Ralimetinib dimesylate_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ralimetinib dimesylate perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ralimetinib dimesylate_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0726629
ZNF292 zinc finger protein 292 0.0681424
THBS1 thrombospondin 1 0.0659542
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0590397
KMT2E lysine (K)-specific methyltransferase 2E 0.0497712
FN1 fibronectin 1 0.0490341
SMYD3 SET and MYND domain containing 3 0.0473116
ZFAND3 zinc finger, AN1-type domain 3 0.0458171
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0453823
DST dystonin 0.0439238
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0426927
ADAM9 ADAM metallopeptidase domain 9 0.0410601
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0403884
ADGRV1 adhesion G protein-coupled receptor V1 0.039762
PDE4D phosphodiesterase 4D, cAMP-specific 0.0395104
PDGFC platelet derived growth factor C 0.0376828
NTM neurotrimin 0.0374313
UPP1 uridine phosphorylase 1 0.03695
PROS1 protein S (alpha) 0.0363059
CSDE1 cold shock domain containing E1, RNA-binding 0.0361336
NPAS3 neuronal PAS domain protein 3 0.036092
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0355606
SET SET nuclear proto-oncogene 0.0352773
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0333173
WDR43 WD repeat domain 43 0.0328675
RC3H1 ring finger and CCCH-type domains 1 0.032438
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 0.0323834
RAB2A RAB2A, member RAS oncogene family 0.0318821
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0317899
FUBP1 far upstream element (FUSE) binding protein 1 0.0317032
ADGRL2 adhesion G protein-coupled receptor L2 0.0315511
NAMPT nicotinamide phosphoribosyltransferase 0.031354
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0312369
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0294047
TCEA1 transcription elongation factor A (SII), 1 0.0293023
PDLIM5 PDZ and LIM domain 5 0.0288648
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0287207
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0280063
HDAC9 histone deacetylase 9 0.0274965
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0274139
SRRM2 serine/arginine repetitive matrix 2 0.0273202
PNISR PNN-interacting serine/arginine-rich protein 0.0269974
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0267145
NCKAP1 NCK-associated protein 1 0.026501
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0263396
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0260167
DNMBP dynamin binding protein 0.0258806
SCN9A sodium channel, voltage gated, type IX alpha subunit 0.0256654
TRPS1 trichorhinophalangeal syndrome I 0.0254072
PHF3 PHD finger protein 3 0.0254068
GPC6 glypican 6 0.0252774
CDC73 cell division cycle 73 0.0248725
SOX5 SRY (sex determining region Y)-box 5 0.0246649
CHD1 chromodomain helicase DNA binding protein 1 0.0246012
CALCR calcitonin receptor 0.0246
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0244647
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0244103
SGCE sarcoglycan, epsilon 0.0243395
SMG7 SMG7 nonsense mediated mRNA decay factor 0.0242762
PRPF4B pre-mRNA processing factor 4B 0.0242375
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0241823
TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 0.0241231
NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3 0.0238495
DDAH1 dimethylarginine dimethylaminohydrolase 1 0.0237749
HSPH1 heat shock 105kDa/110kDa protein 1 0.0236272
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0236095
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0234231
NARS1 asparaginyl-tRNA synthetase 1 0.0232885
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0230845
DMXL1 Dmx-like 1 0.022939
TOP1 topoisomerase (DNA) I 0.0226552
NF1 neurofibromin 1 0.0225238
SBF2 SET binding factor 2 0.022426
DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29 0.0222724
GPHN gephyrin 0.0217207
ZNF608 zinc finger protein 608 0.0217038
MED21 mediator complex subunit 21 0.0216465
PPP1R12B protein phosphatase 1, regulatory subunit 12B 0.021356
CEP170 centrosomal protein 170kDa 0.021212
RYK receptor-like tyrosine kinase 0.0210938
SUB1 SUB1 homolog (S. cerevisiae) 0.0209922
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0207887
CPNE8 copine VIII 0.0206263
IVNS1ABP influenza virus NS1A binding protein 0.0205294
AUTS2 autism susceptibility candidate 2 0.0205227
SCLT1 sodium channel and clathrin linker 1 0.0205125
DOCK5 dedicator of cytokinesis 5 0.020478
BABAM2 BRISC and BRCA1 A complex member 2 0.0203926
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0203666
AP1S2 adaptor-related protein complex 1, sigma 2 subunit 0.0203483
SYT1 synaptotagmin I 0.0202845
NUP153 nucleoporin 153kDa 0.0201019
AFDN afadin, adherens junction formation factor 0.0200476
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0198523
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.0198055
USP53 ubiquitin specific peptidase 53 0.0197724
CORO1C coronin, actin binding protein, 1C 0.0196344
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1 0.0195927
SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E 0.0194614
MB21D2 Mab-21 domain containing 2 0.0194341

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.171255
VIM vimentin -0.109679
CDH10 cadherin 10, type 2 (T2-cadherin) -0.101535
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0922759
POTEF POTE ankyrin domain family, member F -0.084481
ATP5F1B ATP synthase F1 subunit beta -0.0822606
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0811561
ACTG1 actin gamma 1 -0.0793435
COL11A1 collagen, type XI, alpha 1 -0.0775889
MDK midkine (neurite growth-promoting factor 2) -0.0775243
PFN1 profilin 1 -0.076993
RPL35A ribosomal protein L35a -0.0697852
RPS6 ribosomal protein S6 -0.0686461
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.0645303
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0628791
COL5A2 collagen, type V, alpha 2 -0.0617131
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0577718
YBX1 Y box binding protein 1 -0.0566341
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0520067
PHIP pleckstrin homology domain interacting protein -0.0516697
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0505361
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.050344
RPS19 ribosomal protein S19 -0.0497072
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0483005
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0482026
RPS8 ribosomal protein S8 -0.0474043
EIF1 eukaryotic translation initiation factor 1 -0.0468002
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0452559
RPLP1 ribosomal protein, large, P1 -0.044696
MYL12B myosin, light chain 12B, regulatory -0.043271
LDHA lactate dehydrogenase A -0.0428405
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0425863
H1-0 H1.0 linker histone -0.0424061
FBL fibrillarin -0.0423963
PEG10 paternally expressed 10 -0.0423528
TMSB10 thymosin beta 10 -0.0421747
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.041344
TUBA1B tubulin, alpha 1b -0.0411227
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0410645
SFRP4 secreted frizzled-related protein 4 -0.0407512
PDIA3 protein disulfide isomerase family A, member 3 -0.0403477
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0399518
NCOA2 nuclear receptor coactivator 2 -0.0395883
GNAS GNAS complex locus -0.0388138
NCOR2 nuclear receptor corepressor 2 -0.0386582
RPL19 ribosomal protein L19 -0.0384152
DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2 -0.0383037
RPLP0 ribosomal protein, large, P0 -0.0380966
DEK DEK proto-oncogene -0.0374768
APLP2 amyloid beta (A4) precursor-like protein 2 -0.037269
SRP54 signal recognition particle 54kDa -0.0369193
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0368009
GLG1 golgi glycoprotein 1 -0.0366711
TJP1 tight junction protein 1 -0.0365847
HSPB1 heat shock 27kDa protein 1 -0.0364674
B2M beta-2-microglobulin -0.0363537
RPS4X ribosomal protein S4, X-linked -0.0357442
NIPBL Nipped-B homolog (Drosophila) -0.0350307
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0350243
FBXO11 F-box protein 11 -0.0343304
EMP1 epithelial membrane protein 1 -0.0343221
YY1 YY1 transcription factor -0.0341832
DARS1 aspartyl-tRNA synthetase 1 -0.0339848
FTL ferritin, light polypeptide -0.0338533
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0335399
RPS14 ribosomal protein S14 -0.0333977
WASF2 WAS protein family, member 2 -0.0333745
PARD3B par-3 family cell polarity regulator beta -0.0328998
LOC112694756 uncharaterized LOC112694756 -0.0326641
KDM5B lysine (K)-specific demethylase 5B -0.0324662
COL3A1 collagen, type III, alpha 1 -0.0324116
H3-3B H3.3 histone B -0.0321766
CALR calreticulin -0.0316533
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0316465
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0314653
AHNAK AHNAK nucleoprotein -0.0312838
COL1A2 collagen, type I, alpha 2 -0.0312579
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0309069
TAOK1 TAO kinase 1 -0.0306989
SKIL SKI-like proto-oncogene -0.0306523
ANKRD33B ankyrin repeat domain 33B -0.0303884
R3HDM1 R3H domain containing 1 -0.0303736
FAM177A1 family with sequence similarity 177, member A1 -0.0302684
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0302189
PTMA prothymosin, alpha -0.029885
FGF13 fibroblast growth factor 13 -0.0294893
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0293676
TENM3 teneurin transmembrane protein 3 -0.0293509
ZFPM2 zinc finger protein, FOG family member 2 -0.0292694
GARS1 glycyl-tRNA synthetase 1 -0.0292011
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0290546
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0290231
SMC3 structural maintenance of chromosomes 3 -0.0289431
RPS13 ribosomal protein S13 -0.0288643
UBE2K ubiquitin-conjugating enzyme E2K -0.0288514
RPL23 ribosomal protein L23 -0.0287889
RPL7 ribosomal protein L7 -0.0286605
RHOA ras homolog family member A -0.0285393
PGAP1 post-GPI attachment to proteins 1 -0.0284151
GARRE1 granule associated Rac and RHOG effector 1 -0.0283823