Rapamycin_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rapamycin perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rapamycin_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PHF3 PHD finger protein 3 0.0958992
INTS6 integrator complex subunit 6 0.0895744
LMO7 LIM domain 7 0.0816575
PLSCR2 phospholipid scramblase 2 0.0520565
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0511492
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.050922
ANXA2 annexin A2 0.0436609
N4BP2L2 NEDD4 binding protein 2-like 2 0.0436042
STS steroid sulfatase (microsomal), isozyme S 0.039983
TSC22D1 TSC22 domain family, member 1 0.0379657
IGFBP3 insulin-like growth factor binding protein 3 0.0357395
ZSWIM6 zinc finger, SWIM-type containing 6 0.0339571
MCL1 myeloid cell leukemia 1 0.033364
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0319724
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0314892
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0306235
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.03052
POU2F2 POU class 2 homeobox 2 0.029592
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0294394
MLPH melanophilin 0.0292769
STK24 serine/threonine kinase 24 0.0285417
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0279699
SHB Src homology 2 domain containing adaptor protein B 0.0271218
TRIO trio Rho guanine nucleotide exchange factor 0.0262528
BICRAL BICRA like chromatin remodeling complex associated protein 0.0259924
EEF2 eukaryotic translation elongation factor 2 0.0252197
EZR ezrin 0.0246834
GOSR2 golgi SNAP receptor complex member 2 0.0243719
VEGFA vascular endothelial growth factor A 0.0242109
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0236332
SETX senataxin 0.023397
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 0.0229241
SMAD3 SMAD family member 3 0.0227264
NCEH1 neutral cholesterol ester hydrolase 1 0.0222318
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0221009
FTH1 ferritin, heavy polypeptide 1 0.02197
MCTP1 multiple C2 domains, transmembrane 1 0.021606
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.021382
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0213656
CDHR2 cadherin-related family member 2 0.0213526
EGFR epidermal growth factor receptor 0.0210626
TMC5 transmembrane channel-like 5 0.0195402
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0193412
SAMD12 sterile alpha motif domain containing 12 0.0192428
RAD51B RAD51 paralog B 0.0192298
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0190913
MYO10 myosin X 0.0188242
NABP1 nucleic acid binding protein 1 0.0186202
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0184862
IGF1R insulin-like growth factor 1 receptor 0.0182503
PSPC1 paraspeckle component 1 0.0180816
SRRM2 serine/arginine repetitive matrix 2 0.0179343
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0178028
ZHX2 zinc fingers and homeoboxes 2 0.0174366
VMP1 vacuole membrane protein 1 0.017084
MYH9 myosin, heavy chain 9, non-muscle 0.0166337
SEPTIN9 septin 9 0.0162209
COG3 component of oligomeric golgi complex 3 0.0161461
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0161333
NUP98 nucleoporin 98kDa 0.0160141
KDM4C lysine (K)-specific demethylase 4C 0.0153513
TNRC18 trinucleotide repeat containing 18 0.0152168
UBAP2 ubiquitin associated protein 2 0.0151784
TNS4 tensin 4 0.0151407
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.015111
ACTN1 actinin, alpha 1 0.0150631
KIF16B kinesin family member 16B 0.0149966
CEMIP2 cell migration inducing hyaluronidase 2 0.0147038
TUFT1 tuftelin 1 0.0146573
TMEM65 transmembrane protein 65 0.0144391
DOCK1 dedicator of cytokinesis 1 0.0143759
TSPYL2 TSPY-like 2 0.014167
MYO5B myosin VB 0.0141443
MYO1E myosin IE 0.0140859
TBC1D15 TBC1 domain family, member 15 0.0139698
EXOC4 exocyst complex component 4 0.013844
LARP4B La ribonucleoprotein domain family, member 4B 0.0138332
CFAP44 cilia and flagella associated protein 44 0.0137945
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0134761
BRD9 bromodomain containing 9 0.0132593
N4BP2L1 NEDD4 binding protein 2-like 1 0.0132031
SZT2 seizure threshold 2 homolog (mouse) 0.0131718
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0131278
DPP4 dipeptidyl-peptidase 4 0.0130858
GOLGA3 golgin A3 0.0128222
GALK2 galactokinase 2 0.0127583
SERINC5 serine incorporator 5 0.0127437
ANKMY1 ankyrin repeat and MYND domain containing 1 0.0126436
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like 0.0125315
EPHA2 EPH receptor A2 0.0124132
JAK1 Janus kinase 1 0.01234
SDCBP syndecan binding protein (syntenin) 0.0123286
KIAA1671 KIAA1671 0.0123087
GON4L gon-4-like (C. elegans) 0.012242
KDM6A lysine (K)-specific demethylase 6A 0.0121509
KAZN kazrin, periplakin interacting protein 0.0121188
RHPN2 rhophilin, Rho GTPase binding protein 2 0.0120992
OTUD5 OTU deubiquitinase 5 0.0120491
WWOX WW domain containing oxidoreductase 0.0119776
PDZD8 PDZ domain containing 8 0.011975

decreased expression

Symbol Name Standardized Value
B2M beta-2-microglobulin -0.22598
TPT1 tumor protein, translationally-controlled 1 -0.186603
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.165526
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.156134
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.128168
HLA-B major histocompatibility complex, class I, B -0.125937
PTMA prothymosin, alpha -0.1155
LCN2 lipocalin 2 -0.0961257
H1-0 H1.0 linker histone -0.0864577
IFI6 interferon, alpha-inducible protein 6 -0.0732492
TMSB10 thymosin beta 10 -0.0684024
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0621231
RHOBTB3 Rho-related BTB domain containing 3 -0.0616557
MACC1 metastasis associated in colon cancer 1 -0.0609515
IFI27 interferon, alpha-inducible protein 27 -0.0600394
ZMYND8 zinc finger, MYND-type containing 8 -0.0595334
C6ORF132 chromosome 6 open reading frame 132 -0.0589812
BTBD9 BTB (POZ) domain containing 9 -0.0566166
MT2A metallothionein 2A -0.0555764
UBC ubiquitin C -0.0552737
PDIA3 protein disulfide isomerase family A, member 3 -0.054003
XAF1 XIAP associated factor 1 -0.0518814
RNF149 ring finger protein 149 -0.0507447
TXNIP thioredoxin interacting protein -0.0504856
RPL35A ribosomal protein L35a -0.0498807
PERP PERP, TP53 apoptosis effector -0.0498431
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0494603
S100A6 S100 calcium binding protein A6 -0.0475368
PTBP3 polypyrimidine tract binding protein 3 -0.0469584
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0457429
RUNX1 runt-related transcription factor 1 -0.0457348
HLA-C major histocompatibility complex, class I, C -0.0453196
LYZ lysozyme -0.0453121
RPS6 ribosomal protein S6 -0.0448719
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.044682
KLF6 Kruppel-like factor 6 -0.0445607
LOC102724023 ES1 protein homolog, mitochondrial -0.0444458
FTL ferritin, light polypeptide -0.0442548
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0439478
SLC38A1 solute carrier family 38, member 1 -0.0434816
LOC112694756 uncharaterized LOC112694756 -0.0430957
WSB1 WD repeat and SOCS box containing 1 -0.0427213
MKI67 marker of proliferation Ki-67 -0.0424744
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0421898
RPL23 ribosomal protein L23 -0.0416693
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0410704
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0409564
RPS24 ribosomal protein S24 -0.0409355
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0404168
NDRG1 N-myc downstream regulated 1 -0.0397865
RPL12 ribosomal protein L12 -0.0397122
RPS8 ribosomal protein S8 -0.0396839
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0396279
UBR2 ubiquitin protein ligase E3 component n-recognin 2 -0.0396
RPS19 ribosomal protein S19 -0.0390091
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0384154
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0384139
KRT19 keratin 19, type I -0.0380174
ARHGAP5 Rho GTPase activating protein 5 -0.0378891
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0378255
NPEPPS aminopeptidase puromycin sensitive -0.0375675
EPSTI1 epithelial stromal interaction 1 (breast) -0.0374525
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0372699
ABLIM1 actin binding LIM protein 1 -0.037036
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.036742
CANX calnexin -0.0366511
H3-3B H3.3 histone B -0.0364578
EPCAM epithelial cell adhesion molecule -0.0363852
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0362157
PTGR1 prostaglandin reductase 1 -0.0361196
ENO1 enolase 1, (alpha) -0.0359815
APOL1 apolipoprotein L, 1 -0.0357073
RRBP1 ribosome binding protein 1 -0.0352677
CALR calreticulin -0.0352472
RPL34 ribosomal protein L34 -0.0351909
ASPH aspartate beta-hydroxylase -0.0349129
EIF1 eukaryotic translation initiation factor 1 -0.0348723
GNAS GNAS complex locus -0.0348322
RPL19 ribosomal protein L19 -0.0344569
RPLP1 ribosomal protein, large, P1 -0.0342755
GCC2 GRIP and coiled-coil domain containing 2 -0.0342631
DIAPH3 diaphanous-related formin 3 -0.0340824
IFITM3 interferon induced transmembrane protein 3 -0.0336096
AHNAK AHNAK nucleoprotein -0.0333779
TMPRSS4 transmembrane protease, serine 4 -0.0333456
RPL7L1 ribosomal protein L7-like 1 -0.032708
TPI1 triosephosphate isomerase 1 -0.0323742
PRKCA protein kinase C, alpha -0.031941
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0317009
LDHA lactate dehydrogenase A -0.0316088
DSTN destrin (actin depolymerizing factor) -0.0312764
MBNL2 muscleblind-like splicing regulator 2 -0.0312303
WDR45B WD repeat domain 45B -0.0309995
PDIA4 protein disulfide isomerase family A, member 4 -0.0309681
NCKAP5 NCK-associated protein 5 -0.0307481
S100A10 S100 calcium binding protein A10 -0.0300485
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0300065
ACBD3 acyl-CoA binding domain containing 3 -0.0299886
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0296067
VDAC1 voltage-dependent anion channel 1 -0.0295431