| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Retinoic acid perturbation in C32 cell line (Tahoe Therapeutics) |
| Similar Terms | |
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200 genes differentially expressed following the Retinoic acid_C32 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| NLGN1 | neuroligin 1 | 0.177401 |
| MAGI2 | membrane associated guanylate kinase, WW and PDZ domain containing 2 | 0.167934 |
| IMMP2L | IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) | 0.157944 |
| GPC6 | glypican 6 | 0.148975 |
| MDGA2 | MAM domain containing glycosylphosphatidylinositol anchor 2 | 0.142146 |
| ASPH | aspartate beta-hydroxylase | 0.142109 |
| IGFBP5 | insulin-like growth factor binding protein 5 | 0.115316 |
| PITPNC1 | phosphatidylinositol transfer protein, cytoplasmic 1 | 0.103533 |
| GBE1 | glucan (1,4-alpha-), branching enzyme 1 | 0.0954134 |
| CTTNBP2 | cortactin binding protein 2 | 0.0821075 |
| PFKFB4 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 | 0.0802537 |
| SCD | stearoyl-CoA desaturase (delta-9-desaturase) | 0.0795966 |
| PCDH7 | protocadherin 7 | 0.0792903 |
| PLOD2 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 | 0.0788827 |
| PTK2 | protein tyrosine kinase 2 | 0.0754496 |
| SETBP1 | SET binding protein 1 | 0.0702454 |
| PPFIA4 | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 | 0.0690564 |
| ATXN1 | ataxin 1 | 0.0681055 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | 0.0625062 |
| NDRG1 | N-myc downstream regulated 1 | 0.0623031 |
| TIMP3 | TIMP metallopeptidase inhibitor 3 | 0.059592 |
| PRELID2 | PRELI domain containing 2 | 0.0592871 |
| HIVEP3 | human immunodeficiency virus type I enhancer binding protein 3 | 0.0592557 |
| MAML3 | mastermind-like 3 (Drosophila) | 0.0527523 |
| NBAS | neuroblastoma amplified sequence | 0.0518597 |
| VGF | VGF nerve growth factor inducible | 0.0508551 |
| MT2A | metallothionein 2A | 0.0500786 |
| TRIM2 | tripartite motif containing 2 | 0.0473628 |
| TBC1D22A | TBC1 domain family, member 22A | 0.0462599 |
| VIM | vimentin | 0.0435727 |
| ITPR1 | inositol 1,4,5-trisphosphate receptor, type 1 | 0.0434298 |
| KTN1 | kinectin 1 (kinesin receptor) | 0.0434181 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 | 0.0433601 |
| HILPDA | hypoxia inducible lipid droplet-associated | 0.0431774 |
| TMEM178B | transmembrane protein 178B | 0.0418132 |
| NAV1 | neuron navigator 1 | 0.0412856 |
| ESYT2 | extended synaptotagmin-like protein 2 | 0.0408013 |
| LEF1 | lymphoid enhancer-binding factor 1 | 0.0407714 |
| PTPRM | protein tyrosine phosphatase, receptor type, M | 0.040515 |
| ZNF638 | zinc finger protein 638 | 0.0399823 |
| FRMD4A | FERM domain containing 4A | 0.0397607 |
| CDK14 | cyclin-dependent kinase 14 | 0.0395187 |
| EXOC4 | exocyst complex component 4 | 0.0392079 |
| SMYD3 | SET and MYND domain containing 3 | 0.0390515 |
| LINGO2 | leucine rich repeat and Ig domain containing 2 | 0.0383929 |
| ASAP1 | ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 | 0.0382055 |
| UTRN | utrophin | 0.0373813 |
| ENO1 | enolase 1, (alpha) | 0.0373697 |
| FLNB | filamin B, beta | 0.0371796 |
| NUCKS1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 | 0.0371144 |
| ZNF704 | zinc finger protein 704 | 0.0368819 |
| SOX5 | SRY (sex determining region Y)-box 5 | 0.0364889 |
| RFX7 | regulatory factor X, 7 | 0.0362407 |
| FMNL2 | formin-like 2 | 0.0361514 |
| CENPF | centromere protein F, 350/400kDa | 0.0357097 |
| LAMB1 | laminin, beta 1 | 0.035567 |
| TMTC2 | transmembrane and tetratricopeptide repeat containing 2 | 0.03553 |
| LRMDA | leucine rich melanocyte differentiation associated | 0.035405 |
| CABIN1 | calcineurin binding protein 1 | 0.035062 |
| PDK3 | pyruvate dehydrogenase kinase, isozyme 3 | 0.0348885 |
| CTBP2 | C-terminal binding protein 2 | 0.034527 |
| KIRREL1 | kirre like nephrin family adhesion molecule 1 | 0.0345136 |
| ENO2 | enolase 2 (gamma, neuronal) | 0.0338222 |
| PARVB | parvin, beta | 0.0337831 |
| LARGE1 | LARGE xylosyl- and glucuronyltransferase 1 | 0.0332869 |
| UBR5 | ubiquitin protein ligase E3 component n-recognin 5 | 0.033026 |
| KDM4C | lysine (K)-specific demethylase 4C | 0.0329946 |
| MACF1 | microtubule-actin crosslinking factor 1 | 0.0324179 |
| MARK3 | MAP/microtubule affinity-regulating kinase 3 | 0.0320863 |
| MRPS6 | mitochondrial ribosomal protein S6 | 0.0318217 |
| OSBPL10 | oxysterol binding protein-like 10 | 0.0317644 |
| LDHA | lactate dehydrogenase A | 0.0315696 |
| AGAP1 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 | 0.0312727 |
| SAMD4A | sterile alpha motif domain containing 4A | 0.0309628 |
| PKM | pyruvate kinase, muscle | 0.0306245 |
| LMNA | lamin A/C | 0.0301935 |
| RNF24 | ring finger protein 24 | 0.0297927 |
| KDM2A | lysine (K)-specific demethylase 2A | 0.0297805 |
| SOX13 | SRY (sex determining region Y)-box 13 | 0.0296225 |
| ZBTB20 | zinc finger and BTB domain containing 20 | 0.029391 |
| HMGA2 | high mobility group AT-hook 2 | 0.0293802 |
| NEGR1 | neuronal growth regulator 1 | 0.0293437 |
| DST | dystonin | 0.0291698 |
| ABTB2 | ankyrin repeat and BTB (POZ) domain containing 2 | 0.0288302 |
| BCAS3 | breast carcinoma amplified sequence 3 | 0.0286802 |
| NAALADL2 | N-acetylated alpha-linked acidic dipeptidase-like 2 | 0.028642 |
| EYA1 | EYA transcriptional coactivator and phosphatase 1 | 0.0285136 |
| KDM2B | lysine (K)-specific demethylase 2B | 0.0284478 |
| FBXL7 | F-box and leucine-rich repeat protein 7 | 0.0284011 |
| UAP1 | UDP-N-acetylglucosamine pyrophosphorylase 1 | 0.0281901 |
| RNASE12 | ribonuclease, RNase A family, 12 (non-active) | 0.0281753 |
| TIMP2 | TIMP metallopeptidase inhibitor 2 | 0.0280282 |
| SNTB1 | syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) | 0.0276434 |
| TANC2 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 | 0.0272323 |
| SMG1 | SMG1 phosphatidylinositol 3-kinase-related kinase | 0.0270275 |
| SLC2A3 | solute carrier family 2 (facilitated glucose transporter), member 3 | 0.0268079 |
| RBFOX2 | RNA binding protein, fox-1 homolog (C. elegans) 2 | 0.0267644 |
| FRYL | FRY-like | 0.0266567 |
| CUX1 | cut-like homeobox 1 | 0.0266034 |
| SND1 | staphylococcal nuclease and tudor domain containing 1 | 0.0266029 |
| Symbol | Name | Standardized Value |
|---|---|---|
| FMN1 | formin 1 | -0.150752 |
| NAMPT | nicotinamide phosphoribosyltransferase | -0.14997 |
| FN1 | fibronectin 1 | -0.13295 |
| SERPINE2 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 | -0.126445 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | -0.0947557 |
| PTPN12 | protein tyrosine phosphatase, non-receptor type 12 | -0.0824005 |
| CDC73 | cell division cycle 73 | -0.0719154 |
| HIF1A | hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) | -0.0714198 |
| IGFBP3 | insulin-like growth factor binding protein 3 | -0.0679495 |
| ERO1A | endoplasmic reticulum oxidoreductase 1 alpha | -0.0596789 |
| PI15 | peptidase inhibitor 15 | -0.0589325 |
| TNNC1 | troponin C type 1 (slow) | -0.0577441 |
| NPC1 | Niemann-Pick disease, type C1 | -0.0537168 |
| VCL | vinculin | -0.0518547 |
| MDM2 | MDM2 proto-oncogene, E3 ubiquitin protein ligase | -0.0508916 |
| IFI16 | interferon, gamma-inducible protein 16 | -0.050841 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.0492839 |
| MKLN1 | muskelin 1, intracellular mediator containing kelch motifs | -0.048239 |
| BRAF | B-Raf proto-oncogene, serine/threonine kinase | -0.0462783 |
| SMURF1 | SMAD specific E3 ubiquitin protein ligase 1 | -0.0446422 |
| AKAP12 | A kinase (PRKA) anchor protein 12 | -0.0426144 |
| UBE2H | ubiquitin-conjugating enzyme E2H | -0.0417396 |
| RAD21 | RAD21 homolog (S. pombe) | -0.040982 |
| NCOA7 | nuclear receptor coactivator 7 | -0.0407599 |
| RTN4 | reticulon 4 | -0.0407055 |
| DCBLD2 | discoidin, CUB and LCCL domain containing 2 | -0.040683 |
| HBP1 | HMG-box transcription factor 1 | -0.0401815 |
| A2M | alpha-2-macroglobulin | -0.0397247 |
| HMCN1 | hemicentin 1 | -0.0395601 |
| RNF145 | ring finger protein 145 | -0.0387194 |
| PAN3 | PAN3 poly(A) specific ribonuclease subunit | -0.0385221 |
| ZNF292 | zinc finger protein 292 | -0.0372497 |
| INPP5F | inositol polyphosphate-5-phosphatase F | -0.0371809 |
| EPS8 | epidermal growth factor receptor pathway substrate 8 | -0.0366832 |
| CPEB2 | cytoplasmic polyadenylation element binding protein 2 | -0.0355192 |
| CAPZA2 | capping protein (actin filament) muscle Z-line, alpha 2 | -0.0350228 |
| LOC112694756 | uncharaterized LOC112694756 | -0.0348843 |
| NEK7 | NIMA-related kinase 7 | -0.0339992 |
| ARHGAP5 | Rho GTPase activating protein 5 | -0.0338573 |
| ICAM1 | intercellular adhesion molecule 1 | -0.0334204 |
| PNPLA8 | patatin-like phospholipase domain containing 8 | -0.0328933 |
| COL19A1 | collagen, type XIX, alpha 1 | -0.0322763 |
| RHEB | Ras homolog enriched in brain | -0.0319576 |
| AHR | aryl hydrocarbon receptor | -0.0315891 |
| MITF | microphthalmia-associated transcription factor | -0.0315773 |
| PPP2CA | protein phosphatase 2, catalytic subunit, alpha isozyme | -0.030971 |
| WSB1 | WD repeat and SOCS box containing 1 | -0.0308159 |
| ZKSCAN1 | zinc finger with KRAB and SCAN domains 1 | -0.030665 |
| APP | amyloid beta (A4) precursor protein | -0.0305245 |
| SPRED1 | sprouty-related, EVH1 domain containing 1 | -0.0298008 |
| ARL6IP1 | ADP-ribosylation factor-like 6 interacting protein 1 | -0.0294326 |
| RBM33 | RNA binding motif protein 33 | -0.0293852 |
| ANKRD28 | ankyrin repeat domain 28 | -0.0291941 |
| RBM39 | RNA binding motif protein 39 | -0.0284153 |
| SPRED2 | sprouty-related, EVH1 domain containing 2 | -0.0281757 |
| SYPL1 | synaptophysin-like 1 | -0.0276383 |
| BHLHE40 | basic helix-loop-helix family, member e40 | -0.0275651 |
| RPS6KA3 | ribosomal protein S6 kinase, 90kDa, polypeptide 3 | -0.0275084 |
| BIRC2 | baculoviral IAP repeat containing 2 | -0.0270646 |
| EGLN1 | egl-9 family hypoxia-inducible factor 1 | -0.0265529 |
| RHOA | ras homolog family member A | -0.0260157 |
| ABL2 | ABL proto-oncogene 2, non-receptor tyrosine kinase | -0.0258981 |
| ACSL3 | acyl-CoA synthetase long-chain family member 3 | -0.0254718 |
| ZFAND6 | zinc finger, AN1-type domain 6 | -0.0253444 |
| CUL3 | cullin 3 | -0.0249799 |
| MRTFA | myocardin related transcription factor A | -0.02488 |
| MBNL2 | muscleblind-like splicing regulator 2 | -0.0245318 |
| NFE2L2 | nuclear factor, erythroid 2-like 2 | -0.0244632 |
| PUM1 | pumilio RNA-binding family member 1 | -0.0244041 |
| SERINC1 | serine incorporator 1 | -0.024148 |
| SRPK2 | SRSF protein kinase 2 | -0.0240245 |
| REV3L | REV3-like, polymerase (DNA directed), zeta, catalytic subunit | -0.0240045 |
| RAP1B | RAP1B, member of RAS oncogene family | -0.0236206 |
| MT1X | metallothionein 1X | -0.0232486 |
| RHOJ | ras homolog family member J | -0.0231678 |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) | -0.0231258 |
| EWSR1 | EWS RNA-binding protein 1 | -0.0230415 |
| DDX5 | DEAD (Asp-Glu-Ala-Asp) box helicase 5 | -0.0225928 |
| G3BP1 | GTPase activating protein (SH3 domain) binding protein 1 | -0.0225904 |
| FOXJ3 | forkhead box J3 | -0.0219738 |
| KBTBD2 | kelch repeat and BTB (POZ) domain containing 2 | -0.0218517 |
| SBF2 | SET binding factor 2 | -0.0217768 |
| AHNAK | AHNAK nucleoprotein | -0.0217364 |
| ODR4 | odr-4 GPCR localization factor homolog | -0.0217357 |
| GDF15 | growth differentiation factor 15 | -0.0217118 |
| ARFGEF2 | ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) | -0.0215942 |
| ST3GAL6 | ST3 beta-galactoside alpha-2,3-sialyltransferase 6 | -0.0215661 |
| WDR45B | WD repeat domain 45B | -0.0213655 |
| RAD23B | RAD23 homolog B (S. cerevisiae) | -0.0209352 |
| PJA2 | praja ring finger 2, E3 ubiquitin protein ligase | -0.0206282 |
| CTNND1 | catenin (cadherin-associated protein), delta 1 | -0.0205338 |
| SDC2 | syndecan 2 | -0.02044 |
| CD55 | CD55 molecule, decay accelerating factor for complement (Cromer blood group) | -0.0201544 |
| TMEM87A | transmembrane protein 87A | -0.020096 |
| SLC25A36 | solute carrier family 25 (pyrimidine nucleotide carrier), member 36 | -0.0199926 |
| MAP3K2 | mitogen-activated protein kinase kinase kinase 2 | -0.0199369 |
| UBC | ubiquitin C | -0.019605 |
| MTPN | myotrophin | -0.0194922 |
| ANXA2 | annexin A2 | -0.0194776 |
| WWTR1 | WW domain containing transcription regulator 1 | -0.0193289 |
