Ralimetinib dimesylate_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ralimetinib dimesylate perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ralimetinib dimesylate_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.105982
B2M beta-2-microglobulin 0.0966057
FMNL2 formin-like 2 0.0726137
SOD2 superoxide dismutase 2, mitochondrial 0.0707005
SDC4 syndecan 4 0.0705113
CD44 CD44 molecule (Indian blood group) 0.0687356
ANXA2 annexin A2 0.0620862
NAMPT nicotinamide phosphoribosyltransferase 0.0578385
CADM1 cell adhesion molecule 1 0.0554476
UGCG UDP-glucose ceramide glucosyltransferase 0.0539512
IGFBP7 insulin-like growth factor binding protein 7 0.0509116
PLAUR plasminogen activator, urokinase receptor 0.0497264
SPAG9 sperm associated antigen 9 0.045611
FNDC3B fibronectin type III domain containing 3B 0.0454935
RTN4 reticulon 4 0.0452717
HIP1 huntingtin interacting protein 1 0.0451678
KMT2E lysine (K)-specific methyltransferase 2E 0.0451377
ANKRD11 ankyrin repeat domain 11 0.0438717
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0436079
ZBTB20 zinc finger and BTB domain containing 20 0.0432997
NAV2 neuron navigator 2 0.0427161
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0415957
ZNF292 zinc finger protein 292 0.0406078
TMEM165 transmembrane protein 165 0.0402764
ABI1 abl-interactor 1 0.0394813
ECE1 endothelin converting enzyme 1 0.0375058
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0374994
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0360607
H3-3B H3.3 histone B 0.0358498
PTN pleiotrophin 0.035556
RLF rearranged L-myc fusion 0.0353348
RNF145 ring finger protein 145 0.0352612
PRRC2C proline-rich coiled-coil 2C 0.0351797
ARRDC3 arrestin domain containing 3 0.0347751
MARCHF7 membrane associated ring-CH-type finger 7 0.0347687
FAM13A family with sequence similarity 13, member A 0.0342164
S100A6 S100 calcium binding protein A6 0.0333228
CLEC1B C-type lectin domain family 1, member B 0.0333126
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0330408
PPP3CC protein phosphatase 3, catalytic subunit, gamma isozyme 0.0327979
RUNX1 runt-related transcription factor 1 0.032749
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.0323852
MATR3 matrin 3 0.0320106
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0314498
AVL9 AVL9 homolog (S. cerevisiase) 0.0312062
ANLN anillin, actin binding protein 0.0311707
KIF1B kinesin family member 1B 0.0311062
UPP1 uridine phosphorylase 1 0.0306348
GOLGA4 golgin A4 0.0303751
RPS12 ribosomal protein S12 0.0300529
FNDC3A fibronectin type III domain containing 3A 0.0297422
RNF24 ring finger protein 24 0.0292106
SYNJ2 synaptojanin 2 0.029093
ADNP activity-dependent neuroprotector homeobox 0.0288509
MAP3K13 mitogen-activated protein kinase kinase kinase 13 0.0288192
PCM1 pericentriolar material 1 0.0287646
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0282314
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0282055
LGALS1 lectin, galactoside-binding, soluble, 1 0.0281446
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0277157
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0275821
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0274125
WTAP Wilms tumor 1 associated protein 0.0273842
ACBD3 acyl-CoA binding domain containing 3 0.0272828
TRA2A transformer 2 alpha homolog (Drosophila) 0.0271092
EIF1 eukaryotic translation initiation factor 1 0.0270417
FTL ferritin, light polypeptide 0.0265603
TNRC6A trinucleotide repeat containing 6A 0.0262565
TNIP1 TNFAIP3 interacting protein 1 0.0262354
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0261385
ITM2B integral membrane protein 2B 0.0260711
AMPD3 adenosine monophosphate deaminase 3 0.0259569
RAB8B RAB8B, member RAS oncogene family 0.0258117
DENND5A DENN/MADD domain containing 5A 0.0255655
KDM5B lysine (K)-specific demethylase 5B 0.0252866
VCAM1 vascular cell adhesion molecule 1 0.0252745
TMEM39A transmembrane protein 39A 0.0252145
FLOT1 flotillin 1 0.024905
RINT1 RAD50 interactor 1 0.0248395
USP9Y ubiquitin specific peptidase 9, Y-linked 0.0248394
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0248228
CALCOCO2 calcium binding and coiled-coil domain 2 0.0246143
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0245411
VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae) 0.0245102
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0244914
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0244709
BIRC3 baculoviral IAP repeat containing 3 0.0241621
WASF2 WAS protein family, member 2 0.024116
CCNI cyclin I 0.0239764
ELL2 elongation factor, RNA polymerase II, 2 0.023727
HIBCH 3-hydroxyisobutyryl-CoA hydrolase 0.0237059
FNBP4 formin binding protein 4 0.0236783
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 0.0236245
HPCAL1 hippocalcin-like 1 0.0235602
USP33 ubiquitin specific peptidase 33 0.023515
CEP170 centrosomal protein 170kDa 0.0234232
TNPO3 transportin 3 0.0233587
UBE2H ubiquitin-conjugating enzyme E2H 0.0233564
RACK1 receptor for activated C kinase 1 0.0232727
FNBP1L formin binding protein 1-like 0.0229056

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.413635
COL6A3 collagen, type VI, alpha 3 -0.203028
TIMP3 TIMP metallopeptidase inhibitor 3 -0.157886
CDH13 cadherin 13 -0.117744
FN1 fibronectin 1 -0.117219
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.101051
TGFBI transforming growth factor, beta-induced, 68kDa -0.0957452
COL6A1 collagen, type VI, alpha 1 -0.0845329
VCL vinculin -0.0752606
IL6 interleukin 6 -0.0738668
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0737346
CXCL8 chemokine (C-X-C motif) ligand 8 -0.071917
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0693641
VEGFC vascular endothelial growth factor C -0.0642567
EGFR epidermal growth factor receptor -0.0639303
TRIO trio Rho guanine nucleotide exchange factor -0.0601616
COL5A1 collagen, type V, alpha 1 -0.060028
NAV1 neuron navigator 1 -0.0595213
BIRC6 baculoviral IAP repeat containing 6 -0.0522046
RASAL2 RAS protein activator like 2 -0.0515288
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0512495
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0512339
F3 coagulation factor III (thromboplastin, tissue factor) -0.0491815
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0487644
LOX lysyl oxidase -0.0486898
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0465826
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0452893
ACTG1 actin gamma 1 -0.0450608
EFNA5 ephrin-A5 -0.0446663
AKAP12 A kinase (PRKA) anchor protein 12 -0.0439297
RAI14 retinoic acid induced 14 -0.0433347
RRBP1 ribosome binding protein 1 -0.0428973
POTEF POTE ankyrin domain family, member F -0.0424457
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.042109
PSD3 pleckstrin and Sec7 domain containing 3 -0.0408854
COL7A1 collagen, type VII, alpha 1 -0.0402099
PRKCA protein kinase C, alpha -0.0397741
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0388687
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.037935
PDE4D phosphodiesterase 4D, cAMP-specific -0.0379185
SEC24D SEC24 family member D -0.0378803
STARD13 StAR-related lipid transfer (START) domain containing 13 -0.0375285
HDLBP high density lipoprotein binding protein -0.0369729
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0368983
GLIS3 GLIS family zinc finger 3 -0.0367636
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0364973
NABP1 nucleic acid binding protein 1 -0.0352789
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0342634
LOXL2 lysyl oxidase-like 2 -0.0331433
EXOC4 exocyst complex component 4 -0.0331276
VEGFA vascular endothelial growth factor A -0.0330609
HIPK2 homeodomain interacting protein kinase 2 -0.0328936
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0328158
COL1A1 collagen, type I, alpha 1 -0.0325844
PDIA4 protein disulfide isomerase family A, member 4 -0.032022
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0315099
DST dystonin -0.0313966
FNIP1 folliculin interacting protein 1 -0.0312994
NALF1 NALCN channel auxiliary factor 1 -0.0309867
ATXN1 ataxin 1 -0.0309215
ZFAND3 zinc finger, AN1-type domain 3 -0.0298734
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -0.0293339
NBAS neuroblastoma amplified sequence -0.0293143
GRIK5 glutamate receptor, ionotropic, kainate 5 -0.0293104
PDLIM5 PDZ and LIM domain 5 -0.0292605
INHBA inhibin, beta A -0.0290615
NECTIN3 nectin cell adhesion molecule 3 -0.0285451
SMYD3 SET and MYND domain containing 3 -0.0284931
COL6A2 collagen, type VI, alpha 2 -0.0283851
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0282781
COL5A2 collagen, type V, alpha 2 -0.0282338
ALK anaplastic lymphoma receptor tyrosine kinase -0.0281432
MAP1B microtubule-associated protein 1B -0.0277234
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0275354
ALG11 ALG11, alpha-1,2-mannosyltransferase -0.026863
COG6 component of oligomeric golgi complex 6 -0.026654
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.026156
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 -0.0258646
MYO9A myosin IXA -0.0256707
SEC24A SEC24 family member A -0.0256375
FBN1 fibrillin 1 -0.0254265
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.025184
INTS6 integrator complex subunit 6 -0.0247434
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0246776
EXT1 exostosin glycosyltransferase 1 -0.02467
ATM ATM serine/threonine kinase -0.0246361
HM13 histocompatibility (minor) 13 -0.0246275
TMED9 transmembrane emp24 protein transport domain containing 9 -0.0245459
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0243366
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0243337
IARS1 isoleucyl-tRNA synthetase 1 -0.0242832
LCOR ligand dependent nuclear receptor corepressor -0.0241862
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0241577
SETBP1 SET binding protein 1 -0.0241478
FUS FUS RNA binding protein -0.0240245
KYNU kynureninase -0.0240013
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8 -0.0237627
FLNA filamin A, alpha -0.0237403
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0234748
MYOF myoferlin -0.0234445