Ranolazine_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ranolazine perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ranolazine_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0982206
PTBP3 polypyrimidine tract binding protein 3 0.0869857
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0857549
RNF43 ring finger protein 43 0.0595904
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.057881
B2M beta-2-microglobulin 0.055919
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0519067
NRIP1 nuclear receptor interacting protein 1 0.0507146
TXNIP thioredoxin interacting protein 0.0492236
RHOBTB3 Rho-related BTB domain containing 3 0.0471215
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0451779
MYO1E myosin IE 0.0420175
RNF149 ring finger protein 149 0.0419302
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0416866
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0411388
DSCAM Down syndrome cell adhesion molecule 0.0398261
TMEM51 transmembrane protein 51 0.0386405
KMT2E lysine (K)-specific methyltransferase 2E 0.0372162
IL20RA interleukin 20 receptor, alpha 0.0365992
IFNGR1 interferon gamma receptor 1 0.0342402
ZDHHC20 zinc finger, DHHC-type containing 20 0.0320386
ZFP36L1 ZFP36 ring finger protein-like 1 0.0314205
TMPRSS4 transmembrane protease, serine 4 0.0300099
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0291355
RPS6 ribosomal protein S6 0.0288847
ZMYM2 zinc finger, MYM-type 2 0.0275506
EPS8 epidermal growth factor receptor pathway substrate 8 0.027087
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0270501
HLA-A major histocompatibility complex, class I, A 0.025979
MEIS2 Meis homeobox 2 0.0256936
ZMYND8 zinc finger, MYND-type containing 8 0.0255025
SREBF2 sterol regulatory element binding transcription factor 2 0.0254205
TC2N tandem C2 domains, nuclear 0.0248585
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 0.0247242
SPRED1 sprouty-related, EVH1 domain containing 1 0.0246531
EIF1 eukaryotic translation initiation factor 1 0.0245592
EFHD2 EF-hand domain family, member D2 0.0239155
MACC1 metastasis associated in colon cancer 1 0.0238342
ZNF395 zinc finger protein 395 0.023757
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0234966
PDZD8 PDZ domain containing 8 0.0234568
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0234421
PTEN phosphatase and tensin homolog 0.0232789
RASSF6 Ras association (RalGDS/AF-6) domain family member 6 0.0232472
NPEPPS aminopeptidase puromycin sensitive 0.0227746
STK24 serine/threonine kinase 24 0.0226532
UBAP1 ubiquitin associated protein 1 0.0225011
MKI67 marker of proliferation Ki-67 0.0224488
NAMPT nicotinamide phosphoribosyltransferase 0.0223457
KLHL24 kelch-like family member 24 0.022191
ZNF148 zinc finger protein 148 0.0218649
NDRG1 N-myc downstream regulated 1 0.021615
UBE2H ubiquitin-conjugating enzyme E2H 0.0211902
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.020982
TMEM62 transmembrane protein 62 0.0206513
FHL2 four and a half LIM domains 2 0.0206059
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 0.0204746
PHIP pleckstrin homology domain interacting protein 0.0204727
LIMA1 LIM domain and actin binding 1 0.0204208
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0204156
HELZ helicase with zinc finger 0.0200649
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0199645
ZNF638 zinc finger protein 638 0.019936
SPRED2 sprouty-related, EVH1 domain containing 2 0.0197542
KLF3 Kruppel-like factor 3 (basic) 0.0197529
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0197232
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0195801
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0195561
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0193826
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0193417
LNX1 ligand of numb-protein X 1, E3 ubiquitin protein ligase 0.0192333
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.01911
ABHD2 abhydrolase domain containing 2 0.0191017
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0187858
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0186859
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 0.0185835
DPP4 dipeptidyl-peptidase 4 0.0185829
ARGLU1 arginine and glutamate rich 1 0.0185293
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 0.0183816
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0182314
SBF2 SET binding factor 2 0.0180409
FOSL2 FOS-like antigen 2 0.0179982
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0179903
CKAP2 cytoskeleton associated protein 2 0.0178959
ARB2A ARB2 cotranscriptional regulator A 0.0178481
PGK1 phosphoglycerate kinase 1 0.0177642
YEATS2 YEATS domain containing 2 0.0177219
RTN4 reticulon 4 0.0176578
ARRDC3 arrestin domain containing 3 0.0175899
PRELID2 PRELI domain containing 2 0.0175657
ERRFI1 ERBB receptor feedback inhibitor 1 0.0174892
EXOC1 exocyst complex component 1 0.0174575
PRRC2C proline-rich coiled-coil 2C 0.01741
EHF ets homologous factor 0.0172249
ZBTB43 zinc finger and BTB domain containing 43 0.0172048
ANKRD12 ankyrin repeat domain 12 0.0172032
NEK7 NIMA-related kinase 7 0.0171968
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked 0.0169036
TMEM245 transmembrane protein 245 0.0166201
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 0.0165815

decreased expression

Symbol Name Standardized Value
GMDS GDP-mannose 4,6-dehydratase -0.198607
EPSTI1 epithelial stromal interaction 1 (breast) -0.178604
RNF213 ring finger protein 213 -0.15301
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.151475
STAT1 signal transducer and activator of transcription 1, 91kDa -0.146969
LYZ lysozyme -0.139199
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.122723
SP100 SP100 nuclear antigen -0.119245
RIGI RNA sensor RIG-I -0.115181
GCLC glutamate-cysteine ligase, catalytic subunit -0.112674
MX1 MX dynamin-like GTPase 1 -0.109954
NPSR1 neuropeptide S receptor 1 -0.105762
ARHGAP26 Rho GTPase activating protein 26 -0.0884759
ANXA2 annexin A2 -0.0836758
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0775114
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0770597
INTS6 integrator complex subunit 6 -0.076616
MX2 MX dynamin-like GTPase 2 -0.0746871
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0726255
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0723097
BTBD9 BTB (POZ) domain containing 9 -0.0719463
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0718745
STS steroid sulfatase (microsomal), isozyme S -0.0712981
TSHZ2 teashirt zinc finger homeobox 2 -0.068604
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0685251
SQSTM1 sequestosome 1 -0.0651661
LAMA4 laminin, alpha 4 -0.0616739
MAML2 mastermind-like 2 (Drosophila) -0.061383
RABGAP1L RAB GTPase activating protein 1-like -0.0612959
PTMA prothymosin, alpha -0.0608252
RAB7A RAB7A, member RAS oncogene family -0.0599835
ZSWIM6 zinc finger, SWIM-type containing 6 -0.059697
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0590867
XAF1 XIAP associated factor 1 -0.0586517
SPATA13 spermatogenesis associated 13 -0.057133
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0565219
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0562987
LMO7 LIM domain 7 -0.054365
ITGA6 integrin, alpha 6 -0.0537249
TRIO trio Rho guanine nucleotide exchange factor -0.0533597
PRKCA protein kinase C, alpha -0.0521811
C6ORF132 chromosome 6 open reading frame 132 -0.0520904
PLSCR2 phospholipid scramblase 2 -0.051366
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0508354
IGFBP3 insulin-like growth factor binding protein 3 -0.0503821
EXT1 exostosin glycosyltransferase 1 -0.0493611
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 -0.0481103
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.046715
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0462605
MBNL2 muscleblind-like splicing regulator 2 -0.0459795
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa -0.0449603
GOLGB1 golgin B1 -0.0449098
TPT1 tumor protein, translationally-controlled 1 -0.0439851
MECOM MDS1 and EVI1 complex locus -0.0439648
IGF1R insulin-like growth factor 1 receptor -0.043559
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.0434648
TM4SF19 transmembrane 4 L six family member 19 -0.0426328
PMP22 peripheral myelin protein 22 -0.0422929
EPHB2 EPH receptor B2 -0.0412014
EGR1 early growth response 1 -0.0407318
PERP PERP, TP53 apoptosis effector -0.0407252
LPP LIM domain containing preferred translocation partner in lipoma -0.0405619
ASPH aspartate beta-hydroxylase -0.0404688
MCU mitochondrial calcium uniporter -0.0403663
SSH2 slingshot protein phosphatase 2 -0.039537
TBC1D22A TBC1 domain family, member 22A -0.0393407
LDLRAD4 low density lipoprotein receptor class A domain containing 4 -0.0381531
CANX calnexin -0.0381026
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0375116
ADAR adenosine deaminase, RNA-specific -0.0371281
RRBP1 ribosome binding protein 1 -0.0370699
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0367933
VMP1 vacuole membrane protein 1 -0.0367123
ACTG1 actin gamma 1 -0.0355896
LAP3 leucine aminopeptidase 3 -0.0349579
ATP11A ATPase, class VI, type 11A -0.034869
MAP7 microtubule-associated protein 7 -0.0348668
PATJ PATJ crumbs cell polarity complex component -0.0347518
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0346749
EZR ezrin -0.0342219
TJP1 tight junction protein 1 -0.0340852
PHF3 PHD finger protein 3 -0.0338889
TNS4 tensin 4 -0.0338072
SAMD9 sterile alpha motif domain containing 9 -0.0331347
IRF1 interferon regulatory factor 1 -0.0330429
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0328789
MSI2 musashi RNA-binding protein 2 -0.0328576
APOL6 apolipoprotein L, 6 -0.032021
APP amyloid beta (A4) precursor protein -0.0315439
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0308365
FNDC3B fibronectin type III domain containing 3B -0.0305907
ANKRD10 ankyrin repeat domain 10 -0.0305456
FBXO39 F-box protein 39 -0.030281
CSTPP1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 -0.0301519
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0298967
IFIH1 interferon induced with helicase C domain 1 -0.0298281
SETX senataxin -0.0297949
SAMHD1 SAM domain and HD domain 1 -0.0297876
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0293663
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0286074