Regorafenib_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Regorafenib perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Regorafenib_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.120325
NDRG1 N-myc downstream regulated 1 0.110689
P4HB prolyl 4-hydroxylase, beta polypeptide 0.106469
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0767545
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0741546
CD109 CD109 molecule 0.0736577
HILPDA hypoxia inducible lipid droplet-associated 0.0705709
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0690032
FTH1 ferritin, heavy polypeptide 1 0.0682364
PLIN2 perilipin 2 0.0666767
FAM13A family with sequence similarity 13, member A 0.063445
VEGFA vascular endothelial growth factor A 0.0616761
ITGA1 integrin, alpha 1 0.0591011
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0574072
MRPS6 mitochondrial ribosomal protein S6 0.0547944
HMGA2 high mobility group AT-hook 2 0.0526624
PTMA prothymosin, alpha 0.0523341
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0514794
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0485382
CXCL8 chemokine (C-X-C motif) ligand 8 0.0458123
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0427041
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0399226
NRG1 neuregulin 1 0.0398122
RNF145 ring finger protein 145 0.0384799
ENO1 enolase 1, (alpha) 0.0357832
UBC ubiquitin C 0.0342562
HMGB3 high mobility group box 3 0.0331757
TMEM165 transmembrane protein 165 0.0328105
STC2 stanniocalcin 2 0.0319847
FOSL1 FOS-like antigen 1 0.0313763
HDGF hepatoma-derived growth factor 0.0307719
UBA6 ubiquitin-like modifier activating enzyme 6 0.0296828
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0294162
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0292912
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0286501
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0284595
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0271938
ZNF292 zinc finger protein 292 0.0266993
PCBP2 poly(rC) binding protein 2 0.0264046
INSIG2 insulin induced gene 2 0.0262313
PER1 period circadian clock 1 0.0261029
PRELID2 PRELI domain containing 2 0.0256238
SMOX spermine oxidase 0.0256136
SRP54 signal recognition particle 54kDa 0.0254967
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.0254752
DDIT4 DNA-damage-inducible transcript 4 0.0253181
CANX calnexin 0.0252081
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0245776
ZFP36L1 ZFP36 ring finger protein-like 1 0.0244101
RUNX2 runt-related transcription factor 2 0.0243875
SEC23A Sec23 homolog A (S. cerevisiae) 0.0242732
RAB6A RAB6A, member RAS oncogene family 0.0241955
PDIA4 protein disulfide isomerase family A, member 4 0.0241497
BHLHE40 basic helix-loop-helix family, member e40 0.0234725
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0233131
IGFBP3 insulin-like growth factor binding protein 3 0.0228482
ENO2 enolase 2 (gamma, neuronal) 0.0227565
PDIA6 protein disulfide isomerase family A, member 6 0.0225477
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0224256
LIMCH1 LIM and calponin homology domains 1 0.0224156
PKM pyruvate kinase, muscle 0.0223184
RPL4 ribosomal protein L4 0.0221465
PDIA3 protein disulfide isomerase family A, member 3 0.0221084
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.021713
LRP5 low density lipoprotein receptor-related protein 5 0.0217085
PGK1 phosphoglycerate kinase 1 0.0213685
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0204876
ADAM17 ADAM metallopeptidase domain 17 0.0203757
GNPDA1 glucosamine-6-phosphate deaminase 1 0.01979
SFXN1 sideroflexin 1 0.0197261
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0194502
CALR calreticulin 0.0192669
IFI27 interferon, alpha-inducible protein 27 0.0189002
TPM3 tropomyosin 3 0.0186645
RPL13A ribosomal protein L13a 0.0186287
CCNL1 cyclin L1 0.0186081
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0185106
BSG basigin (Ok blood group) 0.0182906
ESYT2 extended synaptotagmin-like protein 2 0.0182109
GRB10 growth factor receptor-bound protein 10 0.0180305
CD46 CD46 molecule, complement regulatory protein 0.0180012
SFMBT2 Scm-like with four mbt domains 2 0.0179945
RIC1 RAB6A GEF complex partner 1 0.0176579
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0172889
HELZ helicase with zinc finger 0.0168864
COPA coatomer protein complex, subunit alpha 0.016879
RNF24 ring finger protein 24 0.0167218
IRAK3 interleukin-1 receptor-associated kinase 3 0.0164351
FOSL2 FOS-like antigen 2 0.0163062
FAM20C family with sequence similarity 20, member C 0.0162993
SOD2 superoxide dismutase 2, mitochondrial 0.0162352
ATG14 autophagy related 14 0.016204
BCLAF1 BCL2-associated transcription factor 1 0.0161765
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial 0.0156734
PFN1 profilin 1 0.0154958
FLNB filamin B, beta 0.0154799
CLMN calmin (calponin-like, transmembrane) 0.0153875
FAM193B family with sequence similarity 193, member B 0.0153717
APOLD1 apolipoprotein L domain containing 1 0.0153652
PFKP phosphofructokinase, platelet 0.0151298

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.299297
EXT1 exostosin glycosyltransferase 1 -0.162683
ASPH aspartate beta-hydroxylase -0.0918047
SFTPA2 surfactant protein A2 -0.0911667
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0819746
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0756797
VCL vinculin -0.0734225
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0686269
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0673371
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0653808
FN1 fibronectin 1 -0.0653604
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0612652
NAMPT nicotinamide phosphoribosyltransferase -0.060515
TPT1 tumor protein, translationally-controlled 1 -0.0602019
JMJD1C jumonji domain containing 1C -0.0597423
SMYD3 SET and MYND domain containing 3 -0.05832
TMEM156 transmembrane protein 156 -0.0558601
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0557327
ANKRD28 ankyrin repeat domain 28 -0.0544821
SVIL supervillin -0.050992
OSMR oncostatin M receptor -0.0496515
MAP1B microtubule-associated protein 1B -0.049647
PRRC2C proline-rich coiled-coil 2C -0.0496273
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0487621
NIPBL Nipped-B homolog (Drosophila) -0.0476859
MT2A metallothionein 2A -0.0476362
ELL2 elongation factor, RNA polymerase II, 2 -0.046999
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0461434
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0454072
CLTC clathrin, heavy chain (Hc) -0.0448616
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0400464
BICD1 bicaudal D homolog 1 (Drosophila) -0.0398776
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0393508
IL6ST interleukin 6 signal transducer -0.0388639
DST dystonin -0.0388101
EIF1 eukaryotic translation initiation factor 1 -0.0387658
LTBP1 latent transforming growth factor beta binding protein 1 -0.0386298
AHR aryl hydrocarbon receptor -0.0385308
HLA-B major histocompatibility complex, class I, B -0.0374651
RAB10 RAB10, member RAS oncogene family -0.0374626
TXNRD1 thioredoxin reductase 1 -0.0372377
FTL ferritin, light polypeptide -0.0368293
CSNK1A1 casein kinase 1, alpha 1 -0.0359921
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0358879
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0353204
PDE4D phosphodiesterase 4D, cAMP-specific -0.0352761
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0351941
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 -0.0345724
PELI1 pellino E3 ubiquitin protein ligase 1 -0.034147
MBNL1 muscleblind-like splicing regulator 1 -0.0335833
S100A10 S100 calcium binding protein A10 -0.0333765
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0333522
ARF1 ADP-ribosylation factor 1 -0.0331744
FOXP1 forkhead box P1 -0.0330766
PALLD palladin, cytoskeletal associated protein -0.0329268
RPL38 ribosomal protein L38 -0.0322216
APP amyloid beta (A4) precursor protein -0.0320656
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0320468
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0317967
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0317446
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0317214
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0316063
MAPK8 mitogen-activated protein kinase 8 -0.0314073
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0313783
GOLT1B golgi transport 1B -0.0311476
PDLIM5 PDZ and LIM domain 5 -0.0308029
RPS24 ribosomal protein S24 -0.030565
RBM39 RNA binding motif protein 39 -0.0303258
RASAL2 RAS protein activator like 2 -0.0301806
CAPN2 calpain 2, (m/II) large subunit -0.030172
FNDC3A fibronectin type III domain containing 3A -0.0296239
NEK7 NIMA-related kinase 7 -0.0281854
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0281733
NTN4 netrin 4 -0.0281195
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0276794
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0276772
ACTG1 actin gamma 1 -0.0272965
ATF6 activating transcription factor 6 -0.0272301
ZNF217 zinc finger protein 217 -0.0272086
SEPTIN9 septin 9 -0.0271593
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0269356
IFI6 interferon, alpha-inducible protein 6 -0.0269054
NRIP1 nuclear receptor interacting protein 1 -0.0268989
ZFAND3 zinc finger, AN1-type domain 3 -0.0267426
HSPA8 heat shock 70kDa protein 8 -0.0267303
NCOA7 nuclear receptor coactivator 7 -0.026657
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0266022
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0265434
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0264736
TRA2A transformer 2 alpha homolog (Drosophila) -0.0264247
TFPI2 tissue factor pathway inhibitor 2 -0.0263963
CEP350 centrosomal protein 350kDa -0.026329
RANBP17 RAN binding protein 17 -0.0261552
DNM1L dynamin 1-like -0.0257906
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0255781
CENPF centromere protein F, 350/400kDa -0.0255677
SIK3 SIK family kinase 3 -0.0253568
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0252754
GPHN gephyrin -0.0251451
EMP1 epithelial membrane protein 1 -0.025068