Regorafenib_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Regorafenib perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Regorafenib_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.180436
SDC4 syndecan 4 0.136041
FNDC3B fibronectin type III domain containing 3B 0.102907
FN1 fibronectin 1 0.095907
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0923856
SLC38A2 solute carrier family 38, member 2 0.0909806
FBF1 Fas (TNFRSF6) binding factor 1 0.0908728
TIMP1 TIMP metallopeptidase inhibitor 1 0.0908197
ACSL4 acyl-CoA synthetase long-chain family member 4 0.0900393
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0856807
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0765324
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0753448
NKD1 naked cuticle homolog 1 (Drosophila) 0.0752274
PDGFB platelet-derived growth factor beta polypeptide 0.0709543
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0694434
ELL2 elongation factor, RNA polymerase II, 2 0.0684507
TNS1 tensin 1 0.0670198
SAMD4A sterile alpha motif domain containing 4A 0.063023
MAML2 mastermind-like 2 (Drosophila) 0.0621042
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0612551
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0562887
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0558006
EML4 echinoderm microtubule associated protein like 4 0.0556582
ENO1 enolase 1, (alpha) 0.0550966
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.051226
APOA2 apolipoprotein A-II 0.0504501
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0496716
SRRM1 serine/arginine repetitive matrix 1 0.0470217
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 0.0466397
MTUS1 microtubule associated tumor suppressor 1 0.0453208
LRMDA leucine rich melanocyte differentiation associated 0.044329
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0429937
VEGFA vascular endothelial growth factor A 0.0428371
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0421255
EIF3A eukaryotic translation initiation factor 3, subunit A 0.04149
SRRM2 serine/arginine repetitive matrix 2 0.0403774
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0384409
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0379519
CCL20 chemokine (C-C motif) ligand 20 0.0375473
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.036526
STK17A serine/threonine kinase 17a 0.0364522
HIPK3 homeodomain interacting protein kinase 3 0.0355532
TM4SF1 transmembrane 4 L six family member 1 0.0354783
HLF hepatic leukemia factor 0.0354025
GPAM glycerol-3-phosphate acyltransferase, mitochondrial 0.0342996
SOX5 SRY (sex determining region Y)-box 5 0.0341467
MBNL2 muscleblind-like splicing regulator 2 0.0337774
PEG3 paternally expressed 3 0.0336173
LDHA lactate dehydrogenase A 0.0335756
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0332466
CFB complement factor B 0.0322281
RB1CC1 RB1-inducible coiled-coil 1 0.0317721
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0317496
ZFP36L1 ZFP36 ring finger protein-like 1 0.0315967
OGA O-GlcNAcase 0.0300899
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0297464
H1-0 H1.0 linker histone 0.0293499
OSMR oncostatin M receptor 0.0292207
NACA nascent polypeptide-associated complex alpha subunit 0.029173
DOCK5 dedicator of cytokinesis 5 0.0290589
RPL4 ribosomal protein L4 0.0285037
PHF21A PHD finger protein 21A 0.0282794
TMEM51 transmembrane protein 51 0.0282349
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0276076
HLA-A major histocompatibility complex, class I, A 0.0275125
FUBP1 far upstream element (FUSE) binding protein 1 0.0273985
CRLS1 cardiolipin synthase 1 0.0271712
SLF2 SMC5-SMC6 complex localization factor 2 0.0268677
TOP2A topoisomerase (DNA) II alpha 170kDa 0.026756
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0267006
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0265107
ZSWIM5 zinc finger, SWIM-type containing 5 0.0264297
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) 0.0261097
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) 0.0260298
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.0254564
NDRG1 N-myc downstream regulated 1 0.0254217
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0254127
RNF149 ring finger protein 149 0.0251461
TNRC6A trinucleotide repeat containing 6A 0.0250496
FTH1 ferritin, heavy polypeptide 1 0.0248331
EIF4B eukaryotic translation initiation factor 4B 0.0248178
RPS27A ribosomal protein S27a 0.0248113
AHR aryl hydrocarbon receptor 0.0247275
CLTB clathrin, light chain B 0.0246564
AFDN afadin, adherens junction formation factor 0.0242343
UBC ubiquitin C 0.0242255
LARP1 La ribonucleoprotein domain family, member 1 0.0241894
PHF3 PHD finger protein 3 0.024178
ARFGEF3 ARFGEF family member 3 0.023993
AGO2 argonaute RISC catalytic component 2 0.0239071
RASGRF2 Ras protein-specific guanine nucleotide-releasing factor 2 0.0238709
CENPF centromere protein F, 350/400kDa 0.0237612
PDE8A phosphodiesterase 8A 0.0236469
RBM6 RNA binding motif protein 6 0.0235559
MATN3 matrilin 3 0.0234539
DSCAM Down syndrome cell adhesion molecule 0.0234206
HP1BP3 heterochromatin protein 1, binding protein 3 0.0233477
DENND4A DENN/MADD domain containing 4A 0.0230824
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0229815
AUH AU RNA binding protein/enoyl-CoA hydratase 0.0229681

decreased expression

Symbol Name Standardized Value
ERRFI1 ERBB receptor feedback inhibitor 1 -0.172874
TPT1 tumor protein, translationally-controlled 1 -0.131991
GPC6 glypican 6 -0.128146
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.115806
VCL vinculin -0.0898044
RPL11 ribosomal protein L11 -0.0747539
AKAP12 A kinase (PRKA) anchor protein 12 -0.0720697
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0699512
SOD2 superoxide dismutase 2, mitochondrial -0.0673167
PDLIM5 PDZ and LIM domain 5 -0.0661108
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0653032
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0642366
PCBP2 poly(rC) binding protein 2 -0.0604986
INTS6 integrator complex subunit 6 -0.0596141
ASPH aspartate beta-hydroxylase -0.0594514
EXT1 exostosin glycosyltransferase 1 -0.0588635
RPS2 ribosomal protein S2 -0.0585683
LOC112694756 uncharaterized LOC112694756 -0.0560508
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0550628
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0545914
RPS6 ribosomal protein S6 -0.0541544
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0535985
RPS24 ribosomal protein S24 -0.0531051
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0510675
IGFBP1 insulin-like growth factor binding protein 1 -0.0493385
HPCAL1 hippocalcin-like 1 -0.0483351
RPS8 ribosomal protein S8 -0.0475676
SVIL supervillin -0.0475384
RPLP0 ribosomal protein, large, P0 -0.046291
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0461017
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0449426
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0440443
CLTC clathrin, heavy chain (Hc) -0.0439367
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0423724
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0416463
DTNA dystrobrevin, alpha -0.0409999
CANX calnexin -0.040837
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0405331
RPL35A ribosomal protein L35a -0.0401822
RPL9 ribosomal protein L9 -0.0399643
ICAM1 intercellular adhesion molecule 1 -0.0395933
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 -0.0395536
RIGI RNA sensor RIG-I -0.0391388
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0383087
JAK1 Janus kinase 1 -0.03816
STAT1 signal transducer and activator of transcription 1, 91kDa -0.037737
GMDS GDP-mannose 4,6-dehydratase -0.0375767
FNDC3A fibronectin type III domain containing 3A -0.0374607
RPL38 ribosomal protein L38 -0.0373403
CLIC4 chloride intracellular channel 4 -0.0371727
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0369626
EXOC6B exocyst complex component 6B -0.0368381
LIMS1 LIM and senescent cell antigen-like domains 1 -0.036823
RNF213 ring finger protein 213 -0.0366238
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0363048
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) -0.0359819
HDLBP high density lipoprotein binding protein -0.0356208
ZBTB20 zinc finger and BTB domain containing 20 -0.0350562
NRIP1 nuclear receptor interacting protein 1 -0.0348806
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0348661
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0348063
MCU mitochondrial calcium uniporter -0.0346883
TLE4 transducin-like enhancer of split 4 -0.0343543
TM9SF3 transmembrane 9 superfamily member 3 -0.0341431
RPL12 ribosomal protein L12 -0.0338436
DHRS2 dehydrogenase/reductase (SDR family) member 2 -0.033722
A2M alpha-2-macroglobulin -0.0336862
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0332083
RPL7 ribosomal protein L7 -0.0332006
CP ceruloplasmin (ferroxidase) -0.0325515
DDIT4 DNA-damage-inducible transcript 4 -0.0320664
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0314207
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0312864
GPBP1 GC-rich promoter binding protein 1 -0.0304863
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0303053
TRIP12 thyroid hormone receptor interactor 12 -0.0302127
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0301882
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.030141
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.0300085
KYNU kynureninase -0.0299437
GPHN gephyrin -0.0298414
SERTAD2 SERTA domain containing 2 -0.0297572
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0294268
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.02938
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0293707
KIF21A kinesin family member 21A -0.0292817
DLC1 DLC1 Rho GTPase activating protein -0.029256
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0289864
SH3GLB1 SH3-domain GRB2-like endophilin B1 -0.0288504
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0288275
FAM107B family with sequence similarity 107, member B -0.028772
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.028615
RPLP1 ribosomal protein, large, P1 -0.0284353
MORF4L2 mortality factor 4 like 2 -0.0283834
ZEB1 zinc finger E-box binding homeobox 1 -0.0281362
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0280661
PAWR PRKC, apoptosis, WT1, regulator -0.0279407
FOXO3 forkhead box O3 -0.0274703
RPLP2 ribosomal protein, large, P2 -0.0274698
ATF7IP2 activating transcription factor 7 interacting protein 2 -0.0273899