1-inducible coiled-coil 1 0.0178077
RRM2 ribonucleotide reductase M2 0.0177603
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.017732
CAMKMT calmodulin-lysine N-methyltransferase 0.017581
CDK19 cyclin-dependent kinase 19 0.0175159
MATR3 matrin 3 0.0175036
PA2G4 proliferation-associated 2G4, 38kDa 0.0173295
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L 0.0172042
ANKRD12 ankyrin repeat domain 12 0.0171453
RNF169 ring finger protein 169 0.0171263
CAVIN1 caveolae associated protein 1 0.0171251

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.457195
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.135589
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.098124
MCL1 myeloid cell leukemia 1 -0.0949007
EGR1 early growth response 1 -0.0799296
ACTG1 actin gamma 1 -0.0716851
YBX3 Y box binding protein 3 -0.066589
OSMR oncostatin M receptor -0.0588144
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0579123
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0572571
THSD4 thrombospondin, type I, domain containing 4 -0.0549048
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0528892
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0509688
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0487273
TMSB10 thymosin beta 10 -0.046483
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0459408
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0458414
NABP1 nucleic acid binding protein 1 -0.0453973
POTEF POTE ankyrin domain family, member F -0.0444305
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0421561
ATXN1 ataxin 1 -0.0418859
TM4SF1 transmembrane 4 L six family member 1 -0.0416875
AFF3 AF4/FMR2 family, member 3 -0.0415128
PDE10A phosphodiesterase 10A -0.0407497
RAB7A RAB7A, member RAS oncogene family -0.0394261
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0391019
FNDC3B fibronectin type III domain containing 3B -0.0390621
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0387336
AEBP2 AE binding protein 2 -0.0374318
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0374099
PDE4D phosphodiesterase 4D, cAMP-specific -0.0373504
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0372753
FBXO11 F-box protein 11 -0.0371496
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0366821
UBC ubiquitin C -0.0364044
RYR3 ryanodine receptor 3 -0.0359818
PRH1 proline-rich protein HaeIII subfamily 1 -0.035619
INTS6 integrator complex subunit 6 -0.0352773
WNT2B wingless-type MMTV integration site family, member 2B -0.0347104
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0342621
PDLIM5 PDZ and LIM domain 5 -0.033975
CANX calnexin -0.0331213
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0327407
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0323383
H1-0 H1.0 linker histone -0.0317057
TPM2 tropomyosin 2 (beta) -0.031278
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0311043
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0310932
COPA coatomer protein complex, subunit alpha -0.0308469
RNF213 ring finger protein 213 -0.0305948
FMNL2 formin-like 2 -0.0303963
LARP4B La ribonucleoprotein domain family, member 4B -0.0301594
RSF1 remodeling and spacing factor 1 -0.0300348
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0300286
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0295193
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0294265
RPS21 ribosomal protein S21 -0.0293667
ATF6 activating transcription factor 6 -0.0288585
NF1 neurofibromin 1 -0.0283612
NCOA7 nuclear receptor coactivator 7 -0.0281442
USP34 ubiquitin specific peptidase 34 -0.0275929
PRELID2 PRELI domain containing 2 -0.0274603
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.0272214
PFN1 profilin 1 -0.0269828
ATG7 autophagy related 7 -0.026547
ADAR adenosine deaminase, RNA-specific -0.0262995
STYK1 serine/threonine/tyrosine kinase 1 -0.0262594
PATJ PATJ crumbs cell polarity complex component -0.025853
TRIP12 thyroid hormone receptor interactor 12 -0.0252252
ATP5F1B ATP synthase F1 subunit beta -0.0250439
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0248852
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0245147
BRD2 bromodomain containing 2 -0.0244414
PRKCE protein kinase C, epsilon -0.0242484
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.0242018
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0240549
SETX senataxin -0.0238328
CDK12 cyclin-dependent kinase 12 -0.023731
NDRG1 N-myc downstream regulated 1 -0.0236145
MBD5 methyl-CpG binding domain protein 5 -0.0229438
YBX1 Y box binding protein 1 -0.0229212
EPAS1 endothelial PAS domain protein 1 -0.0227926
PDIA4 protein disulfide isomerase family A, member 4 -0.0227539
CAPZB capping protein (actin filament) muscle Z-line, beta -0.0221452
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0219206
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0218733
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0214953
EHBP1 EH domain binding protein 1 -0.0214522
LMAN1 lectin, mannose-binding, 1 -0.0213419
CUX1 cut-like homeobox 1 -0.0211871
RBM39 RNA binding motif protein 39 -0.0211633
ELL2 elongation factor, RNA polymerase II, 2 -0.0209006
RAB1A RAB1A, member RAS oncogene family -0.0208783
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0208305
WASF2 WAS protein family, member 2 -0.0205205
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0203236
TLN1 talin 1 -0.0200162
RIMS2 regulating synaptic membrane exocytosis 2 -0.0199603
IFIH1 interferon induced with helicase C domain 1 -0.0199367
BASP1 brain abundant, membrane attached signal protein 1 -0.0197382