Regorafenib_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Regorafenib perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Regorafenib_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.128893
COL11A1 collagen, type XI, alpha 1 0.0959651
ZFAND3 zinc finger, AN1-type domain 3 0.0883086
TRIO trio Rho guanine nucleotide exchange factor 0.084825
KDM3A lysine (K)-specific demethylase 3A 0.0846777
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0660676
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0650484
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0637382
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0586429
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.056725
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.05563
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0542192
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0526921
COL3A1 collagen, type III, alpha 1 0.0524006
PTMA prothymosin, alpha 0.051303
NIPBL Nipped-B homolog (Drosophila) 0.0511267
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0510976
FIP1L1 factor interacting with PAPOLA and CPSF1 0.0487302
NUP58 nucleoporin 58 0.0486354
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0482915
ANKRD11 ankyrin repeat domain 11 0.0481413
MKI67 marker of proliferation Ki-67 0.0476283
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0461113
WDR43 WD repeat domain 43 0.0433018
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0431776
ITGAV integrin, alpha V 0.0428167
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0420197
ANXA1 annexin A1 0.0417024
FOXG1 forkhead box G1 0.0416053
FMNL2 formin-like 2 0.0415363
ILF3 interleukin enhancer binding factor 3, 90kDa 0.0410649
UBA6 ubiquitin-like modifier activating enzyme 6 0.039947
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0381889
SPAG9 sperm associated antigen 9 0.0381635
H1-4 H1.4 linker histone, cluster member 0.0375903
SARNP SAP domain containing ribonucleoprotein 0.0372172
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0371603
PUM1 pumilio RNA-binding family member 1 0.0369559
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0367498
OSBPL9 oxysterol binding protein-like 9 0.0365312
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0364622
COPA coatomer protein complex, subunit alpha 0.0363683
H2AZ2 H2A.Z variant histone 2 0.0362781
DST dystonin 0.0361787
FUBP1 far upstream element (FUSE) binding protein 1 0.0359006
PARD3B par-3 family cell polarity regulator beta 0.0357348
AKAP12 A kinase (PRKA) anchor protein 12 0.0354359
PGAP1 post-GPI attachment to proteins 1 0.0349784
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0347639
RYBP RING1 and YY1 binding protein 0.0345786
ZNF292 zinc finger protein 292 0.0344182
RIMS2 regulating synaptic membrane exocytosis 2 0.0343942
MB21D2 Mab-21 domain containing 2 0.0339478
QKI QKI, KH domain containing, RNA binding 0.0337411
RPL21 ribosomal protein L21 0.033741
CLU clusterin 0.0336252
EEF1G eukaryotic translation elongation factor 1 gamma 0.0330973
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0329651
SP3 Sp3 transcription factor 0.0322994
COL5A2 collagen, type V, alpha 2 0.0321756
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0321574
THOC2 THO complex 2 0.032062
RO60 Ro60, Y RNA binding protein 0.0319501
USP9X ubiquitin specific peptidase 9, X-linked 0.0319309
SCAF4 SR-related CTD-associated factor 4 0.0319108
MYBL1 v-myb avian myeloblastosis viral oncogene homolog-like 1 0.0318686
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0316695
FNDC3B fibronectin type III domain containing 3B 0.03097
LDHA lactate dehydrogenase A 0.0308447
STRN3 striatin, calmodulin binding protein 3 0.0308264
SFPQ splicing factor proline/glutamine-rich 0.0307303
EIF4B eukaryotic translation initiation factor 4B 0.0306575
RBM33 RNA binding motif protein 33 0.0305876
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0305837
PNN pinin, desmosome associated protein 0.0304357
RSL1D1 ribosomal L1 domain containing 1 0.030118
OSBPL10 oxysterol binding protein-like 10 0.0300716
XPO4 exportin 4 0.0298916
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0296598
ZNF451 zinc finger protein 451 0.0296349
EMP1 epithelial membrane protein 1 0.0294327
EIF3E eukaryotic translation initiation factor 3, subunit E 0.029354
CYTH3 cytohesin 3 0.0293331
MCM3 minichromosome maintenance complex component 3 0.0290636
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0289868
FYTTD1 forty-two-three domain containing 1 0.0287681
RBM39 RNA binding motif protein 39 0.0286962
THBS1 thrombospondin 1 0.028684
KMT2E lysine (K)-specific methyltransferase 2E 0.0284692
EPB41L3 erythrocyte membrane protein band 4.1-like 3 0.0284048
PGPEP1L pyroglutamyl-peptidase I-like 0.0283477
HBS1L HBS1-like translational GTPase 0.0283057
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0282724
TAF1 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa 0.0282149
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0282001
USP53 ubiquitin specific peptidase 53 0.0281464
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.0281426
CCDC88A coiled-coil domain containing 88A 0.0279764
DSCAM Down syndrome cell adhesion molecule 0.0277569
MDN1 MDN1, midasin homolog (yeast) 0.027711

decreased expression

Symbol Name Standardized Value
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.141812
FOXP2 forkhead box P2 -0.0821174
VIM vimentin -0.0813071
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0810019
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0714189
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.068908
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0625281
RPS6 ribosomal protein S6 -0.0615732
CADM2 cell adhesion molecule 2 -0.0615424
PCLO piccolo presynaptic cytomatrix protein -0.0586136
FN1 fibronectin 1 -0.0583615
SYT1 synaptotagmin I -0.0575223
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0559729
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0558675
FTL ferritin, light polypeptide -0.0547775
TXNRD1 thioredoxin reductase 1 -0.0542839
TENM3 teneurin transmembrane protein 3 -0.0533099
ACTG1 actin gamma 1 -0.0510121
RPL35A ribosomal protein L35a -0.0504212
ENO1 enolase 1, (alpha) -0.0502065
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.050071
PDE4D phosphodiesterase 4D, cAMP-specific -0.0500021
TPT1 tumor protein, translationally-controlled 1 -0.049662
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0496514
TPX2 TPX2, microtubule-associated -0.0490854
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0470003
POTEF POTE ankyrin domain family, member F -0.0468044
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0448128
KPNB1 karyopherin (importin) beta 1 -0.0441666
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0422975
BBX bobby sox homolog (Drosophila) -0.0422146
RPS16 ribosomal protein S16 -0.0421932
ARID4B AT rich interactive domain 4B (RBP1-like) -0.041071
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0409175
TMSB10 thymosin beta 10 -0.0408692
AHNAK AHNAK nucleoprotein -0.0398132
ARHGAP24 Rho GTPase activating protein 24 -0.0395144
ECT2 epithelial cell transforming 2 -0.038879
ADNP activity-dependent neuroprotector homeobox -0.0387887
BPTF bromodomain PHD finger transcription factor -0.0386312
COTL1 coactosin-like F-actin binding protein 1 -0.0380543
RPL23 ribosomal protein L23 -0.0378962
RPLP1 ribosomal protein, large, P1 -0.0373795
PGK1 phosphoglycerate kinase 1 -0.0373669
MRPS6 mitochondrial ribosomal protein S6 -0.0369853
RTN4 reticulon 4 -0.036708
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0362087
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.0360143
GRB2 growth factor receptor-bound protein 2 -0.0360041
SOX5 SRY (sex determining region Y)-box 5 -0.0356992
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0355355
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.035094
ZBTB20 zinc finger and BTB domain containing 20 -0.0350027
RSF1 remodeling and spacing factor 1 -0.0349751
WSB1 WD repeat and SOCS box containing 1 -0.034851
ANKRD12 ankyrin repeat domain 12 -0.0347098
FAM177A1 family with sequence similarity 177, member A1 -0.0344205
SNX6 sorting nexin 6 -0.0339818
EIF3H eukaryotic translation initiation factor 3, subunit H -0.033439
TUBA1B tubulin, alpha 1b -0.033402
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0331374
MBD5 methyl-CpG binding domain protein 5 -0.0330416
FIGN fidgetin -0.0327912
RACK1 receptor for activated C kinase 1 -0.0322237
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0321873
RPS19 ribosomal protein S19 -0.0320929
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.031988
MRPS30 mitochondrial ribosomal protein S30 -0.0319647
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0318614
MAP1B microtubule-associated protein 1B -0.0317979
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0317555
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.031755
PPP4R2 protein phosphatase 4, regulatory subunit 2 -0.0311442
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 -0.0310009
TCF12 transcription factor 12 -0.0308151
RAB7A RAB7A, member RAS oncogene family -0.0307177
USP1 ubiquitin specific peptidase 1 -0.0303757
ARHGAP12 Rho GTPase activating protein 12 -0.0302481
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0301041
RBBP4 retinoblastoma binding protein 4 -0.0300292
AK1 adenylate kinase 1 -0.0298297
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0296602
WDR45B WD repeat domain 45B -0.0296574
HMGA1 high mobility group AT-hook 1 -0.0294807
SIK2 salt-inducible kinase 2 -0.0294655
TSC22D1 TSC22 domain family, member 1 -0.0292812
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0291592
GPC3 glypican 3 -0.0290452
SKIC3 SKI3 subunit of superkiller complex -0.0285959
LATS2 large tumor suppressor kinase 2 -0.0285733
RPL30 ribosomal protein L30 -0.0285561
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.0284126
ZNF644 zinc finger protein 644 -0.0284045
LOC102724023 ES1 protein homolog, mitochondrial -0.0283948
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0283929
RNF13 ring finger protein 13 -0.0283651
DPYD dihydropyrimidine dehydrogenase -0.0281894
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.028075
IGF2BP1 insulin-like growth factor 2 mRNA binding protein 1 -0.0280501
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0280333