Ranolazine_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ranolazine perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ranolazine_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.195523
AKAP12 A kinase (PRKA) anchor protein 12 0.105518
SLC38A2 solute carrier family 38, member 2 0.0491034
DTNA dystrobrevin, alpha 0.0375822
DDIT4 DNA-damage-inducible transcript 4 0.0374365
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0353763
HMGA1 high mobility group AT-hook 1 0.0337174
EIF1 eukaryotic translation initiation factor 1 0.0319239
EPS8 epidermal growth factor receptor pathway substrate 8 0.0311085
FMNL2 formin-like 2 0.0307802
OLA1 Obg-like ATPase 1 0.0305528
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0305192
DLC1 DLC1 Rho GTPase activating protein 0.0291805
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 0.0291095
INSIG2 insulin induced gene 2 0.0281737
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.027988
PTBP3 polypyrimidine tract binding protein 3 0.026802
ATP13A3 ATPase type 13A3 0.0242534
PCGF5 polycomb group ring finger 5 0.0239064
ARHGAP21 Rho GTPase activating protein 21 0.0230335
OSBPL9 oxysterol binding protein-like 9 0.0228641
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0222332
RPS6 ribosomal protein S6 0.0220907
GNA13 guanine nucleotide binding protein (G protein), alpha 13 0.0218827
RPL11 ribosomal protein L11 0.0215761
PLIN2 perilipin 2 0.0215404
PDLIM5 PDZ and LIM domain 5 0.0209998
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0208818
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0207558
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0205931
PAWR PRKC, apoptosis, WT1, regulator 0.0203671
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.020303
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0198945
SRRM1 serine/arginine repetitive matrix 1 0.0198464
PTPRM protein tyrosine phosphatase, receptor type, M 0.0195298
ZEB1 zinc finger E-box binding homeobox 1 0.0191632
FOXJ3 forkhead box J3 0.0191254
ADAM9 ADAM metallopeptidase domain 9 0.0186293
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.018518
GMDS GDP-mannose 4,6-dehydratase 0.0182501
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0182451
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0182025
AFF1 AF4/FMR2 family, member 1 0.0179792
KMT2E lysine (K)-specific methyltransferase 2E 0.0178477
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.017578
RPL23 ribosomal protein L23 0.0175395
ZFAND3 zinc finger, AN1-type domain 3 0.017361
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0172027
APLP2 amyloid beta (A4) precursor-like protein 2 0.0170471
KIF1B kinesin family member 1B 0.0169541
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.016748
NAP1L1 nucleosome assembly protein 1-like 1 0.0162287
NGLY1 N-glycanase 1 0.0161405
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0161163
RNF145 ring finger protein 145 0.0159644
QKI QKI, KH domain containing, RNA binding 0.0158939
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0158505
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 0.0154272
ITCH itchy E3 ubiquitin protein ligase 0.0154057
LPP LIM domain containing preferred translocation partner in lipoma 0.0153925
RPL7 ribosomal protein L7 0.0153039
ITGAV integrin, alpha V 0.0152991
FOXO1 forkhead box O1 0.0152598
RPL37A ribosomal protein L37a 0.0151238
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0149142
SEC24B SEC24 family member B 0.0149078
STRN3 striatin, calmodulin binding protein 3 0.0148499
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.014814
RNASE3 ribonuclease, RNase A family, 3 0.0147794
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.0147307
BIRC3 baculoviral IAP repeat containing 3 0.0146635
FXR1 fragile X mental retardation, autosomal homolog 1 0.0146325
SETD5 SET domain containing 5 0.0146236
MBNL1 muscleblind-like splicing regulator 1 0.0144635
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0144059
BAIAP2L1 BAI1-associated protein 2-like 1 0.0143866
ARL5B ADP-ribosylation factor-like 5B 0.0143506
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0142188
ZNF451 zinc finger protein 451 0.014158
CHIC2 cysteine-rich hydrophobic domain 2 0.0141536
RPS27 ribosomal protein S27 0.0138774
PICALM phosphatidylinositol binding clathrin assembly protein 0.0138556
MTMR3 myotubularin related protein 3 0.0138537
MCU mitochondrial calcium uniporter 0.0138255
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0136992
KCMF1 potassium channel modulatory factor 1 0.0136441
RAB2A RAB2A, member RAS oncogene family 0.0136161
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0135563
ESYT2 extended synaptotagmin-like protein 2 0.0135514
WDR43 WD repeat domain 43 0.0134957
GARS1 glycyl-tRNA synthetase 1 0.0134574
MYO1B myosin IB 0.0134545
RREB1 ras responsive element binding protein 1 0.0134094
MYO6 myosin VI 0.0133435
NBAS neuroblastoma amplified sequence 0.0132339
RPL27 ribosomal protein L27 0.0131605
SMAD5 SMAD family member 5 0.0131446
MT2A metallothionein 2A 0.013022
CDC42 cell division cycle 42 0.0128384
CCNY cyclin Y 0.0128209

decreased expression

Symbol Name Standardized Value
APOB apolipoprotein B -0.311603
FN1 fibronectin 1 -0.238129
C3 complement component 3 -0.184452
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.16799
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.148309
GPC3 glypican 3 -0.125584
IGFBP1 insulin-like growth factor binding protein 1 -0.0925902
PEG3 paternally expressed 3 -0.0857871
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0853454
TIMP1 TIMP metallopeptidase inhibitor 1 -0.083991
LRMDA leucine rich melanocyte differentiation associated -0.0818614
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0749557
NKD1 naked cuticle homolog 1 (Drosophila) -0.0741546
ELL2 elongation factor, RNA polymerase II, 2 -0.0733422
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0725827
TM4SF1 transmembrane 4 L six family member 1 -0.0663041
A2M alpha-2-macroglobulin -0.0651197
EHBP1 EH domain binding protein 1 -0.0610106
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0598494
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0578712
MBNL3 muscleblind-like splicing regulator 3 -0.0545289
DSPP dentin sialophosphoprotein -0.0537688
ZMYND8 zinc finger, MYND-type containing 8 -0.0537604
RRBP1 ribosome binding protein 1 -0.0537584
TRIM26 tripartite motif containing 26 -0.0468884
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0465884
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -0.0445427
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0430878
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0429623
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0424914
EXT1 exostosin glycosyltransferase 1 -0.0416119
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0406006
ENO1 enolase 1, (alpha) -0.039366
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14 -0.039217
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0379052
SOX5 SRY (sex determining region Y)-box 5 -0.0371085
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -0.0371056
TPT1 tumor protein, translationally-controlled 1 -0.0369825
CFB complement factor B -0.0369017
ACTN4 actinin, alpha 4 -0.0367472
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0366537
DNAH17 dynein, axonemal, heavy chain 17 -0.0363587
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0362012
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0360895
FNDC3B fibronectin type III domain containing 3B -0.0359689
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0350182
GPC6 glypican 6 -0.0342808
STAT1 signal transducer and activator of transcription 1, 91kDa -0.033365
RNF213 ring finger protein 213 -0.0330097
EPAS1 endothelial PAS domain protein 1 -0.0320547
DSCAM Down syndrome cell adhesion molecule -0.0316621
CEMIP2 cell migration inducing hyaluronidase 2 -0.0315037
ZBTB20 zinc finger and BTB domain containing 20 -0.0306371
OSMR oncostatin M receptor -0.0304805
TF transferrin -0.0302237
LOC112694756 uncharaterized LOC112694756 -0.028915
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0288561
SVIL supervillin -0.0287597
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.02852
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.028383
IGF1R insulin-like growth factor 1 receptor -0.0283678
SAMD4A sterile alpha motif domain containing 4A -0.0280613
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0279794
ZSWIM5 zinc finger, SWIM-type containing 5 -0.0277492
KIAA1217 KIAA1217 -0.0277032
KRT8 keratin 8, type II -0.0271523
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0269786
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0264894
TBCK TBC1 domain containing kinase -0.0263877
NCOA7 nuclear receptor coactivator 7 -0.0261727
PRRC2C proline-rich coiled-coil 2C -0.0261441
DOCK4 dedicator of cytokinesis 4 -0.025959
EML4 echinoderm microtubule associated protein like 4 -0.0251242
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0247671
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0240792
LCN2 lipocalin 2 -0.0240341
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.0240161
TMEM181 transmembrane protein 181 -0.0239882
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0239008
ARID3A AT rich interactive domain 3A (BRIGHT-like) -0.0238634
FTL ferritin, light polypeptide -0.0237872
DOCK5 dedicator of cytokinesis 5 -0.0236171
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0234218
PPP1R9A protein phosphatase 1, regulatory subunit 9A -0.0233609
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.023282
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0232227
EGR1 early growth response 1 -0.0232116
ICAM1 intercellular adhesion molecule 1 -0.0231944
PTPRF protein tyrosine phosphatase, receptor type, F -0.0231747
MAML2 mastermind-like 2 (Drosophila) -0.0231241
PEG10 paternally expressed 10 -0.0230427
PRKCSH protein kinase C substrate 80K-H -0.0225195
SYN3 synapsin III -0.0223959
SORL1 sortilin-related receptor, L(DLR class) A repeats containing -0.0222328
IER3 immediate early response 3 -0.0220539
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0219611
DOK6 docking protein 6 -0.021831
HLF hepatic leukemia factor -0.0217739
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0217135
ARL5A ADP-ribosylation factor-like 5A -0.0216565