Rapamycin_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rapamycin perturbation in LS 180 cell line (Tahoe Therapeutics)
Similar Terms
Downloads & Tools

Genes

200 genes differentially expressed following the Rapamycin_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FAT1 FAT atypical cadherin 1 0.10805
DSPP dentin sialophosphoprotein 0.0637994
EEF2 eukaryotic translation elongation factor 2 0.0567561
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0515774
VEGFA vascular endothelial growth factor A 0.0500271
EZR ezrin 0.0482775
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0464396
KRT8 keratin 8, type II 0.045356
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0439121
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0420003
PTPRR protein tyrosine phosphatase, receptor type, R 0.0402134
KRT18 keratin 18, type I 0.0381213
HSPA8 heat shock 70kDa protein 8 0.0377241
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0371072
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0340904
FTH1 ferritin, heavy polypeptide 1 0.0325355
ABHD2 abhydrolase domain containing 2 0.0306653
ONECUT3 one cut homeobox 3 0.029034
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0280381
KCNK1 potassium channel, two pore domain subfamily K, member 1 0.0263515
TPM3 tropomyosin 3 0.0262016
LMO7 LIM domain 7 0.0259994
IQGAP1 IQ motif containing GTPase activating protein 1 0.0258665
FLNB filamin B, beta 0.0253159
NDRG1 N-myc downstream regulated 1 0.0243041
FAM13A family with sequence similarity 13, member A 0.0239693
DSG2 desmoglein 2 0.0232975
CDCP1 CUB domain containing protein 1 0.0231685
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0229963
RPL3 ribosomal protein L3 0.0229432
ITGB4 integrin, beta 4 0.0227831
PLEC plectin 0.0226321
ASPH aspartate beta-hydroxylase 0.0211652
EHF ets homologous factor 0.0205731
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0202055
CALB1 calbindin 1, 28kDa 0.0198245
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.019595
CEMIP cell migration inducing protein, hyaluronan binding 0.0194383
EIF4B eukaryotic translation initiation factor 4B 0.0191153
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0187407
KDM7A lysine (K)-specific demethylase 7A 0.0185079
KLF3 Kruppel-like factor 3 (basic) 0.0179935
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0179029
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0176859
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B 0.0176501
CANX calnexin 0.0175985
ITPRID2 ITPR interacting domain containing 2 0.0175507
BACE2 beta-site APP-cleaving enzyme 2 0.0173711
MUC17 mucin 17, cell surface associated 0.0168853
ANXA2 annexin A2 0.0167736
RPL21 ribosomal protein L21 0.0161916
ARHGAP5 Rho GTPase activating protein 5 0.0161749
RPS18 ribosomal protein S18 0.0161683
LIMCH1 LIM and calponin homology domains 1 0.0159911
PARD3B par-3 family cell polarity regulator beta 0.0158686
PDE4D phosphodiesterase 4D, cAMP-specific 0.0158652
HDLBP high density lipoprotein binding protein 0.0158075
TMSB4X thymosin beta 4, X-linked 0.0157505
AHNAK AHNAK nucleoprotein 0.0157343
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0157119
LAMC2 laminin, gamma 2 0.0155226
ZNF292 zinc finger protein 292 0.0154033
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0153964
GREB1L growth regulation by estrogen in breast cancer-like 0.0153199
PTEN phosphatase and tensin homolog 0.0151043
FERMT1 fermitin family member 1 0.0149489
PSD3 pleckstrin and Sec7 domain containing 3 0.0148665
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0147223
AFF1 AF4/FMR2 family, member 1 0.0146652
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0145864
PGK1 phosphoglycerate kinase 1 0.0145672
GOLGB1 golgin B1 0.0145665
MXI1 MAX interactor 1, dimerization protein 0.01437
RPL29 ribosomal protein L29 0.0143339
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0140731
CLCN3 chloride channel, voltage-sensitive 3 0.0140682
PATJ PATJ crumbs cell polarity complex component 0.0140675
PRSS3 protease, serine, 3 0.0139995
PHF3 PHD finger protein 3 0.0139356
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0138334
EGFR epidermal growth factor receptor 0.0136754
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0136337
FOXP1 forkhead box P1 0.0134987
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0133662
AXIN2 axin 2 0.013315
RPL18 ribosomal protein L18 0.0132508
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.012671
TBC1D5 TBC1 domain family, member 5 0.0126139
KTN1 kinectin 1 (kinesin receptor) 0.0125106
CCSER1 coiled-coil serine-rich protein 1 0.0124728
SH3D19 SH3 domain containing 19 0.0124606
INSR insulin receptor 0.0124203
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0122183
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0120728
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0120574
ABHD17C abhydrolase domain containing 17C 0.0120558
PDIA4 protein disulfide isomerase family A, member 4 0.0118328
CSDE1 cold shock domain containing E1, RNA-binding 0.0117984
SPRED1 sprouty-related, EVH1 domain containing 1 0.0117889
SLC6A20 solute carrier family 6 (proline IMINO transporter), member 20 0.0117523

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.229737
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.142401
TMSB10 thymosin beta 10 -0.127008
VCL vinculin -0.107509
TPT1 tumor protein, translationally-controlled 1 -0.107456
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.102219
RPL35A ribosomal protein L35a -0.0937837
GMDS GDP-mannose 4,6-dehydratase -0.0801126
GPHN gephyrin -0.0616751
FTL ferritin, light polypeptide -0.0570666
RPS6 ribosomal protein S6 -0.0565377
RPS8 ribosomal protein S8 -0.0556226
ACTG1 actin gamma 1 -0.054747
RPL9 ribosomal protein L9 -0.0525025
RPS29 ribosomal protein S29 -0.0519152
RPLP1 ribosomal protein, large, P1 -0.0458337
RPS24 ribosomal protein S24 -0.0457993
IER3 immediate early response 3 -0.0437689
RPLP2 ribosomal protein, large, P2 -0.0420797
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0419697
RPS23 ribosomal protein S23 -0.0406189
RPL37A ribosomal protein L37a -0.0403032
RPL31 ribosomal protein L31 -0.0398433
PDLIM5 PDZ and LIM domain 5 -0.0383121
LOC102724023 ES1 protein homolog, mitochondrial -0.0381591
MUC6 mucin 6, oligomeric mucus/gel-forming -0.0381138
RPS13 ribosomal protein S13 -0.0378205
RPL34 ribosomal protein L34 -0.0373839
EXT1 exostosin glycosyltransferase 1 -0.0371885
RPL11 ribosomal protein L11 -0.0370829
S100P S100 calcium binding protein P -0.0370451
RPS27A ribosomal protein S27a -0.03657
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0361927
EGR1 early growth response 1 -0.0350468
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -0.0336819
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0332492
RPL38 ribosomal protein L38 -0.0329859
AGR2 anterior gradient 2 -0.0315576
EIF1 eukaryotic translation initiation factor 1 -0.0314389
PNISR PNN-interacting serine/arginine-rich protein -0.0313167
ATP5F1B ATP synthase F1 subunit beta -0.0311321
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0306999
AREG amphiregulin -0.0292488
S100A10 S100 calcium binding protein A10 -0.0288641
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0288176
RPS25 ribosomal protein S25 -0.0285882
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0284231
RPL23 ribosomal protein L23 -0.0282701
IARS1 isoleucyl-tRNA synthetase 1 -0.0279224
RAB1A RAB1A, member RAS oncogene family -0.0263801
RPL19 ribosomal protein L19 -0.026218
VDAC1 voltage-dependent anion channel 1 -0.0260777
VMP1 vacuole membrane protein 1 -0.0258034
RPS3 ribosomal protein S3 -0.0256303
RAB10 RAB10, member RAS oncogene family -0.0255399
RBM39 RNA binding motif protein 39 -0.025046
RPS19 ribosomal protein S19 -0.024659
RPS11 ribosomal protein S11 -0.0246242
MBNL1 muscleblind-like splicing regulator 1 -0.0245006
TRIM2 tripartite motif containing 2 -0.0243689
EIF5B eukaryotic translation initiation factor 5B -0.0242997
SETD5 SET domain containing 5 -0.024073
UQCRB ubiquinol-cytochrome c reductase binding protein -0.02406
RPL7A ribosomal protein L7a -0.0238207
USP53 ubiquitin specific peptidase 53 -0.023589
SEC31A SEC31 homolog A (S. cerevisiae) -0.0235882
RPL36 ribosomal protein L36 -0.0234847
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0234365
RPL28 ribosomal protein L28 -0.0233824
RPL5 ribosomal protein L5 -0.0232902
FBXO11 F-box protein 11 -0.0231821
FDPS farnesyl diphosphate synthase -0.0229707
RPS21 ribosomal protein S21 -0.02287
GNAS GNAS complex locus -0.0226975
ATF4 activating transcription factor 4 -0.0226048
EPCAM epithelial cell adhesion molecule -0.0225722
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0222901
GARS1 glycyl-tRNA synthetase 1 -0.0220911
HMGB1 high mobility group box 1 -0.0218711
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0215623
H3-3B H3.3 histone B -0.0214623
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0213759
ANKRD11 ankyrin repeat domain 11 -0.0213441
MYO1E myosin IE -0.0212449
KPNB1 karyopherin (importin) beta 1 -0.0212408
RPL37 ribosomal protein L37 -0.0210415
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0207452
SLC38A2 solute carrier family 38, member 2 -0.0207184
RPS20 ribosomal protein S20 -0.0205225
INSIG1 insulin induced gene 1 -0.020416
NAP1L1 nucleosome assembly protein 1-like 1 -0.0202671
POMP proteasome maturation protein -0.0202251
TRA2A transformer 2 alpha homolog (Drosophila) -0.0201732
ADIPOR2 adiponectin receptor 2 -0.0201583
B2M beta-2-microglobulin -0.0199824
NOP58 NOP58 ribonucleoprotein -0.0198771
NCOR1 nuclear receptor corepressor 1 -0.0198769
ZFAND3 zinc finger, AN1-type domain 3 -0.019846
RPL27A ribosomal protein L27a -0.0197704
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 -0.0197519