Rapamycin_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rapamycin perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rapamycin_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.117327
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.108989
TP63 tumor protein p63 0.095567
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0893224
ANGPTL4 angiopoietin-like 4 0.0881931
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0868501
CAPRIN2 caprin family member 2 0.0861462
TM4SF1 transmembrane 4 L six family member 1 0.0800918
ZDHHC14 zinc finger, DHHC-type containing 14 0.0720569
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0719647
ERRFI1 ERBB receptor feedback inhibitor 1 0.0673792
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0660806
RUNX1 runt-related transcription factor 1 0.0653712
RIGI RNA sensor RIG-I 0.0606109
FTH1 ferritin, heavy polypeptide 1 0.0600748
TPT1 tumor protein, translationally-controlled 1 0.0587694
MT1X metallothionein 1X 0.058044
RPS12 ribosomal protein S12 0.0557234
CADM2 cell adhesion molecule 2 0.0526724
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.052216
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0518518
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.051405
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0495509
HDAC9 histone deacetylase 9 0.0493151
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0478271
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0474302
SP100 SP100 nuclear antigen 0.0472704
PLSCR1 phospholipid scramblase 1 0.0472508
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0461314
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0450229
PYGL phosphorylase, glycogen, liver 0.0437188
CSMD3 CUB and Sushi multiple domains 3 0.0428366
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0405067
RPL26 ribosomal protein L26 0.0403402
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0402998
PDE10A phosphodiesterase 10A 0.0385391
APP amyloid beta (A4) precursor protein 0.0378274
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.03727
RPS3 ribosomal protein S3 0.0345767
RPL12 ribosomal protein L12 0.0344047
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0325308
HLA-E major histocompatibility complex, class I, E 0.0322638
ARHGAP5 Rho GTPase activating protein 5 0.03204
RNF213 ring finger protein 213 0.0320309
TSC22D1 TSC22 domain family, member 1 0.0317663
JUN jun proto-oncogene 0.0309093
MACF1 microtubule-actin crosslinking factor 1 0.0295612
PCDH1 protocadherin 1 0.0285465
IFIH1 interferon induced with helicase C domain 1 0.0284611
SLK STE20-like kinase 0.0280637
AMPD3 adenosine monophosphate deaminase 3 0.0278625
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0278167
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0275667
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0274047
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0272723
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0271988
RSAD2 radical S-adenosyl methionine domain containing 2 0.0266703
MT1E metallothionein 1E 0.0264338
HMGA1 high mobility group AT-hook 1 0.026347
NDRG1 N-myc downstream regulated 1 0.0258462
THSD4 thrombospondin, type I, domain containing 4 0.0257593
NAMPT nicotinamide phosphoribosyltransferase 0.0256107
PMP22 peripheral myelin protein 22 0.0255961
TRIM56 tripartite motif containing 56 0.0254425
BIRC3 baculoviral IAP repeat containing 3 0.0250762
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0250084
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0249565
EEF2 eukaryotic translation elongation factor 2 0.0245101
VEGFA vascular endothelial growth factor A 0.023666
MT2A metallothionein 2A 0.0236253
TPRG1 tumor protein p63 regulated 1 0.023483
DPH6 diphthamine biosynthesis 6 0.0230325
TNS3 tensin 3 0.0223802
ERCC1 excision repair cross-complementation group 1 0.0222353
HOOK2 hook microtubule-tethering protein 2 0.0221616
FMNL2 formin-like 2 0.0221083
IFI6 interferon, alpha-inducible protein 6 0.0217379
AGTPBP1 ATP/GTP binding protein 1 0.0216652
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0214948
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.021432
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.020957
GYS1 glycogen synthase 1 (muscle) 0.0207435
PIAS2 protein inhibitor of activated STAT, 2 0.0207276
PRKCE protein kinase C, epsilon 0.0206317
NIBAN2 niban apoptosis regulator 2 0.0205431
SDK1 sidekick cell adhesion molecule 1 0.0203919
CXCL8 chemokine (C-X-C motif) ligand 8 0.02017
SEC24A SEC24 family member A 0.020067
MLPH melanophilin 0.019942
KLF6 Kruppel-like factor 6 0.0198727
ESYT2 extended synaptotagmin-like protein 2 0.0196074
PLIN2 perilipin 2 0.0194568
ITGB3BP integrin beta 3 binding protein (beta3-endonexin) 0.019348
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0193394
MCTP1 multiple C2 domains, transmembrane 1 0.0192445
DTX3L deltex 3 like, E3 ubiquitin ligase 0.0189862
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.018952
ARL4C ADP-ribosylation factor-like 4C 0.0188128
EMP1 epithelial membrane protein 1 0.0186628
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0186502

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.297051
PTMA prothymosin, alpha -0.163756
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.115135
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.106401
TMSB10 thymosin beta 10 -0.097459
POTEF POTE ankyrin domain family, member F -0.0879677
CENPF centromere protein F, 350/400kDa -0.0849827
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0745541
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0729562
SLC38A2 solute carrier family 38, member 2 -0.0710052
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.064267
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0617419
ACTG1 actin gamma 1 -0.0612159
MKI67 marker of proliferation Ki-67 -0.0579484
GARS1 glycyl-tRNA synthetase 1 -0.0509667
FTL ferritin, light polypeptide -0.0478132
TXNRD1 thioredoxin reductase 1 -0.0466179
SRGN serglycin -0.045504
SMC4 structural maintenance of chromosomes 4 -0.0454744
ZNF217 zinc finger protein 217 -0.043867
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0437812
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0436356
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0427897
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.041418
ECT2 epithelial cell transforming 2 -0.040419
ANLN anillin, actin binding protein -0.0403465
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0397796
HDLBP high density lipoprotein binding protein -0.0395959
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0392934
ADGRG6 adhesion G protein-coupled receptor G6 -0.0390572
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0381713
NCEH1 neutral cholesterol ester hydrolase 1 -0.0378493
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0376701
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0375618
AHNAK AHNAK nucleoprotein -0.0374397
CKAP5 cytoskeleton associated protein 5 -0.0373834
LOC112694756 uncharaterized LOC112694756 -0.0373057
ANKRD11 ankyrin repeat domain 11 -0.0370308
CMIP c-Maf inducing protein -0.036423
RPL35A ribosomal protein L35a -0.0364221
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0362823
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0362621
RBM39 RNA binding motif protein 39 -0.0351481
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0334849
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0330957
DIAPH3 diaphanous-related formin 3 -0.0330822
TRA2A transformer 2 alpha homolog (Drosophila) -0.0327633
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.031636
SMAD3 SMAD family member 3 -0.0315885
YBX1 Y box binding protein 1 -0.0315436
OGA O-GlcNAcase -0.0311113
RCOR1 REST corepressor 1 -0.0308349
RBM25 RNA binding motif protein 25 -0.0307923
KPNB1 karyopherin (importin) beta 1 -0.0303773
WASF2 WAS protein family, member 2 -0.0301064
KDM3A lysine (K)-specific demethylase 3A -0.0297686
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0294707
DCAF6 DDB1 and CUL4 associated factor 6 -0.0294141
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0294
TPX2 TPX2, microtubule-associated -0.028589
WDR45B WD repeat domain 45B -0.0279847
ARHGAP29 Rho GTPase activating protein 29 -0.0279403
AFF4 AF4/FMR2 family, member 4 -0.0278738
MARCHF6 membrane associated ring-CH-type finger 6 -0.0278406
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.02778
MARCHF7 membrane associated ring-CH-type finger 7 -0.0277139
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 -0.0277019
EZR ezrin -0.0274977
TSC22D2 TSC22 domain family, member 2 -0.0271114
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.027086
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.026473
MAP4 microtubule-associated protein 4 -0.0264628
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0260303
RPL38 ribosomal protein L38 -0.0259568
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0259021
VIM vimentin -0.0258945
VCL vinculin -0.0255641
USP34 ubiquitin specific peptidase 34 -0.0254086
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0253283
TRIP12 thyroid hormone receptor interactor 12 -0.0253136
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0252939
PFN1 profilin 1 -0.0252743
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0252383
TMEM123 transmembrane protein 123 -0.0249094
GOLGA4 golgin A4 -0.0248543
TOP1 topoisomerase (DNA) I -0.0248255
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) -0.0246223
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0245102
BRD4 bromodomain containing 4 -0.0243212
KIF14 kinesin family member 14 -0.0242087
KMT2C lysine (K)-specific methyltransferase 2C -0.0241639
CLTC clathrin, heavy chain (Hc) -0.0240882
XPO1 exportin 1 -0.0240721
BRWD1 bromodomain and WD repeat domain containing 1 -0.0238885
FNIP1 folliculin interacting protein 1 -0.0236654
MIS18BP1 MIS18 binding protein 1 -0.0235257
ZFAND3 zinc finger, AN1-type domain 3 -0.0234777
CKAP2 cytoskeleton associated protein 2 -0.023385
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 -0.0231255
RAI1 retinoic acid induced 1 -0.0230534