Ranolazine_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ranolazine perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ranolazine_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.200376
TFPI2 tissue factor pathway inhibitor 2 0.179455
GRAMD1B GRAM domain containing 1B 0.128178
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0868115
RTN4 reticulon 4 0.0822568
TRIO trio Rho guanine nucleotide exchange factor 0.0801515
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0784401
YBX3 Y box binding protein 3 0.0708921
KTN1 kinectin 1 (kinesin receptor) 0.0707106
NIPBL Nipped-B homolog (Drosophila) 0.0694917
ERRFI1 ERBB receptor feedback inhibitor 1 0.0561296
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0538776
SMC4 structural maintenance of chromosomes 4 0.0530714
PHIP pleckstrin homology domain interacting protein 0.0501371
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.050004
ELL2 elongation factor, RNA polymerase II, 2 0.0491967
MARCHF4 membrane associated ring-CH-type finger 4 0.0491419
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0486553
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 0.0481369
TPI1 triosephosphate isomerase 1 0.0461938
RB1CC1 RB1-inducible coiled-coil 1 0.045791
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0455052
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0453126
RNF145 ring finger protein 145 0.0449247
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.044894
OGA O-GlcNAcase 0.0444915
ANKRD12 ankyrin repeat domain 12 0.0444455
ANO6 anoctamin 6 0.0429301
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0421498
MKI67 marker of proliferation Ki-67 0.0404376
PUM2 pumilio RNA-binding family member 2 0.0401501
EIF1 eukaryotic translation initiation factor 1 0.0389
MIS18BP1 MIS18 binding protein 1 0.0387983
KCMF1 potassium channel modulatory factor 1 0.0375446
RUSC2 RUN and SH3 domain containing 2 0.03707
TAS2R14 taste receptor, type 2, member 14 0.0370482
ZFR zinc finger RNA binding protein 0.0368836
CTTNBP2NL CTTNBP2 N-terminal like 0.0366872
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0366668
PLCB4 phospholipase C, beta 4 0.0355642
CEP192 centrosomal protein 192kDa 0.0351539
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0350647
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0346082
TMEM165 transmembrane protein 165 0.0339412
FBXO11 F-box protein 11 0.0337324
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.033479
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0334779
SRPK1 SRSF protein kinase 1 0.0332989
GOLGA4 golgin A4 0.0332226
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0331322
SLC38A2 solute carrier family 38, member 2 0.0328095
MORF4L2 mortality factor 4 like 2 0.0319418
ZFAND3 zinc finger, AN1-type domain 3 0.0315672
NAP1L1 nucleosome assembly protein 1-like 1 0.0315494
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0315285
CCND2 cyclin D2 0.0311803
RRM2 ribonucleotide reductase M2 0.0310987
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0309703
BBX bobby sox homolog (Drosophila) 0.0307458
SET SET nuclear proto-oncogene 0.0307269
ZFC3H1 zinc finger, C3H1-type containing 0.0304307
PCBP2 poly(rC) binding protein 2 0.0301786
RAD51B RAD51 paralog B 0.030105
ADAM17 ADAM metallopeptidase domain 17 0.0300362
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0295483
ZNF292 zinc finger protein 292 0.0293595
RICTOR RPTOR independent companion of MTOR, complex 2 0.0292523
CSNK1A1 casein kinase 1, alpha 1 0.0292156
SGO2 shugoshin 2 0.0284379
RASAL2 RAS protein activator like 2 0.0283172
BRWD1 bromodomain and WD repeat domain containing 1 0.0281379
USP9X ubiquitin specific peptidase 9, X-linked 0.0281284
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 0.0279791
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0278814
HP1BP3 heterochromatin protein 1, binding protein 3 0.0278378
RASA2 RAS p21 protein activator 2 0.0276996
RPLP0 ribosomal protein, large, P0 0.0276985
TMEM41B transmembrane protein 41B 0.0276879
RBM25 RNA binding motif protein 25 0.0276149
XPO1 exportin 1 0.0275917
NFE2L2 nuclear factor, erythroid 2-like 2 0.0274131
JMJD1C jumonji domain containing 1C 0.0272471
ZBTB20 zinc finger and BTB domain containing 20 0.027228
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.0272216
ZMYM2 zinc finger, MYM-type 2 0.0270798
EXOC6B exocyst complex component 6B 0.0269357
SRPK2 SRSF protein kinase 2 0.0268801
PDS5A PDS5 cohesin associated factor A 0.0266907
BZW1 basic leucine zipper and W2 domains 1 0.026636
CMSS1 cms1 ribosomal small subunit homolog (yeast) 0.0264307
PFDN2 prefoldin subunit 2 0.0260195
IPO7 importin 7 0.0257727
CBX3 chromobox homolog 3 0.0257504
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0257168
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0256361
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0255209
NUP153 nucleoporin 153kDa 0.025314
IGF2BP1 insulin-like growth factor 2 mRNA binding protein 1 0.0251866
GATAD2B GATA zinc finger domain containing 2B 0.0251013
ADAM9 ADAM metallopeptidase domain 9 0.0250941

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.192363
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.117273
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0828873
PTMA prothymosin, alpha -0.0781829
EEF2 eukaryotic translation elongation factor 2 -0.0756863
MCL1 myeloid cell leukemia 1 -0.0703894
TMSB10 thymosin beta 10 -0.0698541
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0611296
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0569539
HLA-B major histocompatibility complex, class I, B -0.0429575
CUX1 cut-like homeobox 1 -0.0402427
EGR1 early growth response 1 -0.0398989
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0385832
IFI6 interferon, alpha-inducible protein 6 -0.0383167
TPM4 tropomyosin 4 -0.037578
AEBP2 AE binding protein 2 -0.0369341
INTS6 integrator complex subunit 6 -0.0362755
YBX1 Y box binding protein 1 -0.0361939
CALR calreticulin -0.0324329
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0323964
TPT1 tumor protein, translationally-controlled 1 -0.0322626
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0321109
ATXN1 ataxin 1 -0.0302788
NDRG1 N-myc downstream regulated 1 -0.0297275
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0297106
AFF3 AF4/FMR2 family, member 3 -0.0296731
NCOA7 nuclear receptor coactivator 7 -0.0289918
POTEF POTE ankyrin domain family, member F -0.0288939
RPS3 ribosomal protein S3 -0.0287796
PRH1 proline-rich protein HaeIII subfamily 1 -0.0281371
FNDC3B fibronectin type III domain containing 3B -0.0278605
RPL35A ribosomal protein L35a -0.027272
S100A10 S100 calcium binding protein A10 -0.0270655
LRRC23 leucine rich repeat containing 23 -0.0261399
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0259024
ACTG1 actin gamma 1 -0.0257352
RPS2 ribosomal protein S2 -0.0252415
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0252287
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0251201
VCL vinculin -0.0251012
TPM3 tropomyosin 3 -0.0248953
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0244246
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0240886
VIM vimentin -0.0239256
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0234489
WNT2B wingless-type MMTV integration site family, member 2B -0.0232106
FTL ferritin, light polypeptide -0.0229719
TAPBP TAP binding protein (tapasin) -0.0228337
MEF2D myocyte enhancer factor 2D -0.0224058
HMGA2 high mobility group AT-hook 2 -0.0222839
IER3 immediate early response 3 -0.0221256
BRD2 bromodomain containing 2 -0.0216476
RYR3 ryanodine receptor 3 -0.0212361
RPL37A ribosomal protein L37a -0.0205573
ARMH4 armadillo like helical domain containing 4 -0.0201729
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0199938
JUN jun proto-oncogene -0.0199733
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0199267
STX8 syntaxin 8 -0.0194142
RPS19 ribosomal protein S19 -0.019203
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit -0.0192
DIAPH2 diaphanous-related formin 2 -0.0189712
LOC102724023 ES1 protein homolog, mitochondrial -0.018823
NEK10 NIMA-related kinase 10 -0.0186551
HYOU1 hypoxia up-regulated 1 -0.0183905
RPS8 ribosomal protein S8 -0.0181229
MCTP1 multiple C2 domains, transmembrane 1 -0.0181094
FTH1 ferritin, heavy polypeptide 1 -0.0178338
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0176572
COPA coatomer protein complex, subunit alpha -0.0175169
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) -0.0172817
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0172619
NTSR1 neurotensin receptor 1 (high affinity) -0.0169478
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.016671
VCP valosin containing protein -0.0165924
TRIM59 tripartite motif containing 59 -0.0163814
BRD4 bromodomain containing 4 -0.0163591
RCC1 regulator of chromosome condensation 1 -0.0162863
RIMS2 regulating synaptic membrane exocytosis 2 -0.0161619
RPL8 ribosomal protein L8 -0.016077
SFTPA2 surfactant protein A2 -0.0160232
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0157542
FN1 fibronectin 1 -0.0157506
LOXL2 lysyl oxidase-like 2 -0.0157334
HDLBP high density lipoprotein binding protein -0.0157118
IFIH1 interferon induced with helicase C domain 1 -0.0156852
MACF1 microtubule-actin crosslinking factor 1 -0.0154727
AKAP9 A kinase (PRKA) anchor protein 9 -0.0154446
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0153966
RPLP1 ribosomal protein, large, P1 -0.0153476
VEGFA vascular endothelial growth factor A -0.0153381
MYOM1 myomesin 1 -0.0152177
CAVIN1 caveolae associated protein 1 -0.0150514
RPS27A ribosomal protein S27a -0.0150194
RPL31 ribosomal protein L31 -0.0149161
RPS10 ribosomal protein S10 -0.0148789
PDIA3 protein disulfide isomerase family A, member 3 -0.0142381
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.014179
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0141782
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 -0.0141111