Regorafenib_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Regorafenib perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Regorafenib_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.118759
FAM13A family with sequence similarity 13, member A 0.105449
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0924924
THSD4 thrombospondin, type I, domain containing 4 0.0861372
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) 0.0822769
UBC ubiquitin C 0.0812495
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0732257
NDRG1 N-myc downstream regulated 1 0.0731674
NAMPT nicotinamide phosphoribosyltransferase 0.0694501
LRP1B low density lipoprotein receptor-related protein 1B 0.0686386
H1-0 H1.0 linker histone 0.0667201
PTPRM protein tyrosine phosphatase, receptor type, M 0.0664277
PDE4D phosphodiesterase 4D, cAMP-specific 0.0661988
FNDC3B fibronectin type III domain containing 3B 0.0591236
GRAMD1B GRAM domain containing 1B 0.0580515
TMSB10 thymosin beta 10 0.0575922
STC1 stanniocalcin 1 0.0551086
CEMIP cell migration inducing protein, hyaluronan binding 0.0541432
SEC61G Sec61 gamma subunit 0.0527795
ZMYND8 zinc finger, MYND-type containing 8 0.052051
KMT2E lysine (K)-specific methyltransferase 2E 0.0498616
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0470275
BAIAP2L1 BAI1-associated protein 2-like 1 0.0451516
TMEM165 transmembrane protein 165 0.0424127
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.04163
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0411854
PKM pyruvate kinase, muscle 0.0390952
IGFBP3 insulin-like growth factor binding protein 3 0.0389639
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0386406
RPL4 ribosomal protein L4 0.0382689
MT2A metallothionein 2A 0.0380899
PTPRJ protein tyrosine phosphatase, receptor type, J 0.037809
BIRC3 baculoviral IAP repeat containing 3 0.0370925
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.037087
RNF145 ring finger protein 145 0.0359542
KDM6A lysine (K)-specific demethylase 6A 0.0352816
SMAD3 SMAD family member 3 0.0347872
CST3 cystatin C 0.0343326
GRB10 growth factor receptor-bound protein 10 0.0338785
CDCP1 CUB domain containing protein 1 0.032906
ANKRD12 ankyrin repeat domain 12 0.0324901
AREG amphiregulin 0.0323466
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0322872
CES1 carboxylesterase 1 0.0322825
SDC4 syndecan 4 0.030792
SLC38A1 solute carrier family 38, member 1 0.0303477
UBA6 ubiquitin-like modifier activating enzyme 6 0.0296678
CPE carboxypeptidase E 0.0294827
SLMAP sarcolemma associated protein 0.0294666
KANSL1 KAT8 regulatory NSL complex subunit 1 0.0290444
KCMF1 potassium channel modulatory factor 1 0.0290336
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa 0.028686
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0284533
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0279381
GCLC glutamate-cysteine ligase, catalytic subunit 0.0278805
MSN moesin 0.0276114
PDE8A phosphodiesterase 8A 0.0274291
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.027003
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0265309
AKAP12 A kinase (PRKA) anchor protein 12 0.0263177
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0254403
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0251921
TPD52 tumor protein D52 0.0249694
SOD2 superoxide dismutase 2, mitochondrial 0.024921
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0248948
RICTOR RPTOR independent companion of MTOR, complex 2 0.0246411
CTSL cathepsin L 0.0245128
NGLY1 N-glycanase 1 0.0244616
AKR1C1 aldo-keto reductase family 1, member C1 0.0242356
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0240041
CD163L1 CD163 molecule-like 1 0.0238976
USP34 ubiquitin specific peptidase 34 0.0231541
HOOK2 hook microtubule-tethering protein 2 0.023037
CXCL8 chemokine (C-X-C motif) ligand 8 0.0228789
RNF149 ring finger protein 149 0.0227326
TMEM45B transmembrane protein 45B 0.022695
MGST1 microsomal glutathione S-transferase 1 0.0223987
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0222637
ZNF292 zinc finger protein 292 0.02218
RREB1 ras responsive element binding protein 1 0.0221038
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.0220175
WAC WW domain containing adaptor with coiled-coil 0.0219523
BTG1 B-cell translocation gene 1, anti-proliferative 0.0217883
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0216358
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0216045
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0215925
MACF1 microtubule-actin crosslinking factor 1 0.0215321
EFNA5 ephrin-A5 0.0214389
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0214283
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0213347
ESYT2 extended synaptotagmin-like protein 2 0.0213055
ATG7 autophagy related 7 0.0210753
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0209863
PTMA prothymosin, alpha 0.0206184
RNF24 ring finger protein 24 0.020444
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0201381
RAP1B RAP1B, member of RAS oncogene family 0.020009
ADAM17 ADAM metallopeptidase domain 17 0.0199558
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0192802
S100A9 S100 calcium binding protein A9 0.0192302

decreased expression

Symbol Name Standardized Value
EGFR epidermal growth factor receptor -0.242949
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.21224
HDLBP high density lipoprotein binding protein -0.0726283
TES testin LIM domain protein -0.0720463
TXNRD1 thioredoxin reductase 1 -0.071304
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0643631
TPT1 tumor protein, translationally-controlled 1 -0.0586474
ANXA2 annexin A2 -0.0578938
PCBP2 poly(rC) binding protein 2 -0.0568982
MYOF myoferlin -0.0552232
RPS3 ribosomal protein S3 -0.0544511
EEF2 eukaryotic translation elongation factor 2 -0.0527057
LOC112694756 uncharaterized LOC112694756 -0.0514371
CANX calnexin -0.0484323
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 -0.0481634
LDHA lactate dehydrogenase A -0.0447669
VCL vinculin -0.0440896
AKAP9 A kinase (PRKA) anchor protein 9 -0.0423123
ASPH aspartate beta-hydroxylase -0.0420081
GOLGB1 golgin B1 -0.0418424
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0416502
EXT1 exostosin glycosyltransferase 1 -0.041438
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0372674
HYOU1 hypoxia up-regulated 1 -0.0357138
ZC3H11A zinc finger CCCH-type containing 11A -0.035264
MORF4L2 mortality factor 4 like 2 -0.035208
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0348671
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0325699
JAK1 Janus kinase 1 -0.0308994
BLZF1 basic leucine zipper nuclear factor 1 -0.0294975
RPL35A ribosomal protein L35a -0.0294901
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0284096
NABP1 nucleic acid binding protein 1 -0.0283535
TTC3 tetratricopeptide repeat domain 3 -0.0279982
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0274379
PLEC plectin -0.0273057
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0269895
SPDYA speedy/RINGO cell cycle regulator family member A -0.0268143
ZBTB20 zinc finger and BTB domain containing 20 -0.0266041
SEC31A SEC31 homolog A (S. cerevisiae) -0.0265099
RPS12 ribosomal protein S12 -0.0255422
SMYD3 SET and MYND domain containing 3 -0.0254464
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0253321
MGAT4C MGAT4 family, member C -0.0251332
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0251323
MKI67 marker of proliferation Ki-67 -0.0250373
UGDH UDP-glucose 6-dehydrogenase -0.024797
RPL8 ribosomal protein L8 -0.0245296
CEP350 centrosomal protein 350kDa -0.0243818
RPL11 ribosomal protein L11 -0.0243276
RPLP0 ribosomal protein, large, P0 -0.0242754
RPL7 ribosomal protein L7 -0.0242344
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0241725
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0241509
LRP12 low density lipoprotein receptor-related protein 12 -0.0237038
CAPN2 calpain 2, (m/II) large subunit -0.0236206
TMCO3 transmembrane and coiled-coil domains 3 -0.0233024
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0231071
ARCN1 archain 1 -0.0227079
MCTP1 multiple C2 domains, transmembrane 1 -0.0224595
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0223042
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0221389
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0219466
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0217988
RPL31 ribosomal protein L31 -0.0215814
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0215295
RACK1 receptor for activated C kinase 1 -0.0213895
DSPP dentin sialophosphoprotein -0.0213344
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0212976
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0210925
BZW1 basic leucine zipper and W2 domains 1 -0.0210717
TAS2R14 taste receptor, type 2, member 14 -0.0209799
CAV1 caveolin 1, caveolae protein, 22kDa -0.0208447
ANKRD17 ankyrin repeat domain 17 -0.0207663
GM2A GM2 ganglioside activator -0.020721
MLEC malectin -0.0205642
INTS6 integrator complex subunit 6 -0.0205509
ST14 suppression of tumorigenicity 14 (colon carcinoma) -0.0204999
LMAN1 lectin, mannose-binding, 1 -0.0204628
RPL12 ribosomal protein L12 -0.0202905
JMJD1C jumonji domain containing 1C -0.0201612
SEPTIN2 septin 2 -0.0201392
TBC1D22A TBC1 domain family, member 22A -0.0200861
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.019987
LTN1 listerin E3 ubiquitin protein ligase 1 -0.0199566
ARGLU1 arginine and glutamate rich 1 -0.0198302
NSUN6 NOP2/Sun domain family, member 6 -0.0198257
SLTM SAFB-like, transcription modulator -0.0198241
DSCAM Down syndrome cell adhesion molecule -0.0198173
KIAA1328 KIAA1328 -0.0193311
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 -0.0190513
PDIA3 protein disulfide isomerase family A, member 3 -0.0189087
KIAA0232 KIAA0232 -0.0187816
PRELID2 PRELI domain containing 2 -0.0185539
MYO9A myosin IXA -0.0185137
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0184539
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0184417
REL v-rel avian reticuloendotheliosis viral oncogene homolog -0.0183472
NIPBL Nipped-B homolog (Drosophila) -0.0182505
ARHGAP5 Rho GTPase activating protein 5 -0.0179898