Ralimetinib dimesylate_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ralimetinib dimesylate perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ralimetinib dimesylate_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.116543
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0915584
PRELID2 PRELI domain containing 2 0.0817081
FNDC3B fibronectin type III domain containing 3B 0.062467
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0509816
DST dystonin 0.0509574
SLC39A11 solute carrier family 39, member 11 0.0490636
MACROD2 MACRO domain containing 2 0.0474603
SMYD3 SET and MYND domain containing 3 0.0433939
LINGO2 leucine rich repeat and Ig domain containing 2 0.0389946
RAD51B RAD51 paralog B 0.0375084
WWOX WW domain containing oxidoreductase 0.0356891
NBAS neuroblastoma amplified sequence 0.0316389
FHIT fragile histidine triad 0.0304068
NAV2 neuron navigator 2 0.030014
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0286896
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0284606
CDH13 cadherin 13 0.0275351
PNISR PNN-interacting serine/arginine-rich protein 0.0273735
GPR137B G protein-coupled receptor 137B 0.0272733
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0271336
COA1 cytochrome c oxidase assembly factor 1 homolog (S. cerevisiae) 0.0269107
CNIH3 cornichon family AMPA receptor auxiliary protein 3 0.026812
LRMDA leucine rich melanocyte differentiation associated 0.0265605
YEATS2 YEATS domain containing 2 0.026089
FMN1 formin 1 0.0258706
RNF24 ring finger protein 24 0.0250753
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0250025
STAT1 signal transducer and activator of transcription 1, 91kDa 0.024358
VGLL4 vestigial-like family member 4 0.0241023
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0239856
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0236707
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0235436
SAMD4A sterile alpha motif domain containing 4A 0.0230476
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0226355
SMC4 structural maintenance of chromosomes 4 0.0225855
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0222705
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0221452
ASPH aspartate beta-hydroxylase 0.0221019
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 0.0220624
CNKSR3 CNKSR family member 3 0.021937
IGF1R insulin-like growth factor 1 receptor 0.0216976
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) 0.0214489
SPRED1 sprouty-related, EVH1 domain containing 1 0.021393
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0211103
MAP4 microtubule-associated protein 4 0.0210347
AGTPBP1 ATP/GTP binding protein 1 0.0209496
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.020839
CLEC2D C-type lectin domain family 2, member D 0.0199041
DPP6 dipeptidyl-peptidase 6 0.0198993
PDCD6IP programmed cell death 6 interacting protein 0.0198923
AKAP13 A kinase (PRKA) anchor protein 13 0.0191621
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0189991
EXT1 exostosin glycosyltransferase 1 0.0189315
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0188774
MTAP methylthioadenosine phosphorylase 0.0188701
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0188478
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.0185362
XPO1 exportin 1 0.0184354
PRRC2C proline-rich coiled-coil 2C 0.0183996
ALCAM activated leukocyte cell adhesion molecule 0.0183781
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0182474
PTPRM protein tyrosine phosphatase, receptor type, M 0.0182265
CAMTA1 calmodulin binding transcription activator 1 0.0181942
FOXP1 forkhead box P1 0.0180921
ANGPTL4 angiopoietin-like 4 0.0180533
ANKRD36 ankyrin repeat domain 36 0.0177452
ACBD6 acyl-CoA binding domain containing 6 0.0175562
FBXL4 F-box and leucine-rich repeat protein 4 0.0173939
MELTF melanotransferrin 0.0173104
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.017258
FLNA filamin A, alpha 0.0171906
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0170521
DOT1L DOT1-like histone H3K79 methyltransferase 0.0170356
PCLO piccolo presynaptic cytomatrix protein 0.0170295
IFI16 interferon, gamma-inducible protein 16 0.0168845
ITGB5 integrin, beta 5 0.0167447
PSD3 pleckstrin and Sec7 domain containing 3 0.016721
VCL vinculin 0.0165545
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0164923
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0163867
TRIO trio Rho guanine nucleotide exchange factor 0.0163439
TRIM9 tripartite motif containing 9 0.0163224
KPNB1 karyopherin (importin) beta 1 0.0162558
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0162379
SPIRE1 spire-type actin nucleation factor 1 0.016222
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0162035
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0160565
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0160412
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0160029
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0159755
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0159022
TENM3 teneurin transmembrane protein 3 0.0157988
CEP250 centrosomal protein 250kDa 0.0157737
TUSC3 tumor suppressor candidate 3 0.0155122
BBX bobby sox homolog (Drosophila) 0.0155102
DLG1 discs, large homolog 1 (Drosophila) 0.0154248
KDM4C lysine (K)-specific demethylase 4C 0.0151805
ATAD2 ATPase family, AAA domain containing 2 0.0150435
PRKCE protein kinase C, epsilon 0.014915

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.421767
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.324814
VIM vimentin -0.2056
CXCL8 chemokine (C-X-C motif) ligand 8 -0.100406
EIF1 eukaryotic translation initiation factor 1 -0.0822116
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0778569
FTL ferritin, light polypeptide -0.0775505
LOC112694756 uncharaterized LOC112694756 -0.0758178
VDAC1 voltage-dependent anion channel 1 -0.0672152
PGK1 phosphoglycerate kinase 1 -0.0612288
NDRG1 N-myc downstream regulated 1 -0.0571784
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0569796
IGFBP3 insulin-like growth factor binding protein 3 -0.0538124
ACTG1 actin gamma 1 -0.0533856
UBC ubiquitin C -0.0524202
POTEF POTE ankyrin domain family, member F -0.052336
PKM pyruvate kinase, muscle -0.0485282
PMEL premelanosome protein -0.0476611
LSAMP limbic system-associated membrane protein -0.0472017
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0460517
RAB7A RAB7A, member RAS oncogene family -0.044208
SQSTM1 sequestosome 1 -0.0431938
MT2A metallothionein 2A -0.0409064
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0400965
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0383282
IER3 immediate early response 3 -0.0366632
CANX calnexin -0.036535
RHOA ras homolog family member A -0.0363464
RPL35A ribosomal protein L35a -0.035872
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0351404
LDHA lactate dehydrogenase A -0.034337
TM4SF1 transmembrane 4 L six family member 1 -0.0341038
TMSB10 thymosin beta 10 -0.0339706
HMGA1 high mobility group AT-hook 1 -0.0339355
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0336907
FBXO11 F-box protein 11 -0.0336405
TPI1 triosephosphate isomerase 1 -0.0332044
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0328081
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.032725
KDM5B lysine (K)-specific demethylase 5B -0.0325513
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0323743
MT1X metallothionein 1X -0.0321298
SPAG9 sperm associated antigen 9 -0.0316569
AKAP12 A kinase (PRKA) anchor protein 12 -0.0312028
RPS6 ribosomal protein S6 -0.0304418
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) -0.0301361
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0300209
EMP1 epithelial membrane protein 1 -0.0297826
ENO2 enolase 2 (gamma, neuronal) -0.0296498
CSDE1 cold shock domain containing E1, RNA-binding -0.0293098
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0290721
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0279811
ZBTB38 zinc finger and BTB domain containing 38 -0.0278617
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0277874
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0262025
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0261631
SEC24A SEC24 family member A -0.0254333
BZW2 basic leucine zipper and W2 domains 2 -0.0251919
AFF4 AF4/FMR2 family, member 4 -0.0246492
EGR1 early growth response 1 -0.024484
SPDYA speedy/RINGO cell cycle regulator family member A -0.0243586
CADM1 cell adhesion molecule 1 -0.0243436
RPL8 ribosomal protein L8 -0.0243104
SREBF2 sterol regulatory element binding transcription factor 2 -0.0242634
HDLBP high density lipoprotein binding protein -0.0241119
WASF2 WAS protein family, member 2 -0.0240956
CD63 CD63 molecule -0.0233697
EEF2 eukaryotic translation elongation factor 2 -0.0232856
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.023244
MORF4L2 mortality factor 4 like 2 -0.0229977
NAMPT nicotinamide phosphoribosyltransferase -0.0229192
BHLHE40 basic helix-loop-helix family, member e40 -0.0228907
APOD apolipoprotein D -0.0228351
FRMD4A FERM domain containing 4A -0.0228345
RPL19 ribosomal protein L19 -0.0228308
EIF4A2 eukaryotic translation initiation factor 4A2 -0.022761
ARF1 ADP-ribosylation factor 1 -0.0223085
CTSD cathepsin D -0.0218941
RACK1 receptor for activated C kinase 1 -0.0217782
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0217339
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.021645
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0215949
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) -0.021436
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0213636
SOX6 SRY (sex determining region Y)-box 6 -0.0213149
RPS4X ribosomal protein S4, X-linked -0.0213095
HDAC8 histone deacetylase 8 -0.0211284
RPL32 ribosomal protein L32 -0.0209286
LGALS1 lectin, galactoside-binding, soluble, 1 -0.020927
LOC102724023 ES1 protein homolog, mitochondrial -0.0207827
SHISA5 shisa family member 5 -0.0206901
WDR45B WD repeat domain 45B -0.0206611
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0206038
BTG1 B-cell translocation gene 1, anti-proliferative -0.0203847
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 -0.0201981
COPA coatomer protein complex, subunit alpha -0.0201559
CD59 CD59 molecule, complement regulatory protein -0.0201504
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0200038
S100A10 S100 calcium binding protein A10 -0.0199677
GRIK5 glutamate receptor, ionotropic, kainate 5 -0.0199664