Regorafenib_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Regorafenib perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Regorafenib_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MUC6 mucin 6, oligomeric mucus/gel-forming 0.25197
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.177018
TNS4 tensin 4 0.128357
MUC5AC mucin 5AC, oligomeric mucus/gel-forming 0.102767
CEMIP cell migration inducing protein, hyaluronan binding 0.0854113
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0806356
H1-0 H1.0 linker histone 0.0806053
KRT8 keratin 8, type II 0.0759213
FAT1 FAT atypical cadherin 1 0.0757642
RNF43 ring finger protein 43 0.0728377
TRIM2 tripartite motif containing 2 0.0672058
ITGA6 integrin, alpha 6 0.0611034
LDHA lactate dehydrogenase A 0.0610803
VMP1 vacuole membrane protein 1 0.0593588
CD47 CD47 molecule 0.0580419
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0571459
ITPRID2 ITPR interacting domain containing 2 0.0565368
TXNIP thioredoxin interacting protein 0.0547344
FTH1 ferritin, heavy polypeptide 1 0.0495183
GMDS GDP-mannose 4,6-dehydratase 0.0482451
GPHN gephyrin 0.0461032
EZR ezrin 0.0446671
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0442096
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0436969
PRRC2C proline-rich coiled-coil 2C 0.0429703
NDRG1 N-myc downstream regulated 1 0.0425692
ANXA11 annexin A11 0.0415491
CD46 CD46 molecule, complement regulatory protein 0.0413189
ZFAND3 zinc finger, AN1-type domain 3 0.0410374
MYH9 myosin, heavy chain 9, non-muscle 0.0410014
ABHD17C abhydrolase domain containing 17C 0.0398653
SETD5 SET domain containing 5 0.0398071
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0396674
ARHGAP26 Rho GTPase activating protein 26 0.0396217
ANKRD11 ankyrin repeat domain 11 0.0387139
ACTN4 actinin, alpha 4 0.0386593
RNF145 ring finger protein 145 0.0383442
GOLGA4 golgin A4 0.0378067
BCL2L1 BCL2-like 1 0.0375262
EIF4B eukaryotic translation initiation factor 4B 0.0370849
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0362425
KRT19 keratin 19, type I 0.0354287
PICALM phosphatidylinositol binding clathrin assembly protein 0.0351755
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.0351563
RBM39 RNA binding motif protein 39 0.0348293
ANXA2 annexin A2 0.0341245
TMED2 transmembrane emp24 domain trafficking protein 2 0.0338685
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0336125
SFPQ splicing factor proline/glutamine-rich 0.0336012
SHB Src homology 2 domain containing adaptor protein B 0.0335413
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 0.0332855
SPRED1 sprouty-related, EVH1 domain containing 1 0.0331901
RPL3 ribosomal protein L3 0.0329457
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 0.0326719
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0324589
KRT18 keratin 18, type I 0.0323962
MPRIP myosin phosphatase Rho interacting protein 0.031466
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0313843
OGA O-GlcNAcase 0.0312431
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0310472
PTK2 protein tyrosine kinase 2 0.0310036
TRIO trio Rho guanine nucleotide exchange factor 0.0308792
UBA6 ubiquitin-like modifier activating enzyme 6 0.0306425
EPHA2 EPH receptor A2 0.0303912
CTBP2 C-terminal binding protein 2 0.0302908
PNN pinin, desmosome associated protein 0.0295743
YAP1 Yes-associated protein 1 0.0293741
PTEN phosphatase and tensin homolog 0.0292458
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0286186
ARHGAP21 Rho GTPase activating protein 21 0.0286137
CTNND1 catenin (cadherin-associated protein), delta 1 0.0285273
FOXJ3 forkhead box J3 0.0284977
ZNF292 zinc finger protein 292 0.0283881
SPRED2 sprouty-related, EVH1 domain containing 2 0.028111
PNISR PNN-interacting serine/arginine-rich protein 0.0280338
MACF1 microtubule-actin crosslinking factor 1 0.0279645
SREBF2 sterol regulatory element binding transcription factor 2 0.0268762
VASP vasodilator-stimulated phosphoprotein 0.0268613
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0267844
CCNL1 cyclin L1 0.0267533
EMP1 epithelial membrane protein 1 0.0266353
NUP58 nucleoporin 58 0.0265828
GIGYF2 GRB10 interacting GYF protein 2 0.0264421
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0260244
CHD1 chromodomain helicase DNA binding protein 1 0.0259853
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0259192
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0256701
ZFP36L1 ZFP36 ring finger protein-like 1 0.0256525
AKAP13 A kinase (PRKA) anchor protein 13 0.0255439
CENPF centromere protein F, 350/400kDa 0.0253967
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.0253952
COG5 component of oligomeric golgi complex 5 0.0253655
UBE2H ubiquitin-conjugating enzyme E2H 0.0253124
PRSS3 protease, serine, 3 0.0246268
TM9SF2 transmembrane 9 superfamily member 2 0.0245899
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.024468
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0243631
CDH17 cadherin 17, LI cadherin (liver-intestine) 0.0243526
TBC1D5 TBC1 domain family, member 5 0.0240454
GSK3B glycogen synthase kinase 3 beta 0.0237479

decreased expression

Symbol Name Standardized Value
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.256018
TPT1 tumor protein, translationally-controlled 1 -0.135851
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.126856
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.12206
NPSR1 neuropeptide S receptor 1 -0.118159
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.110461
RPS6 ribosomal protein S6 -0.0780334
CANX calnexin -0.0764745
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0751799
AHNAK AHNAK nucleoprotein -0.0669036
RPLP1 ribosomal protein, large, P1 -0.061637
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0590312
LOC112694756 uncharaterized LOC112694756 -0.05582
MYO1E myosin IE -0.0524056
RPL35A ribosomal protein L35a -0.048993
RPS12 ribosomal protein S12 -0.047779
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0454235
RPS8 ribosomal protein S8 -0.0453827
KLF5 Kruppel-like factor 5 (intestinal) -0.045246
SOX4 SRY (sex determining region Y)-box 4 -0.0446503
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0424892
TPM4 tropomyosin 4 -0.041657
TMSB10 thymosin beta 10 -0.0405766
SLC35F3 solute carrier family 35, member F3 -0.0393766
PTPRK protein tyrosine phosphatase, receptor type, K -0.0379436
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0377329
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0377233
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.037219
RPL13A ribosomal protein L13a -0.0366935
PCBP2 poly(rC) binding protein 2 -0.036343
AGR2 anterior gradient 2 -0.0357233
GCC2 GRIP and coiled-coil domain containing 2 -0.03482
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.034352
FHIT fragile histidine triad -0.0343014
RPS25 ribosomal protein S25 -0.0335074
RPL12 ribosomal protein L12 -0.0333313
PDE4D phosphodiesterase 4D, cAMP-specific -0.0329765
RPL34 ribosomal protein L34 -0.03279
RPL30 ribosomal protein L30 -0.0326794
BACE2 beta-site APP-cleaving enzyme 2 -0.0324025
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0321546
RPS2 ribosomal protein S2 -0.0314928
S100A6 S100 calcium binding protein A6 -0.0314249
ZBTB20 zinc finger and BTB domain containing 20 -0.0312281
PGK1 phosphoglycerate kinase 1 -0.0312123
VDAC1 voltage-dependent anion channel 1 -0.0311948
AHI1 Abelson helper integration site 1 -0.0311877
KPNB1 karyopherin (importin) beta 1 -0.0310846
ALCAM activated leukocyte cell adhesion molecule -0.0309939
GRB10 growth factor receptor-bound protein 10 -0.0307256
RIGI RNA sensor RIG-I -0.0305728
IER3 immediate early response 3 -0.0304112
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0299287
BTG1 B-cell translocation gene 1, anti-proliferative -0.029853
EPCAM epithelial cell adhesion molecule -0.0298319
RPL7A ribosomal protein L7a -0.0292181
RNF217 ring finger protein 217 -0.0289256
CALR calreticulin -0.0288636
LPP LIM domain containing preferred translocation partner in lipoma -0.0285641
CCND1 cyclin D1 -0.028353
NALF1 NALCN channel auxiliary factor 1 -0.0282733
XPOT exportin, tRNA -0.0277179
RPL37 ribosomal protein L37 -0.0276641
TMSB4X thymosin beta 4, X-linked -0.0275093
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0274198
RPS13 ribosomal protein S13 -0.0272685
ANTXR2 anthrax toxin receptor 2 -0.0266074
PTPRB protein tyrosine phosphatase, receptor type, B -0.0265165
ZNF33A zinc finger protein 33A -0.0260868
GNAS GNAS complex locus -0.0258912
HDLBP high density lipoprotein binding protein -0.0258732
AEBP2 AE binding protein 2 -0.0251649
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0250552
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 -0.0249948
F3 coagulation factor III (thromboplastin, tissue factor) -0.0249761
EEF2 eukaryotic translation elongation factor 2 -0.0246622
FTL ferritin, light polypeptide -0.0244661
RTN3 reticulon 3 -0.0240426
HDAC2 histone deacetylase 2 -0.0239129
RPS27A ribosomal protein S27a -0.0235533
CCSER1 coiled-coil serine-rich protein 1 -0.0232669
DDIT4 DNA-damage-inducible transcript 4 -0.0230507
MLEC malectin -0.0227888
PALLD palladin, cytoskeletal associated protein -0.0226437
RPL36 ribosomal protein L36 -0.022539
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0223002
FBXO11 F-box protein 11 -0.0221298
PCDH9 protocadherin 9 -0.0220769
DIAPH2 diaphanous-related formin 2 -0.02205
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0219325
APP amyloid beta (A4) precursor protein -0.0218402
UBC ubiquitin C -0.0215004
RPS27 ribosomal protein S27 -0.0212599
FHL2 four and a half LIM domains 2 -0.0211696
PTPRF protein tyrosine phosphatase, receptor type, F -0.0209442
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0209038
EGFR epidermal growth factor receptor -0.0208981
TSC22D1 TSC22 domain family, member 1 -0.0207021
RPLP0 ribosomal protein, large, P0 -0.0206375
RPS16 ribosomal protein S16 -0.0205766