Ranolazine_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ranolazine perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ranolazine_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HELZ helicase with zinc finger 0.100093
FAM13A family with sequence similarity 13, member A 0.0826071
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0711922
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.0692585
LPIN1 lipin 1 0.0677145
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0559729
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0543433
TRIO trio Rho guanine nucleotide exchange factor 0.0529735
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0520922
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0460335
SOX9 SRY (sex determining region Y)-box 9 0.0444208
SETD5 SET domain containing 5 0.0428096
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0421623
SOS1 son of sevenless homolog 1 (Drosophila) 0.0406937
FNBP1 formin binding protein 1 0.038147
NIPBL Nipped-B homolog (Drosophila) 0.0376009
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0373151
CDC27 cell division cycle 27 0.0362973
PCBP2 poly(rC) binding protein 2 0.0346453
NRIP1 nuclear receptor interacting protein 1 0.0345974
MSI2 musashi RNA-binding protein 2 0.0345966
ZMYM2 zinc finger, MYM-type 2 0.0345101
MEF2A myocyte enhancer factor 2A 0.0341794
PTK2 protein tyrosine kinase 2 0.0338001
FNDC3B fibronectin type III domain containing 3B 0.0335761
ZNF292 zinc finger protein 292 0.0335571
SMG7 SMG7 nonsense mediated mRNA decay factor 0.0335113
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0330718
USP9X ubiquitin specific peptidase 9, X-linked 0.0327594
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.032536
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0324437
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0324204
ENAH enabled homolog (Drosophila) 0.0323153
RFX7 regulatory factor X, 7 0.031712
DDIT4 DNA-damage-inducible transcript 4 0.0301365
AKAP12 A kinase (PRKA) anchor protein 12 0.0298974
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.0298283
RPS6 ribosomal protein S6 0.0297399
NAMPT nicotinamide phosphoribosyltransferase 0.0293378
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.029272
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0291705
OGA O-GlcNAcase 0.0288588
DST dystonin 0.0286893
SRP54 signal recognition particle 54kDa 0.0284243
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0283824
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.027998
PICALM phosphatidylinositol binding clathrin assembly protein 0.0279536
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0278441
WAC WW domain containing adaptor with coiled-coil 0.0277549
LCORL ligand dependent nuclear receptor corepressor-like 0.0275692
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0275629
GNA13 guanine nucleotide binding protein (G protein), alpha 13 0.0273461
ECT2 epithelial cell transforming 2 0.0272337
HMGB2 high mobility group box 2 0.0272214
SEPTIN9 septin 9 0.0271014
AFDN afadin, adherens junction formation factor 0.0268237
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 0.0267151
TENT5A terminal nucleotidyltransferase 5A 0.0266441
INSIG2 insulin induced gene 2 0.0265505
SSBP2 single-stranded DNA binding protein 2 0.0264934
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0262712
GLG1 golgi glycoprotein 1 0.0260937
XRN1 5'-3' exoribonuclease 1 0.0260605
DIAPH3 diaphanous-related formin 3 0.026047
CASC3 cancer susceptibility candidate 3 0.0258925
PRRC2C proline-rich coiled-coil 2C 0.0255713
SPAG9 sperm associated antigen 9 0.0253833
TTC3 tetratricopeptide repeat domain 3 0.02524
USP9Y ubiquitin specific peptidase 9, Y-linked 0.0251022
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 0.0250566
CENPF centromere protein F, 350/400kDa 0.0248148
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.024713
AUH AU RNA binding protein/enoyl-CoA hydratase 0.024518
TET2 tet methylcytosine dioxygenase 2 0.0244864
YEATS2 YEATS domain containing 2 0.0243546
PCNX1 pecanex 1 0.0241976
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 0.0241811
RNF145 ring finger protein 145 0.024086
AHCTF1 AT hook containing transcription factor 1 0.024077
EIF1 eukaryotic translation initiation factor 1 0.0239552
GDF15 growth differentiation factor 15 0.0237337
PKM pyruvate kinase, muscle 0.023674
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0232508
ANKRD28 ankyrin repeat domain 28 0.0231701
TRIM24 tripartite motif containing 24 0.0231688
ITGA1 integrin, alpha 1 0.0229421
NEK7 NIMA-related kinase 7 0.0229075
KMT2C lysine (K)-specific methyltransferase 2C 0.0226409
ATL2 atlastin GTPase 2 0.0226372
NAA35 N(alpha)-acetyltransferase 35, NatC auxiliary subunit 0.0223994
TNRC6B trinucleotide repeat containing 6B 0.0223059
RAD21 RAD21 homolog (S. pombe) 0.0221888
MRPL3 mitochondrial ribosomal protein L3 0.0221612
LCOR ligand dependent nuclear receptor corepressor 0.0221184
GNAS GNAS complex locus 0.0219468
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0218859
MTSS2 MTSS I-BAR domain containing 2 0.0217839
SMAD3 SMAD family member 3 0.0217498
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.021691
CHD1 chromodomain helicase DNA binding protein 1 0.0215919

decreased expression

Symbol Name Standardized Value
VCL vinculin -0.122319
IGF2 insulin-like growth factor 2 -0.119753
FMN1 formin 1 -0.0674699
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0608567
BCAS3 breast carcinoma amplified sequence 3 -0.0605377
SYT1 synaptotagmin I -0.049019
RNF213 ring finger protein 213 -0.0454769
SLIT2 slit homolog 2 (Drosophila) -0.044182
PTPRK protein tyrosine phosphatase, receptor type, K -0.0437557
PTPRD protein tyrosine phosphatase, receptor type, D -0.0431641
LIMA1 LIM domain and actin binding 1 -0.042217
BPTF bromodomain PHD finger transcription factor -0.0411688
NRP1 neuropilin 1 -0.0411132
MAP1B microtubule-associated protein 1B -0.0399134
NALF1 NALCN channel auxiliary factor 1 -0.0398822
TMSB10 thymosin beta 10 -0.0395018
COL3A1 collagen, type III, alpha 1 -0.0394726
DNM3 dynamin 3 -0.0370802
LSAMP limbic system-associated membrane protein -0.0358662
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0356821
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0347974
CDK6 cyclin-dependent kinase 6 -0.0345853
EGR1 early growth response 1 -0.0344471
TPST1 tyrosylprotein sulfotransferase 1 -0.0343669
FAM107B family with sequence similarity 107, member B -0.0332855
COL1A1 collagen, type I, alpha 1 -0.0331172
TPT1 tumor protein, translationally-controlled 1 -0.0325936
NRG1 neuregulin 1 -0.0323062
ANKRD17 ankyrin repeat domain 17 -0.0320587
VMP1 vacuole membrane protein 1 -0.0317057
APPBP2 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 -0.0314453
CADM2 cell adhesion molecule 2 -0.0314315
ANGPT1 angiopoietin 1 -0.0311751
RPS24 ribosomal protein S24 -0.0307506
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.0304508
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.0296318
ACTG1 actin gamma 1 -0.0295924
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0294489
CRH corticotropin releasing hormone -0.0288636
SCG2 secretogranin II -0.0284556
HMBOX1 homeobox containing 1 -0.0277843
MYO1E myosin IE -0.0274105
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0265761
UNC5C unc-5 homolog C (C. elegans) -0.0265367
PDZRN3 PDZ domain containing ring finger 3 -0.0264379
CDK12 cyclin-dependent kinase 12 -0.026201
PDE10A phosphodiesterase 10A -0.0261561
TLE4 transducin-like enhancer of split 4 -0.0261131
PLPP1 phospholipid phosphatase 1 -0.0260963
NCAM2 neural cell adhesion molecule 2 -0.0260357
AFF3 AF4/FMR2 family, member 3 -0.0259499
IER3 immediate early response 3 -0.0256844
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0256405
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0256404
RPS2 ribosomal protein S2 -0.0256233
LPP LIM domain containing preferred translocation partner in lipoma -0.0253503
ITPRID2 ITPR interacting domain containing 2 -0.0253059
TPM4 tropomyosin 4 -0.0252865
MAPK10 mitogen-activated protein kinase 10 -0.0250766
STK38L serine/threonine kinase 38 like -0.0249936
ZFHX3 zinc finger homeobox 3 -0.0246496
PCNX4 pecanex 4 -0.0245747
TMEM108 transmembrane protein 108 -0.0245739
LOC102724023 ES1 protein homolog, mitochondrial -0.0245498
AKAP9 A kinase (PRKA) anchor protein 9 -0.0245223
TPM1 tropomyosin 1 (alpha) -0.0242521
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0240669
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0239196
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0237193
PLAT plasminogen activator, tissue -0.0235192
TRPS1 trichorhinophalangeal syndrome I -0.023272
SOX4 SRY (sex determining region Y)-box 4 -0.0229741
VGF VGF nerve growth factor inducible -0.0228729
MAP4 microtubule-associated protein 4 -0.0226885
GRIK5 glutamate receptor, ionotropic, kainate 5 -0.0226292
CHD4 chromodomain helicase DNA binding protein 4 -0.0222196
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0221968
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0221952
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.021839
DSTN destrin (actin depolymerizing factor) -0.0214646
KLHL13 kelch-like family member 13 -0.0213914
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0212394
EFNA5 ephrin-A5 -0.0211931
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 -0.0211095
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0210264
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0207645
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0206267
RIGI RNA sensor RIG-I -0.020444
SCAPER S-phase cyclin A-associated protein in the ER -0.0204274
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0202827
CPNE8 copine VIII -0.0202145
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0201183
ATRNL1 attractin-like 1 -0.0201103
ARHGAP24 Rho GTPase activating protein 24 -0.0200615
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0199328
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B -0.0199226
MALT1 MALT1 paracaspase -0.0198637
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0198481
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0198393
ZNF609 zinc finger protein 609 -0.019799