Regorafenib_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Regorafenib perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Regorafenib_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ZMYND8 zinc finger, MYND-type containing 8 0.068332
NDRG1 N-myc downstream regulated 1 0.0638904
H1-0 H1.0 linker histone 0.054213
STS steroid sulfatase (microsomal), isozyme S 0.0535702
EGLN3 egl-9 family hypoxia-inducible factor 3 0.05117
GRK3 G protein-coupled receptor kinase 3 0.049348
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0474387
RNF149 ring finger protein 149 0.0468546
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0389383
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0380925
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.036101
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0344935
ERBIN erbb2 interacting protein 0.0334903
ALPK1 alpha-kinase 1 0.0329907
RAD51B RAD51 paralog B 0.0315267
MSI2 musashi RNA-binding protein 2 0.0314919
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0306582
ESYT2 extended synaptotagmin-like protein 2 0.0287487
TXNIP thioredoxin interacting protein 0.0283787
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0282993
DYNC2I1 dynein 2 intermediate chain 1 0.0270098
NPEPPS aminopeptidase puromycin sensitive 0.0269761
FTH1 ferritin, heavy polypeptide 1 0.0260141
ATP10B ATPase, class V, type 10B 0.0258937
SAMD4A sterile alpha motif domain containing 4A 0.025846
STYXL2 serine/threonine/tyrosine interacting like 2 0.0247922
ITGA6 integrin, alpha 6 0.0241504
DIAPH3 diaphanous-related formin 3 0.0238856
TRIO trio Rho guanine nucleotide exchange factor 0.0235721
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like 0.022384
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0217464
IGFBP3 insulin-like growth factor binding protein 3 0.0211828
CCNL1 cyclin L1 0.0208672
FOSL2 FOS-like antigen 2 0.0208463
PPARG peroxisome proliferator-activated receptor gamma 0.0207932
SCARB1 scavenger receptor class B, member 1 0.0206457
LPCAT1 lysophosphatidylcholine acyltransferase 1 0.0200653
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0197885
STK39 serine threonine kinase 39 0.0197303
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0196606
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.019605
PFKP phosphofructokinase, platelet 0.0195646
ZNF395 zinc finger protein 395 0.0195056
KIF16B kinesin family member 16B 0.0194456
FNDC3B fibronectin type III domain containing 3B 0.0191246
SORBS1 sorbin and SH3 domain containing 1 0.0186681
CNOT11 CCR4-NOT transcription complex, subunit 11 0.0185735
CD46 CD46 molecule, complement regulatory protein 0.0185371
FAM13A family with sequence similarity 13, member A 0.0184054
VEGFA vascular endothelial growth factor A 0.018403
CSTPP1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 0.0183116
APOL2 apolipoprotein L, 2 0.0182277
EPSTI1 epithelial stromal interaction 1 (breast) 0.0182246
ZFP36L1 ZFP36 ring finger protein-like 1 0.0180334
EFHD2 EF-hand domain family, member D2 0.0174691
ARHGAP26 Rho GTPase activating protein 26 0.0174606
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0172635
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0172215
CLMN calmin (calponin-like, transmembrane) 0.0171599
CORIN corin, serine peptidase 0.0167627
TPCN1 two pore segment channel 1 0.01676
SLC22A23 solute carrier family 22, member 23 0.016646
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0166352
PADI1 peptidyl arginine deiminase, type I 0.0165306
MYO10 myosin X 0.0163764
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0159656
TJP2 tight junction protein 2 0.0159473
SPATA6L spermatogenesis associated 6-like 0.0157607
PTEN phosphatase and tensin homolog 0.0156366
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0153832
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.015268
GMDS GDP-mannose 4,6-dehydratase 0.0151345
SH3PXD2A SH3 and PX domains 2A 0.0150558
PARP8 poly (ADP-ribose) polymerase family, member 8 0.0149624
XDH xanthine dehydrogenase 0.014919
TMPRSS4 transmembrane protease, serine 4 0.0147556
CDK19 cyclin-dependent kinase 19 0.0144336
MAP3K20 mitogen-activated protein kinase kinase kinase 20 0.0144181
FKBP9 FK506 binding protein 9, 63 kDa 0.0144154
ARRDC3 arrestin domain containing 3 0.0143951
MAML2 mastermind-like 2 (Drosophila) 0.0142037
MLPH melanophilin 0.014083
ZNF148 zinc finger protein 148 0.0140406
DLG1 discs, large homolog 1 (Drosophila) 0.013939
TSHZ2 teashirt zinc finger homeobox 2 0.0138558
RFX2 regulatory factor X, 2 (influences HLA class II expression) 0.0138231
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0138143
TMEM165 transmembrane protein 165 0.0137833
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0137747
CLDN4 claudin 4 0.0134789
RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 0.0134206
FGD5 FYVE, RhoGEF and PH domain containing 5 0.0134055
MACC1 metastasis associated in colon cancer 1 0.0133634
MMP24OS MMP24 opposite strand 0.0133059
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0132634
DDIT4 DNA-damage-inducible transcript 4 0.0129531
BCLAF1 BCL2-associated transcription factor 1 0.0129067
HUNK hormonally up-regulated Neu-associated kinase 0.0126485
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0126057
GABRE gamma-aminobutyric acid (GABA) A receptor, epsilon 0.0125746

decreased expression

Symbol Name Standardized Value
TPT1 tumor protein, translationally-controlled 1 -0.191244
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.168915
GCLC glutamate-cysteine ligase, catalytic subunit -0.149565
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.104578
INTS6 integrator complex subunit 6 -0.0982543
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0970113
ANXA2 annexin A2 -0.0943895
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0790653
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0785445
LCN2 lipocalin 2 -0.0726162
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0715089
MAP7 microtubule-associated protein 7 -0.0710338
PHF3 PHD finger protein 3 -0.0709121
FTL ferritin, light polypeptide -0.0696548
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0674
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0664163
SQSTM1 sequestosome 1 -0.0647153
PERP PERP, TP53 apoptosis effector -0.062264
RPS6 ribosomal protein S6 -0.0606093
ACTG1 actin gamma 1 -0.05751
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0564645
RRBP1 ribosome binding protein 1 -0.0557242
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.055705
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0549858
DSCAM Down syndrome cell adhesion molecule -0.0548998
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0543095
VCL vinculin -0.0531678
GOLGB1 golgin B1 -0.0528217
ELOF1 elongation factor 1 homolog (S. cerevisiae) -0.0523338
EIF1 eukaryotic translation initiation factor 1 -0.0506381
PKM pyruvate kinase, muscle -0.050061
RNF213 ring finger protein 213 -0.0493542
EFNB2 ephrin-B2 -0.0485083
B2M beta-2-microglobulin -0.0477147
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0475067
NRIP1 nuclear receptor interacting protein 1 -0.0472307
CANX calnexin -0.046489
RPL12 ribosomal protein L12 -0.0461635
FNDC3A fibronectin type III domain containing 3A -0.0454653
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0451999
PDIA3 protein disulfide isomerase family A, member 3 -0.0449291
EPCAM epithelial cell adhesion molecule -0.044417
TM9SF2 transmembrane 9 superfamily member 2 -0.044243
AHI1 Abelson helper integration site 1 -0.0441366
YAP1 Yes-associated protein 1 -0.0424395
SIPA1L2 signal-induced proliferation-associated 1 like 2 -0.042336
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0421026
TTC3 tetratricopeptide repeat domain 3 -0.0413166
PIBF1 progesterone immunomodulatory binding factor 1 -0.0410426
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0409608
RPL34 ribosomal protein L34 -0.0400001
RBM39 RNA binding motif protein 39 -0.0393965
PLSCR2 phospholipid scramblase 2 -0.0389686
RPL23 ribosomal protein L23 -0.0388135
XAF1 XIAP associated factor 1 -0.0387112
RPL7L1 ribosomal protein L7-like 1 -0.0386319
LIMA1 LIM domain and actin binding 1 -0.0383242
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.0382798
RNF43 ring finger protein 43 -0.0382503
NIPBL Nipped-B homolog (Drosophila) -0.0381647
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0380425
RPL35A ribosomal protein L35a -0.0374394
SFTPA2 surfactant protein A2 -0.0373344
MUC20 mucin 20, cell surface associated -0.0373282
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0372956
RPS8 ribosomal protein S8 -0.0370879
HLA-B major histocompatibility complex, class I, B -0.0370574
TJP1 tight junction protein 1 -0.0369622
HM13 histocompatibility (minor) 13 -0.0368769
SP100 SP100 nuclear antigen -0.0364897
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0355184
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0353195
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0352718
POF1B premature ovarian failure, 1B -0.0347472
MYO1E myosin IE -0.0347175
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0346849
CLTC clathrin, heavy chain (Hc) -0.0346827
SEC31A SEC31 homolog A (S. cerevisiae) -0.0346488
PCCA propionyl CoA carboxylase, alpha polypeptide -0.034523
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.034448
IFNGR1 interferon gamma receptor 1 -0.0343219
UGDH UDP-glucose 6-dehydrogenase -0.0342335
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0341642
IFI6 interferon, alpha-inducible protein 6 -0.0341541
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0339039
RUNX1 runt-related transcription factor 1 -0.0337476
JUN jun proto-oncogene -0.0332584
RPLP0 ribosomal protein, large, P0 -0.0332509
HDLBP high density lipoprotein binding protein -0.0330736
DSTN destrin (actin depolymerizing factor) -0.0328438
MX1 MX dynamin-like GTPase 1 -0.032734
RPL9 ribosomal protein L9 -0.032641
RPL19 ribosomal protein L19 -0.0323706
RPL31 ribosomal protein L31 -0.0322504
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0321158
SERINC5 serine incorporator 5 -0.0313494
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0309983
RAB7A RAB7A, member RAS oncogene family -0.0307995
CSNK1A1 casein kinase 1, alpha 1 -0.0305969
ANKRD11 ankyrin repeat domain 11 -0.0305206