Rapamycin_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rapamycin perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rapamycin_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PM20D1 peptidase M20 domain containing 1 0.124316
KYNU kynureninase 0.0975145
SMOC1 SPARC related modular calcium binding 1 0.0944186
EEF2 eukaryotic translation elongation factor 2 0.0851201
COL8A1 collagen, type VIII, alpha 1 0.0782449
ZSWIM6 zinc finger, SWIM-type containing 6 0.0680277
PDLIM5 PDZ and LIM domain 5 0.0668208
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0632722
PDE10A phosphodiesterase 10A 0.0624403
CTIF CBP80/20-dependent translation initiation factor 0.0587485
FMNL2 formin-like 2 0.058388
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0579517
FNDC3B fibronectin type III domain containing 3B 0.0565136
FTH1 ferritin, heavy polypeptide 1 0.0555054
PCBP2 poly(rC) binding protein 2 0.0552462
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0547905
VCL vinculin 0.052488
DOCK4 dedicator of cytokinesis 4 0.0511432
TGFBR1 transforming growth factor, beta receptor 1 0.0495735
SMAD2 SMAD family member 2 0.0488456
INTS6 integrator complex subunit 6 0.0485862
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0441726
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0435225
SPAG9 sperm associated antigen 9 0.0418871
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0414887
ITPK1 inositol-tetrakisphosphate 1-kinase 0.0409045
MYOF myoferlin 0.0400189
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0397545
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0394429
SH3KBP1 SH3-domain kinase binding protein 1 0.0384577
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0384392
AUTS2 autism susceptibility candidate 2 0.038414
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0381895
AKAP13 A kinase (PRKA) anchor protein 13 0.0381092
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0367811
CXCL8 chemokine (C-X-C motif) ligand 8 0.0364827
FLNA filamin A, alpha 0.0359848
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0347538
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.034245
CHD1 chromodomain helicase DNA binding protein 1 0.0336259
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0332574
BMP6 bone morphogenetic protein 6 0.0329628
IGFBP3 insulin-like growth factor binding protein 3 0.0329622
RAB7A RAB7A, member RAS oncogene family 0.0327133
EPHA4 EPH receptor A4 0.0303548
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0302226
MCTP1 multiple C2 domains, transmembrane 1 0.0301095
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0297829
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0292373
NCOR2 nuclear receptor corepressor 2 0.0291895
GRAMD1B GRAM domain containing 1B 0.0289632
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0289215
POTEF POTE ankyrin domain family, member F 0.0280809
DST dystonin 0.0280058
CTBP2 C-terminal binding protein 2 0.0279056
FNIP1 folliculin interacting protein 1 0.0272983
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0264436
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.026357
HDAC4 histone deacetylase 4 0.0251403
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0246987
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0246805
LAMA5 laminin, alpha 5 0.0244045
OXSR1 oxidative stress responsive 1 0.0241387
ELL2 elongation factor, RNA polymerase II, 2 0.0239675
TRIO trio Rho guanine nucleotide exchange factor 0.0239244
IRS2 insulin receptor substrate 2 0.0226885
TRA2A transformer 2 alpha homolog (Drosophila) 0.0226557
ANTXR1 anthrax toxin receptor 1 0.022577
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0222786
ATXN1 ataxin 1 0.0222342
EZR ezrin 0.0221845
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0219796
AADAC arylacetamide deacetylase 0.0219496
B4GALT1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 0.0218216
HILPDA hypoxia inducible lipid droplet-associated 0.0216867
NUP58 nucleoporin 58 0.0215933
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0214914
PRKN parkin RBR E3 ubiquitin protein ligase 0.0213646
SQSTM1 sequestosome 1 0.0213638
EXT1 exostosin glycosyltransferase 1 0.0213523
COPA coatomer protein complex, subunit alpha 0.0213294
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0211474
WAC WW domain containing adaptor with coiled-coil 0.0207365
HELZ helicase with zinc finger 0.0207216
BASP1 brain abundant, membrane attached signal protein 1 0.0204842
BSG basigin (Ok blood group) 0.020453
PTPRM protein tyrosine phosphatase, receptor type, M 0.0204172
FAM168A family with sequence similarity 168, member A 0.0202066
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0202025
FOXK1 forkhead box K1 0.0201025
RNF145 ring finger protein 145 0.0198599
MAFK v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K 0.0197881
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0197392
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0195872
LDHA lactate dehydrogenase A 0.0194436
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) 0.0193697
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0192589
RAD51B RAD51 paralog B 0.0192098
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0190457
FBXL7 F-box and leucine-rich repeat protein 7 0.0190126

decreased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase -0.165903
EFNA5 ephrin-A5 -0.125245
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.120514
TM4SF1 transmembrane 4 L six family member 1 -0.112784
VIM vimentin -0.108623
TPT1 tumor protein, translationally-controlled 1 -0.10225
PTMA prothymosin, alpha -0.0939288
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0887711
TXNRD1 thioredoxin reductase 1 -0.0850512
FN1 fibronectin 1 -0.0794781
GDA guanine deaminase -0.077785
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0755108
TFPI2 tissue factor pathway inhibitor 2 -0.0743051
RPS6 ribosomal protein S6 -0.0709614
CTSL cathepsin L -0.0680371
TMSB10 thymosin beta 10 -0.0633375
RPLP1 ribosomal protein, large, P1 -0.0622777
RPL26 ribosomal protein L26 -0.0620983
RPS24 ribosomal protein S24 -0.0614816
SMYD3 SET and MYND domain containing 3 -0.0601235
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0587131
RPL37A ribosomal protein L37a -0.0573199
PTGR1 prostaglandin reductase 1 -0.0572154
STC1 stanniocalcin 1 -0.0567343
RPL36A ribosomal protein L36a -0.0564236
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0556331
RPL12 ribosomal protein L12 -0.0546327
RPL31 ribosomal protein L31 -0.049926
TMX4 thioredoxin-related transmembrane protein 4 -0.04952
RGS2 regulator of G-protein signaling 2 -0.0494483
RPS12 ribosomal protein S12 -0.0486074
HLA-B major histocompatibility complex, class I, B -0.0483939
RPS8 ribosomal protein S8 -0.0469431
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0464018
SOX4 SRY (sex determining region Y)-box 4 -0.0455675
TGFBI transforming growth factor, beta-induced, 68kDa -0.0453842
OSMR oncostatin M receptor -0.045308
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.045015
WARS1 tryptophanyl-tRNA synthetase 1 -0.0440004
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0431663
SLC39A8 solute carrier family 39 (zinc transporter), member 8 -0.0429864
COL4A5 collagen, type IV, alpha 5 -0.0428372
BMERB1 bMERB domain containing 1 -0.0426503
NALF1 NALCN channel auxiliary factor 1 -0.0421439
RPL38 ribosomal protein L38 -0.0419179
RPL35A ribosomal protein L35a -0.0418434
CDH13 cadherin 13 -0.0415985
NRCAM neuronal cell adhesion molecule -0.0415649
RPS27A ribosomal protein S27a -0.0411407
SRGN serglycin -0.0400077
INHBA inhibin, beta A -0.039982
RPL19 ribosomal protein L19 -0.0395896
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0390506
S100A6 S100 calcium binding protein A6 -0.0389287
TENM3 teneurin transmembrane protein 3 -0.0379863
MFF mitochondrial fission factor -0.0379656
ZMYND8 zinc finger, MYND-type containing 8 -0.0371504
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0371035
RPL34 ribosomal protein L34 -0.0370479
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0365253
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0358896
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0356145
RPS27 ribosomal protein S27 -0.035376
RPS19 ribosomal protein S19 -0.0353358
TBXT T-box transcription factor T -0.0349303
RPL9 ribosomal protein L9 -0.0344901
BCAS3 breast carcinoma amplified sequence 3 -0.0343922
RPS3 ribosomal protein S3 -0.0337555
RPS29 ribosomal protein S29 -0.0335771
RPL37 ribosomal protein L37 -0.0335688
RPS21 ribosomal protein S21 -0.0333677
SLC16A6 solute carrier family 16, member 6 -0.0333225
NCKAP5 NCK-associated protein 5 -0.0325206
PALLD palladin, cytoskeletal associated protein -0.0322845
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0322501
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0321293
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0315669
RPS2 ribosomal protein S2 -0.0314716
B2M beta-2-microglobulin -0.031429
FOXC1 forkhead box C1 -0.0311629
RPLP2 ribosomal protein, large, P2 -0.0311249
RPLP0 ribosomal protein, large, P0 -0.029828
TNPO1 transportin 1 -0.0294091
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0293613
RPS13 ribosomal protein S13 -0.0293554
CRLF2 cytokine receptor-like factor 2 -0.0290904
ZBTB38 zinc finger and BTB domain containing 38 -0.0283176
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0283102
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0281565
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0281169
RPS23 ribosomal protein S23 -0.0280182
KIAA0825 KIAA0825 -0.0275667
RPS16 ribosomal protein S16 -0.0272379
GPAT3 glycerol-3-phosphate acyltransferase 3 -0.0268897
SEPTIN10 septin 10 -0.0266913
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 -0.0265743
TMSB4X thymosin beta 4, X-linked -0.0263389
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0260055
GPRIN3 GPRIN family member 3 -0.0259463
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0258745