Ranolazine_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ranolazine perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ranolazine_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase 0.182187
PDE10A phosphodiesterase 10A 0.153487
FNDC3B fibronectin type III domain containing 3B 0.117317
TRIO trio Rho guanine nucleotide exchange factor 0.109766
ELL2 elongation factor, RNA polymerase II, 2 0.0980488
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0917904
KYNU kynureninase 0.0855126
RPS6 ribosomal protein S6 0.0772152
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0752798
JMJD1C jumonji domain containing 1C 0.0740691
AKAP12 A kinase (PRKA) anchor protein 12 0.0715109
MT2A metallothionein 2A 0.0663843
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0640729
ATP13A3 ATPase type 13A3 0.0629064
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0601812
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0584417
EIF1 eukaryotic translation initiation factor 1 0.0559293
CADM1 cell adhesion molecule 1 0.0537948
NAP1L1 nucleosome assembly protein 1-like 1 0.0512268
HELZ helicase with zinc finger 0.0509048
ADM adrenomedullin 0.0504689
RPL35A ribosomal protein L35a 0.0481493
SNX9 sorting nexin 9 0.0468129
RPL37A ribosomal protein L37a 0.0458006
WTAP Wilms tumor 1 associated protein 0.0442467
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0434762
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0434225
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.0429269
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0421607
RPL9 ribosomal protein L9 0.0417817
UGCG UDP-glucose ceramide glucosyltransferase 0.0412426
PTBP3 polypyrimidine tract binding protein 3 0.0393867
SPAG9 sperm associated antigen 9 0.0391391
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0387292
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.038042
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.0379664
FMNL2 formin-like 2 0.0376029
FOXO3 forkhead box O3 0.0373489
ESYT2 extended synaptotagmin-like protein 2 0.0367898
MARCKS myristoylated alanine-rich protein kinase C substrate 0.0362255
GLIS3 GLIS family zinc finger 3 0.0360699
ITCH itchy E3 ubiquitin protein ligase 0.0351456
FRMD4A FERM domain containing 4A 0.0343761
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0332098
PUM2 pumilio RNA-binding family member 2 0.0331842
AGTPBP1 ATP/GTP binding protein 1 0.0331793
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0329868
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0327516
SDK1 sidekick cell adhesion molecule 1 0.032365
MAPK8 mitogen-activated protein kinase 8 0.0318219
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0311138
RB1CC1 RB1-inducible coiled-coil 1 0.0310643
MMP12 matrix metallopeptidase 12 0.0309444
SNX14 sorting nexin 14 0.0301415
RPL35 ribosomal protein L35 0.0300783
USP9X ubiquitin specific peptidase 9, X-linked 0.0296098
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0294322
RPL19 ribosomal protein L19 0.0293503
B4GALT1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 0.0292082
RPS21 ribosomal protein S21 0.0286075
RPL11 ribosomal protein L11 0.0284352
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0282941
GNA13 guanine nucleotide binding protein (G protein), alpha 13 0.0282266
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0278219
TOP1 topoisomerase (DNA) I 0.0276554
PPARD peroxisome proliferator-activated receptor delta 0.0275183
DUSP5 dual specificity phosphatase 5 0.0270563
OGA O-GlcNAcase 0.0269027
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0268854
PGK1 phosphoglycerate kinase 1 0.0267532
AFDN afadin, adherens junction formation factor 0.0265117
PHIP pleckstrin homology domain interacting protein 0.026277
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0262596
KLHL24 kelch-like family member 24 0.0259075
IL1RAP interleukin 1 receptor accessory protein 0.0259065
WSB1 WD repeat and SOCS box containing 1 0.0259017
ANKRD28 ankyrin repeat domain 28 0.0257915
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0257191
ACO1 aconitase 1, soluble 0.0256267
SETD5 SET domain containing 5 0.0255602
ABTB3 ankyrin repeat and BTB domain containing 3 0.0255542
CAB39 calcium binding protein 39 0.0254512
KLF6 Kruppel-like factor 6 0.0253335
IRAK2 interleukin-1 receptor-associated kinase 2 0.0252434
NGLY1 N-glycanase 1 0.0251906
FNIP1 folliculin interacting protein 1 0.0250755
AFF3 AF4/FMR2 family, member 3 0.0248336
FBXL20 F-box and leucine-rich repeat protein 20 0.0246648
RPS14 ribosomal protein S14 0.0242188
TPT1 tumor protein, translationally-controlled 1 0.0241347
DENND5A DENN/MADD domain containing 5A 0.0235271
PCBP3 poly(rC) binding protein 3 0.0235083
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0234311
MARCHF6 membrane associated ring-CH-type finger 6 0.0233085
RNF24 ring finger protein 24 0.0232431
RASA2 RAS p21 protein activator 2 0.0231417
RPS13 ribosomal protein S13 0.0231298
TNPO1 transportin 1 0.022743
ZNRF1 zinc and ring finger 1, E3 ubiquitin protein ligase 0.0226594
NEK7 NIMA-related kinase 7 0.0225766

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.22262
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.170178
EEF2 eukaryotic translation elongation factor 2 -0.140859
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0900742
FTH1 ferritin, heavy polypeptide 1 -0.0881305
EGR1 early growth response 1 -0.0853806
SOD2 superoxide dismutase 2, mitochondrial -0.0840661
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0660516
ENO1 enolase 1, (alpha) -0.0643296
CALR calreticulin -0.0640084
AHNAK AHNAK nucleoprotein -0.0634247
VEGFA vascular endothelial growth factor A -0.0634124
MYH9 myosin, heavy chain 9, non-muscle -0.0632349
TXNIP thioredoxin interacting protein -0.0578449
LDHA lactate dehydrogenase A -0.05336
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0508684
NDRG1 N-myc downstream regulated 1 -0.0508372
SFTPA2 surfactant protein A2 -0.050208
YBX1 Y box binding protein 1 -0.0496703
TAPBP TAP binding protein (tapasin) -0.048651
ICAM1 intercellular adhesion molecule 1 -0.0452388
MSN moesin -0.0451792
SQSTM1 sequestosome 1 -0.0451111
JUN jun proto-oncogene -0.0448229
FLNA filamin A, alpha -0.0434265
CANX calnexin -0.04267
VMP1 vacuole membrane protein 1 -0.0423433
VIM vimentin -0.0403291
UBC ubiquitin C -0.0391015
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0378055
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0371355
CSDE1 cold shock domain containing E1, RNA-binding -0.0369423
CD44 CD44 molecule (Indian blood group) -0.0367502
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0365502
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0361824
ASPH aspartate beta-hydroxylase -0.0361505
VCL vinculin -0.0357116
THBS1 thrombospondin 1 -0.0354337
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0354017
COL6A3 collagen, type VI, alpha 3 -0.0349859
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0348373
MAP1B microtubule-associated protein 1B -0.0345493
CTSD cathepsin D -0.034281
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.033907
RPS2 ribosomal protein S2 -0.0335778
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0332936
C3 complement component 3 -0.0331107
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.032985
TPM4 tropomyosin 4 -0.0328206
OPTN optineurin -0.0327759
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0325415
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0323368
COL1A2 collagen, type I, alpha 2 -0.031894
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0318116
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0315017
FTL ferritin, light polypeptide -0.0310369
TXNRD1 thioredoxin reductase 1 -0.0309955
LAMP2 lysosomal-associated membrane protein 2 -0.0308503
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0293547
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0288332
HDLBP high density lipoprotein binding protein -0.0287135
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0282251
POTEF POTE ankyrin domain family, member F -0.0281575
NONO non-POU domain containing, octamer-binding -0.0276216
CTSA cathepsin A -0.0266866
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.026594
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0264108
ARF4 ADP-ribosylation factor 4 -0.025975
MACF1 microtubule-actin crosslinking factor 1 -0.0259497
ANXA2 annexin A2 -0.0253028
VCAN versican -0.0250993
TPM1 tropomyosin 1 (alpha) -0.0250936
MX1 MX dynamin-like GTPase 1 -0.0250778
NCOA7 nuclear receptor coactivator 7 -0.0250598
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0245874
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0244198
MCL1 myeloid cell leukemia 1 -0.0237324
EEF1G eukaryotic translation elongation factor 1 gamma -0.0234774
HLA-E major histocompatibility complex, class I, E -0.023408
RNF213 ring finger protein 213 -0.0233999
PKM pyruvate kinase, muscle -0.0232694
CLIC4 chloride intracellular channel 4 -0.0229218
TFG TRK-fused gene -0.022905
PDIA6 protein disulfide isomerase family A, member 6 -0.0226766
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0225443
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0225012
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0224082
LOC102724023 ES1 protein homolog, mitochondrial -0.0222233
APP amyloid beta (A4) precursor protein -0.0221738
BSG basigin (Ok blood group) -0.0220605
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0220438
MAML2 mastermind-like 2 (Drosophila) -0.0219197
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein -0.0217044
COL4A2 collagen, type IV, alpha 2 -0.0214052
PDE4D phosphodiesterase 4D, cAMP-specific -0.021365
GLIPR1 GLI pathogenesis-related 1 -0.0210344
TMCC1 transmembrane and coiled-coil domain family 1 -0.0207465
WASF2 WAS protein family, member 2 -0.0207273
VDAC1 voltage-dependent anion channel 1 -0.020641
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 -0.020636