Ranolazine_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ranolazine perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ranolazine_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CXCL8 chemokine (C-X-C motif) ligand 8 0.130336
NAMPT nicotinamide phosphoribosyltransferase 0.0747643
ITGA1 integrin, alpha 1 0.0715195
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0591775
RICTOR RPTOR independent companion of MTOR, complex 2 0.0517915
CD109 CD109 molecule 0.0469006
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0458649
DENND5B DENN/MADD domain containing 5B 0.0430337
RNF145 ring finger protein 145 0.0401598
TENT2 terminal nucleotidyltransferase 2 0.0400105
TRIO trio Rho guanine nucleotide exchange factor 0.0385245
GOLGA4 golgin A4 0.0376373
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0369872
COG5 component of oligomeric golgi complex 5 0.0354628
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0348759
SOS1 son of sevenless homolog 1 (Drosophila) 0.0348508
HELZ helicase with zinc finger 0.0334667
NIPBL Nipped-B homolog (Drosophila) 0.0331283
NAP1L1 nucleosome assembly protein 1-like 1 0.0323402
OGA O-GlcNAcase 0.0323297
SRP54 signal recognition particle 54kDa 0.0320736
ESYT2 extended synaptotagmin-like protein 2 0.0318294
IRAK3 interleukin-1 receptor-associated kinase 3 0.0315901
MARCHF6 membrane associated ring-CH-type finger 6 0.0314612
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.030578
PNISR PNN-interacting serine/arginine-rich protein 0.0305668
NUP58 nucleoporin 58 0.0305581
PELO pelota homolog (Drosophila) 0.0302754
TPR translocated promoter region, nuclear basket protein 0.0301643
SPAG9 sperm associated antigen 9 0.0282025
ZCCHC7 zinc finger, CCHC domain containing 7 0.0265954
CDC27 cell division cycle 27 0.0265606
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0264533
SETD5 SET domain containing 5 0.0261983
WAC WW domain containing adaptor with coiled-coil 0.0261019
SUCO SUN domain containing ossification factor 0.0260702
FOXO3 forkhead box O3 0.0260432
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0259998
NEK7 NIMA-related kinase 7 0.0259538
PUM2 pumilio RNA-binding family member 2 0.02535
TMEM165 transmembrane protein 165 0.0251219
EIF1 eukaryotic translation initiation factor 1 0.0249536
WDR45B WD repeat domain 45B 0.0244598
MIS18BP1 MIS18 binding protein 1 0.0243946
MAP3K9 mitogen-activated protein kinase kinase kinase 9 0.0243718
TM9SF3 transmembrane 9 superfamily member 3 0.0240311
MCTP2 multiple C2 domains, transmembrane 2 0.0238994
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0238765
UBE2H ubiquitin-conjugating enzyme E2H 0.0237781
CTBP2 C-terminal binding protein 2 0.0229074
ETNK1 ethanolamine kinase 1 0.0228118
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0227077
CAB39 calcium binding protein 39 0.0226783
SEC24A SEC24 family member A 0.0225852
EPS8 epidermal growth factor receptor pathway substrate 8 0.0225739
LCORL ligand dependent nuclear receptor corepressor-like 0.0222073
FOXJ3 forkhead box J3 0.0220989
SFXN1 sideroflexin 1 0.02182
RPS6 ribosomal protein S6 0.0216222
MT2A metallothionein 2A 0.0215377
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0212688
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0212571
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0211158
ZC3H12C zinc finger CCCH-type containing 12C 0.020733
WDR43 WD repeat domain 43 0.0207086
TRA2A transformer 2 alpha homolog (Drosophila) 0.0206841
ZEB2 zinc finger E-box binding homeobox 2 0.0206278
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.0206134
RB1CC1 RB1-inducible coiled-coil 1 0.0203493
CDC73 cell division cycle 73 0.0203135
RBM25 RNA binding motif protein 25 0.0201103
ATP13A3 ATPase type 13A3 0.0198552
ZMYM2 zinc finger, MYM-type 2 0.0198256
BIRC3 baculoviral IAP repeat containing 3 0.0197932
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0195616
PICALM phosphatidylinositol binding clathrin assembly protein 0.0194997
INSIG2 insulin induced gene 2 0.0194565
ZC3H11A zinc finger CCCH-type containing 11A 0.0192683
GPBP1 GC-rich promoter binding protein 1 0.0190888
SIK3 SIK family kinase 3 0.0188769
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.0187586
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0186877
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 0.0185301
CNOT2 CCR4-NOT transcription complex, subunit 2 0.0183752
RAB6A RAB6A, member RAS oncogene family 0.0183584
RPL37A ribosomal protein L37a 0.0182598
FNDC3B fibronectin type III domain containing 3B 0.0179198
FRYL FRY-like 0.0177659
SNX13 sorting nexin 13 0.0176989
RPS16 ribosomal protein S16 0.0176457
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0175215
NBAS neuroblastoma amplified sequence 0.0173578
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0172093
ANKRD28 ankyrin repeat domain 28 0.0171818
RAB1A RAB1A, member RAS oncogene family 0.0169015
PCBP2 poly(rC) binding protein 2 0.0168339
SEC23A Sec23 homolog A (S. cerevisiae) 0.0168215
GOLT1B golgi transport 1B 0.0168128
SS18 synovial sarcoma translocation, chromosome 18 0.0167069
CNOT4 CCR4-NOT transcription complex, subunit 4 0.0166928

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.253946
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.240338
NRG1 neuregulin 1 -0.146845
ASPH aspartate beta-hydroxylase -0.133145
NDRG1 N-myc downstream regulated 1 -0.0956706
EXT1 exostosin glycosyltransferase 1 -0.0924149
VCL vinculin -0.0815526
HMGA2 high mobility group AT-hook 2 -0.0706869
SQSTM1 sequestosome 1 -0.0647748
LOC102724023 ES1 protein homolog, mitochondrial -0.0588753
MAP1B microtubule-associated protein 1B -0.0587959
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0572289
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.054979
IFI27 interferon, alpha-inducible protein 27 -0.0538928
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0530214
POTEF POTE ankyrin domain family, member F -0.0514977
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0489506
EGR1 early growth response 1 -0.0486362
TXNIP thioredoxin interacting protein -0.048053
ACTG1 actin gamma 1 -0.0477193
TMSB10 thymosin beta 10 -0.0475081
SOX4 SRY (sex determining region Y)-box 4 -0.0466461
SYT1 synaptotagmin I -0.046518
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0449934
IFI16 interferon, gamma-inducible protein 16 -0.044559
VEGFA vascular endothelial growth factor A -0.0426551
HLA-B major histocompatibility complex, class I, B -0.0413053
PTMA prothymosin, alpha -0.0410843
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0402336
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0397569
FTH1 ferritin, heavy polypeptide 1 -0.0380269
TMSB4X thymosin beta 4, X-linked -0.0363566
NTN4 netrin 4 -0.0361764
ENO1 enolase 1, (alpha) -0.0359541
CANX calnexin -0.0353509
MCL1 myeloid cell leukemia 1 -0.0349782
RNF213 ring finger protein 213 -0.0348371
S100A6 S100 calcium binding protein A6 -0.0341684
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.033875
ACTN4 actinin, alpha 4 -0.0338223
TNNC1 troponin C type 1 (slow) -0.0337376
PALLD palladin, cytoskeletal associated protein -0.0336576
ETV1 ets variant 1 -0.0334678
LMNA lamin A/C -0.0331409
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0328467
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0327786
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.03273
VIM vimentin -0.0322499
GRB10 growth factor receptor-bound protein 10 -0.0321063
AKAP12 A kinase (PRKA) anchor protein 12 -0.0318541
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0318532
HMGA1 high mobility group AT-hook 1 -0.0315111
FTL ferritin, light polypeptide -0.0311171
STC2 stanniocalcin 2 -0.0309687
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.030525
IFI6 interferon, alpha-inducible protein 6 -0.0303914
HILPDA hypoxia inducible lipid droplet-associated -0.0300052
JUN jun proto-oncogene -0.0293013
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.029191
AHNAK AHNAK nucleoprotein -0.0290278
ERRFI1 ERBB receptor feedback inhibitor 1 -0.028976
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0285939
LOXL2 lysyl oxidase-like 2 -0.0276551
GLIS3 GLIS family zinc finger 3 -0.0265365
PLIN2 perilipin 2 -0.0265319
TPM4 tropomyosin 4 -0.0262528
DST dystonin -0.0259224
NCOA7 nuclear receptor coactivator 7 -0.0258323
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0256044
TSC22D1 TSC22 domain family, member 1 -0.0251707
GLUL glutamate-ammonia ligase -0.0249906
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0249592
TAGLN2 transgelin 2 -0.0249051
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0247847
SFRP1 secreted frizzled-related protein 1 -0.0247465
TM4SF1 transmembrane 4 L six family member 1 -0.0246934
FLNA filamin A, alpha -0.0246484
SFTPA2 surfactant protein A2 -0.0245949
ENO2 enolase 2 (gamma, neuronal) -0.0244611
MYH9 myosin, heavy chain 9, non-muscle -0.024291
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0240637
RRBP1 ribosome binding protein 1 -0.0239841
S100A10 S100 calcium binding protein A10 -0.0237391
CAPN2 calpain 2, (m/II) large subunit -0.0235287
H1-0 H1.0 linker histone -0.0233488
TMEM156 transmembrane protein 156 -0.022911
AHNAK2 AHNAK nucleoprotein 2 -0.0226845
TGFB1 transforming growth factor, beta 1 -0.0225375
CENPF centromere protein F, 350/400kDa -0.0224969
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.022476
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0221919
NAV1 neuron navigator 1 -0.0221219
MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2 -0.0221071
WDR1 WD repeat domain 1 -0.0218663
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0218574
CD44 CD44 molecule (Indian blood group) -0.0216599
IGFBP3 insulin-like growth factor binding protein 3 -0.0215119
MKI67 marker of proliferation Ki-67 -0.0214318
AEBP2 AE binding protein 2 -0.0214053
BSG basigin (Ok blood group) -0.0212759