Regorafenib_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Regorafenib perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Regorafenib_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.20584
TFPI2 tissue factor pathway inhibitor 2 0.115987
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.110494
TXNRD1 thioredoxin reductase 1 0.10396
IGF2 insulin-like growth factor 2 0.0989545
GRAMD1B GRAM domain containing 1B 0.0874646
SLC38A2 solute carrier family 38, member 2 0.079195
FGB fibrinogen beta chain 0.0625817
CCNL1 cyclin L1 0.0625535
WDR43 WD repeat domain 43 0.0574148
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0538535
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0513195
PTK2 protein tyrosine kinase 2 0.0507921
YBX3 Y box binding protein 3 0.0494167
LDHA lactate dehydrogenase A 0.0485032
PTMA prothymosin, alpha 0.0483372
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0440705
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0418432
HDAC9 histone deacetylase 9 0.0416914
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0416861
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0415783
THSD4 thrombospondin, type I, domain containing 4 0.0410331
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0405051
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0404698
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0403785
BCLAF1 BCL2-associated transcription factor 1 0.0395386
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0392839
STC1 stanniocalcin 1 0.0388469
KDM3A lysine (K)-specific demethylase 3A 0.038602
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0382671
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.037183
UTRN utrophin 0.036994
TTC28 tetratricopeptide repeat domain 28 0.0361326
TPD52 tumor protein D52 0.0358408
NQO1 NAD(P)H dehydrogenase, quinone 1 0.03527
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0348966
USP3 ubiquitin specific peptidase 3 0.034754
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0346377
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0346299
PAWR PRKC, apoptosis, WT1, regulator 0.0340928
ERRFI1 ERBB receptor feedback inhibitor 1 0.0339438
ACACA acetyl-CoA carboxylase alpha 0.0337353
RASAL2 RAS protein activator like 2 0.0334866
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0332704
ACTG1 actin gamma 1 0.0319306
KLF6 Kruppel-like factor 6 0.0318119
PDIA6 protein disulfide isomerase family A, member 6 0.0311431
NUP58 nucleoporin 58 0.0309301
CYRIB CYFIP related Rac1 interactor B 0.0307388
BIRC2 baculoviral IAP repeat containing 2 0.0305517
YME1L1 YME1-like 1 ATPase 0.0303156
FLNB filamin B, beta 0.0303125
ANXA1 annexin A1 0.029636
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0292598
BASP1 brain abundant, membrane attached signal protein 1 0.0287979
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0283554
NOLC1 nucleolar and coiled-body phosphoprotein 1 0.0281392
UBAP2L ubiquitin associated protein 2-like 0.0281318
NOL10 nucleolar protein 10 0.0280781
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0280669
MACF1 microtubule-actin crosslinking factor 1 0.027963
ENO1 enolase 1, (alpha) 0.027397
ZBTB20 zinc finger and BTB domain containing 20 0.027064
RNF145 ring finger protein 145 0.0265027
DST dystonin 0.0264153
RPL4 ribosomal protein L4 0.0263948
MIER1 mesoderm induction early response 1, transcriptional regulator 0.026177
WBP11 WW domain binding protein 11 0.0256902
THBS1 thrombospondin 1 0.0256003
ERBIN erbb2 interacting protein 0.0255953
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.025405
RBM25 RNA binding motif protein 25 0.0253389
SRRM2 serine/arginine repetitive matrix 2 0.0251544
MCL1 myeloid cell leukemia 1 0.0251441
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0250379
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0245727
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0244801
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 0.0244586
VMP1 vacuole membrane protein 1 0.0244168
ANLN anillin, actin binding protein 0.0243445
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0241588
TBC1D5 TBC1 domain family, member 5 0.0240769
CHN1 chimerin 1 0.0240637
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0238903
SLC35F3 solute carrier family 35, member F3 0.0238824
RBM8A RNA binding motif protein 8A 0.0237629
BZW1 basic leucine zipper and W2 domains 1 0.0236811
BICC1 BicC family RNA binding protein 1 0.0234077
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0232157
MAML3 mastermind-like 3 (Drosophila) 0.0231641
MKI67 marker of proliferation Ki-67 0.0229681
EIF4A2 eukaryotic translation initiation factor 4A2 0.0229157
SOX4 SRY (sex determining region Y)-box 4 0.0228969
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0227968
SRRM1 serine/arginine repetitive matrix 1 0.0227494
CASC3 cancer susceptibility candidate 3 0.0224723
TRA2B transformer 2 beta homolog (Drosophila) 0.0222335
PUM1 pumilio RNA-binding family member 1 0.0220682
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0219105
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0218787

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.217341
TMSB10 thymosin beta 10 -0.148612
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0782508
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0747216
EIF1 eukaryotic translation initiation factor 1 -0.0726246
RPLP1 ribosomal protein, large, P1 -0.0689515
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0625848
FTH1 ferritin, heavy polypeptide 1 -0.0567956
VIM vimentin -0.0561744
TPT1 tumor protein, translationally-controlled 1 -0.0550884
RPL35A ribosomal protein L35a -0.0464613
RPS12 ribosomal protein S12 -0.045735
PCBP2 poly(rC) binding protein 2 -0.0444239
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0440932
ELL2 elongation factor, RNA polymerase II, 2 -0.0420178
RPL37 ribosomal protein L37 -0.0405513
RPS20 ribosomal protein S20 -0.0397997
VCL vinculin -0.0392738
RPL30 ribosomal protein L30 -0.0390486
FTL ferritin, light polypeptide -0.0380288
RPL31 ribosomal protein L31 -0.0359655
RPS8 ribosomal protein S8 -0.0352828
SLC38A1 solute carrier family 38, member 1 -0.0352284
RPL23 ribosomal protein L23 -0.0348839
SMOC1 SPARC related modular calcium binding 1 -0.0338254
RPL37A ribosomal protein L37a -0.0336801
LOC112694756 uncharaterized LOC112694756 -0.0335107
RPL28 ribosomal protein L28 -0.0332698
SPRED2 sprouty-related, EVH1 domain containing 2 -0.033133
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0328536
MORF4L2 mortality factor 4 like 2 -0.032786
SOD2 superoxide dismutase 2, mitochondrial -0.0323858
COTL1 coactosin-like F-actin binding protein 1 -0.0322833
RPS17 ribosomal protein S17 -0.0321597
TPM3 tropomyosin 3 -0.0319645
MYOF myoferlin -0.0316577
RPL36 ribosomal protein L36 -0.0312316
ZFAND3 zinc finger, AN1-type domain 3 -0.0308837
HLA-A major histocompatibility complex, class I, A -0.0300923
HIBADH 3-hydroxyisobutyrate dehydrogenase -0.0291571
WAC WW domain containing adaptor with coiled-coil -0.0290904
CUL3 cullin 3 -0.0285538
FNDC3B fibronectin type III domain containing 3B -0.0284082
CSNK1A1 casein kinase 1, alpha 1 -0.0283825
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0283246
SAMD4A sterile alpha motif domain containing 4A -0.0282869
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0282531
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0280999
ACTN1 actinin, alpha 1 -0.0279332
RPS24 ribosomal protein S24 -0.0277564
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0277245
PCNX4 pecanex 4 -0.0276779
RPL13A ribosomal protein L13a -0.0274911
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0273852
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0273807
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0271057
HLA-B major histocompatibility complex, class I, B -0.0266737
HM13 histocompatibility (minor) 13 -0.0259612
RPS19 ribosomal protein S19 -0.0255124
RPL11 ribosomal protein L11 -0.0254673
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0253063
RPL26 ribosomal protein L26 -0.0251899
RAB7A RAB7A, member RAS oncogene family -0.0251663
ZEB1 zinc finger E-box binding homeobox 1 -0.0246922
ALCAM activated leukocyte cell adhesion molecule -0.0245921
RPL34 ribosomal protein L34 -0.0243599
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0242141
ATF4 activating transcription factor 4 -0.0241813
RPL9 ribosomal protein L9 -0.0241496
SLC39A14 solute carrier family 39 (zinc transporter), member 14 -0.0240542
RUNX1 runt-related transcription factor 1 -0.0240491
RPS21 ribosomal protein S21 -0.0236828
MT1X metallothionein 1X -0.023511
RB1CC1 RB1-inducible coiled-coil 1 -0.023426
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0232703
CDK13 cyclin-dependent kinase 13 -0.0231538
TSC22D2 TSC22 domain family, member 2 -0.0231467
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0231343
EEF2 eukaryotic translation elongation factor 2 -0.0227702
FBXO11 F-box protein 11 -0.0223842
JMJD1C jumonji domain containing 1C -0.0223259
RPS27 ribosomal protein S27 -0.0221967
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.02195
COX4I1 cytochrome c oxidase subunit IV isoform 1 -0.0218683
NT5C2 5'-nucleotidase, cytosolic II -0.0215549
RAB22A RAB22A, member RAS oncogene family -0.0214767
RPS16 ribosomal protein S16 -0.0214609
PPIA peptidylprolyl isomerase A (cyclophilin A) -0.0214288
NNMT nicotinamide N-methyltransferase -0.0214169
FLNA filamin A, alpha -0.0213924
SENP6 SUMO1/sentrin specific peptidase 6 -0.0213072
ATP5F1E ATP synthase F1 subunit epsilon -0.0208062
RPL36A ribosomal protein L36a -0.0208018
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0206105
AKAP9 A kinase (PRKA) anchor protein 9 -0.0206104
S100A10 S100 calcium binding protein A10 -0.020605
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0204459
PDLIM5 PDZ and LIM domain 5 -0.0203913
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -0.0203739
NIPBL Nipped-B homolog (Drosophila) -0.0203693