Ranolazine_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ranolazine perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ranolazine_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase 0.101936
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.100127
GDA guanine deaminase 0.0886843
EFNA5 ephrin-A5 0.0746411
DST dystonin 0.0648351
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0625004
TRIO trio Rho guanine nucleotide exchange factor 0.0593532
CXCL8 chemokine (C-X-C motif) ligand 8 0.0527367
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0484533
DNER delta/notch-like EGF repeat containing 0.0425554
PM20D1 peptidase M20 domain containing 1 0.0424566
WDFY2 WD repeat and FYVE domain containing 2 0.0413018
NPAS2 neuronal PAS domain protein 2 0.038411
ESYT2 extended synaptotagmin-like protein 2 0.0380176
LIMCH1 LIM and calponin homology domains 1 0.0375047
ATP13A3 ATPase type 13A3 0.03607
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0358904
NRCAM neuronal cell adhesion molecule 0.0350212
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0347234
NAP1L1 nucleosome assembly protein 1-like 1 0.0344513
TXNRD1 thioredoxin reductase 1 0.0335407
EPB41L3 erythrocyte membrane protein band 4.1-like 3 0.0328763
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0324028
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0323535
AGFG1 ArfGAP with FG repeats 1 0.0317785
COL4A6 collagen, type IV, alpha 6 0.0312532
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0284257
FLNB filamin B, beta 0.0280549
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0277869
COL4A5 collagen, type IV, alpha 5 0.0259711
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0255918
GPAT3 glycerol-3-phosphate acyltransferase 3 0.02557
CTSC cathepsin C 0.0255169
BZW1 basic leucine zipper and W2 domains 1 0.0254886
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0248428
EPGN epithelial mitogen 0.0244391
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.02383
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0238116
ANKRD28 ankyrin repeat domain 28 0.0230963
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0228204
RNF145 ring finger protein 145 0.0227589
ARHGAP29 Rho GTPase activating protein 29 0.0227462
ZEB2 zinc finger E-box binding homeobox 2 0.0220891
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.021929
FNDC3B fibronectin type III domain containing 3B 0.0212864
TFPI2 tissue factor pathway inhibitor 2 0.0202938
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0197548
GRAMD1B GRAM domain containing 1B 0.0196994
RPLP0 ribosomal protein, large, P0 0.0193184
DIAPH3 diaphanous-related formin 3 0.0190335
TOP1 topoisomerase (DNA) I 0.0188907
NGLY1 N-glycanase 1 0.0186802
TNPO1 transportin 1 0.0185542
USP3 ubiquitin specific peptidase 3 0.0185159
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0183361
ZNF292 zinc finger protein 292 0.0181777
AVL9 AVL9 homolog (S. cerevisiase) 0.0181331
NRG1 neuregulin 1 0.0175467
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0170271
RTN4 reticulon 4 0.0170027
GOLGA4 golgin A4 0.0168635
THOC2 THO complex 2 0.0168616
GPC6 glypican 6 0.0166984
PRKD3 protein kinase D3 0.0166688
CSNK1A1 casein kinase 1, alpha 1 0.0165375
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0164493
ADAM9 ADAM metallopeptidase domain 9 0.0164109
MED13 mediator complex subunit 13 0.0163964
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0163301
AKAP12 A kinase (PRKA) anchor protein 12 0.0162693
EIF1 eukaryotic translation initiation factor 1 0.0159483
AP1S3 adaptor-related protein complex 1, sigma 3 subunit 0.0158762
CD44 CD44 molecule (Indian blood group) 0.0155456
MFF mitochondrial fission factor 0.0155035
PNISR PNN-interacting serine/arginine-rich protein 0.0153437
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) 0.0149235
ITGAV integrin, alpha V 0.0148886
WDR43 WD repeat domain 43 0.0148388
RPL4 ribosomal protein L4 0.0147469
ARHGAP12 Rho GTPase activating protein 12 0.0146672
HEATR1 HEAT repeat containing 1 0.0141312
ITCH itchy E3 ubiquitin protein ligase 0.0140842
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0140527
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0140306
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.013949
PGK1 phosphoglycerate kinase 1 0.0139094
PHF20 PHD finger protein 20 0.0138892
ZC3H12C zinc finger CCCH-type containing 12C 0.013851
RPS4X ribosomal protein S4, X-linked 0.0138117
ANKRD36 ankyrin repeat domain 36 0.0138029
ERBIN erbb2 interacting protein 0.0137975
PID1 phosphotyrosine interaction domain containing 1 0.0137659
PTEN phosphatase and tensin homolog 0.0137448
SRGN serglycin 0.0137067
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0135345
AKR1C1 aldo-keto reductase family 1, member C1 0.0134746
HIPK2 homeodomain interacting protein kinase 2 0.0134692
STC2 stanniocalcin 2 0.0134329
NBEAL1 neurobeachin-like 1 0.0134225
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.013399

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.248636
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.154646
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.144424
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.114742
PDE4D phosphodiesterase 4D, cAMP-specific -0.0943846
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0771739
PSD3 pleckstrin and Sec7 domain containing 3 -0.0763217
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0632956
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0602903
BASP1 brain abundant, membrane attached signal protein 1 -0.0584638
EGR1 early growth response 1 -0.05744
WARS1 tryptophanyl-tRNA synthetase 1 -0.0535951
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.052411
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0508917
NR4A2 nuclear receptor subfamily 4, group A, member 2 -0.0451094
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0441829
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0440984
OASL 2'-5'-oligoadenylate synthetase-like -0.0436209
DOCK4 dedicator of cytokinesis 4 -0.0414077
NR4A1 nuclear receptor subfamily 4, group A, member 1 -0.0413325
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.041186
FNDC3A fibronectin type III domain containing 3A -0.0404026
MAML3 mastermind-like 3 (Drosophila) -0.0398515
VCL vinculin -0.0395962
COL5A2 collagen, type V, alpha 2 -0.03952
NR4A3 nuclear receptor subfamily 4, group A, member 3 -0.037546
ASPH aspartate beta-hydroxylase -0.0365927
IL6 interleukin 6 -0.0361248
PTPRM protein tyrosine phosphatase, receptor type, M -0.0349423
SMAD2 SMAD family member 2 -0.0328061
CANX calnexin -0.0318044
VIM vimentin -0.0314522
RIGI RNA sensor RIG-I -0.0311112
IFIH1 interferon induced with helicase C domain 1 -0.0310481
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0304959
EZR ezrin -0.0297975
TMSB10 thymosin beta 10 -0.0297121
ADGRD1 adhesion G protein-coupled receptor D1 -0.0288138
MAP7 microtubule-associated protein 7 -0.0286627
ANTXR1 anthrax toxin receptor 1 -0.0283749
SMYD3 SET and MYND domain containing 3 -0.0283267
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0280176
LSAMP limbic system-associated membrane protein -0.027147
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0265464
YBX3 Y box binding protein 3 -0.0264234
NDRG1 N-myc downstream regulated 1 -0.0263354
LAMA1 laminin, alpha 1 -0.0261644
TPT1 tumor protein, translationally-controlled 1 -0.0260597
NCOR2 nuclear receptor corepressor 2 -0.0258698
RPH3AL rabphilin 3A-like (without C2 domains) -0.0257324
P3H2 prolyl 3-hydroxylase 2 -0.0255665
PALLD palladin, cytoskeletal associated protein -0.025366
ENO1 enolase 1, (alpha) -0.0249672
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0247399
SOX4 SRY (sex determining region Y)-box 4 -0.0246791
TPM4 tropomyosin 4 -0.0245159
NCOA7 nuclear receptor coactivator 7 -0.0243566
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0241285
DGKD diacylglycerol kinase, delta 130kDa -0.0240603
FOXK1 forkhead box K1 -0.0240202
EXT1 exostosin glycosyltransferase 1 -0.0234889
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0233626
IGFBP3 insulin-like growth factor binding protein 3 -0.0233183
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0228962
ESM1 endothelial cell-specific molecule 1 -0.0228054
AGTPBP1 ATP/GTP binding protein 1 -0.022789
CTNND2 catenin (cadherin-associated protein), delta 2 -0.0226244
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 -0.0225374
TMX4 thioredoxin-related transmembrane protein 4 -0.022396
BCAS3 breast carcinoma amplified sequence 3 -0.0221698
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0220312
SMOC1 SPARC related modular calcium binding 1 -0.0219338
CALR calreticulin -0.0219045
KIAA0825 KIAA0825 -0.021902
LOC102724023 ES1 protein homolog, mitochondrial -0.0218866
PDLIM5 PDZ and LIM domain 5 -0.0214179
PTMA prothymosin, alpha -0.0213531
JUN jun proto-oncogene -0.0213138
TTC28 tetratricopeptide repeat domain 28 -0.0212361
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0209645
EPHA4 EPH receptor A4 -0.020905
TBXT T-box transcription factor T -0.0208147
PRKN parkin RBR E3 ubiquitin protein ligase -0.0207368
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0204879
NT5C2 5'-nucleotidase, cytosolic II -0.0202614
ELL2 elongation factor, RNA polymerase II, 2 -0.0201856
OXSR1 oxidative stress responsive 1 -0.0194807
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0192225
PDIA4 protein disulfide isomerase family A, member 4 -0.0192081
SCN3A sodium channel, voltage gated, type III alpha subunit -0.0189678
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0187069
INHBA inhibin, beta A -0.0184866
PDE7B phosphodiesterase 7B -0.0184211
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0183769
CREM cAMP responsive element modulator -0.0179615
LAMA5 laminin, alpha 5 -0.0179075
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0176526
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0173924
CADM2 cell adhesion molecule 2 -0.0173647
S100A10 S100 calcium binding protein A10 -0.0172935