| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Retinoic acid perturbation in COLO 205 cell line (Tahoe Therapeutics) |
| Similar Terms | |
| Downloads & Tools |
200 genes differentially expressed following the Retinoic acid_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| LMO7 | LIM domain 7 | 0.174315 |
| SMAD3 | SMAD family member 3 | 0.131534 |
| NFAT5 | nuclear factor of activated T-cells 5, tonicity-responsive | 0.122241 |
| SPTBN1 | spectrin, beta, non-erythrocytic 1 | 0.106586 |
| AKAP13 | A kinase (PRKA) anchor protein 13 | 0.102325 |
| LRCH1 | leucine-rich repeats and calponin homology (CH) domain containing 1 | 0.0993645 |
| DNAJC15 | DnaJ (Hsp40) homolog, subfamily C, member 15 | 0.0920648 |
| MACC1 | metastasis associated in colon cancer 1 | 0.0810976 |
| SIPA1L2 | signal-induced proliferation-associated 1 like 2 | 0.0797531 |
| MAN1A1 | mannosidase, alpha, class 1A, member 1 | 0.0749803 |
| MYO1E | myosin IE | 0.0686962 |
| NRIP1 | nuclear receptor interacting protein 1 | 0.0669513 |
| LCN2 | lipocalin 2 | 0.0629035 |
| SHB | Src homology 2 domain containing adaptor protein B | 0.0610625 |
| ITGA2 | integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) | 0.0573342 |
| BCL2L1 | BCL2-like 1 | 0.0552097 |
| B4GALT5 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 | 0.0550946 |
| TNFRSF21 | tumor necrosis factor receptor superfamily, member 21 | 0.0541173 |
| TMTC2 | transmembrane and tetratricopeptide repeat containing 2 | 0.0525163 |
| ANXA2 | annexin A2 | 0.050679 |
| ETV6 | ets variant 6 | 0.0504782 |
| SLC12A2 | solute carrier family 12 (sodium/potassium/chloride transporter), member 2 | 0.0489017 |
| CHST11 | carbohydrate (chondroitin 4) sulfotransferase 11 | 0.0480281 |
| VCL | vinculin | 0.0476605 |
| ASPH | aspartate beta-hydroxylase | 0.0464691 |
| N4BP2L2 | NEDD4 binding protein 2-like 2 | 0.0442924 |
| STK24 | serine/threonine kinase 24 | 0.0439674 |
| ERBIN | erbb2 interacting protein | 0.0434016 |
| HIVEP2 | human immunodeficiency virus type I enhancer binding protein 2 | 0.0429578 |
| ADAM10 | ADAM metallopeptidase domain 10 | 0.0429297 |
| TJP1 | tight junction protein 1 | 0.0429162 |
| DIAPH1 | diaphanous-related formin 1 | 0.0424067 |
| FTH1 | ferritin, heavy polypeptide 1 | 0.0423469 |
| ERN1 | endoplasmic reticulum to nucleus signaling 1 | 0.0392533 |
| YAP1 | Yes-associated protein 1 | 0.0389992 |
| EPS8 | epidermal growth factor receptor pathway substrate 8 | 0.0388933 |
| LPP | LIM domain containing preferred translocation partner in lipoma | 0.0380315 |
| HUWE1 | HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase | 0.0377653 |
| YWHAZ | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta | 0.0368402 |
| IFNGR1 | interferon gamma receptor 1 | 0.036541 |
| VMP1 | vacuole membrane protein 1 | 0.0363074 |
| MCTP1 | multiple C2 domains, transmembrane 1 | 0.0359194 |
| PRSS22 | protease, serine, 22 | 0.035078 |
| XDH | xanthine dehydrogenase | 0.0350051 |
| C6ORF132 | chromosome 6 open reading frame 132 | 0.0348206 |
| MPRIP | myosin phosphatase Rho interacting protein | 0.0345462 |
| MAP4K4 | mitogen-activated protein kinase kinase kinase kinase 4 | 0.0341911 |
| KYNU | kynureninase | 0.0340433 |
| CTNNB1 | catenin (cadherin-associated protein), beta 1, 88kDa | 0.0337265 |
| BAIAP2L1 | BAI1-associated protein 2-like 1 | 0.033463 |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A | 0.0333634 |
| OAS3 | 2'-5'-oligoadenylate synthetase 3, 100kDa | 0.0328584 |
| DUSP10 | dual specificity phosphatase 10 | 0.0322122 |
| MCL1 | myeloid cell leukemia 1 | 0.0318371 |
| CTNNA1 | catenin (cadherin-associated protein), alpha 1, 102kDa | 0.0316469 |
| PKM | pyruvate kinase, muscle | 0.0313639 |
| CTBP2 | C-terminal binding protein 2 | 0.0313009 |
| FNDC3A | fibronectin type III domain containing 3A | 0.0311217 |
| EREG | epiregulin | 0.0308979 |
| SPRED1 | sprouty-related, EVH1 domain containing 1 | 0.0305022 |
| DNAJC3 | DnaJ (Hsp40) homolog, subfamily C, member 3 | 0.0304625 |
| EML4 | echinoderm microtubule associated protein like 4 | 0.0302197 |
| SIK3 | SIK family kinase 3 | 0.0299868 |
| DIP2B | DIP2 disco-interacting protein 2 homolog B (Drosophila) | 0.0299683 |
| SERPINB1 | serpin peptidase inhibitor, clade B (ovalbumin), member 1 | 0.0299455 |
| PPP1R15A | protein phosphatase 1, regulatory subunit 15A | 0.0297286 |
| TM4SF19 | transmembrane 4 L six family member 19 | 0.0294635 |
| ZNF292 | zinc finger protein 292 | 0.0288603 |
| TCF7L2 | transcription factor 7-like 2 (T-cell specific, HMG-box) | 0.0287371 |
| HKDC1 | hexokinase domain containing 1 | 0.0282147 |
| ST14 | suppression of tumorigenicity 14 (colon carcinoma) | 0.0281655 |
| CLOCK | clock circadian regulator | 0.0281301 |
| SRRM2 | serine/arginine repetitive matrix 2 | 0.0280158 |
| NFKB1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 | 0.0278398 |
| ELOF1 | elongation factor 1 homolog (S. cerevisiae) | 0.0276031 |
| PADI1 | peptidyl arginine deiminase, type I | 0.0275929 |
| EZR | ezrin | 0.027334 |
| CXCL8 | chemokine (C-X-C motif) ligand 8 | 0.0268496 |
| MTUS1 | microtubule associated tumor suppressor 1 | 0.0267796 |
| CCNL1 | cyclin L1 | 0.026656 |
| LIMA1 | LIM domain and actin binding 1 | 0.0266277 |
| DPP4 | dipeptidyl-peptidase 4 | 0.0264022 |
| TXNRD1 | thioredoxin reductase 1 | 0.0263149 |
| DUSP16 | dual specificity phosphatase 16 | 0.0260973 |
| PDZD8 | PDZ domain containing 8 | 0.0258649 |
| AREG | amphiregulin | 0.0245525 |
| RDH10 | retinol dehydrogenase 10 (all-trans) | 0.0244276 |
| PITPNC1 | phosphatidylinositol transfer protein, cytoplasmic 1 | 0.0241932 |
| SLK | STE20-like kinase | 0.0232076 |
| TRIM2 | tripartite motif containing 2 | 0.0231532 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | 0.0230212 |
| MYO5B | myosin VB | 0.022786 |
| EPB41L1 | erythrocyte membrane protein band 4.1-like 1 | 0.0227762 |
| FAT1 | FAT atypical cadherin 1 | 0.0226959 |
| DST | dystonin | 0.0226528 |
| APP | amyloid beta (A4) precursor protein | 0.0226119 |
| RFFL | ring finger and FYVE-like domain containing E3 ubiquitin protein ligase | 0.0224856 |
| PDLIM5 | PDZ and LIM domain 5 | 0.0224527 |
| ITGB1 | integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) | 0.0224434 |
| AFF4 | AF4/FMR2 family, member 4 | 0.0223386 |
| Symbol | Name | Standardized Value |
|---|---|---|
| TPT1 | tumor protein, translationally-controlled 1 | -0.167183 |
| NPSR1 | neuropeptide S receptor 1 | -0.136185 |
| ZMYND8 | zinc finger, MYND-type containing 8 | -0.120631 |
| GMDS | GDP-mannose 4,6-dehydratase | -0.0980936 |
| STAT1 | signal transducer and activator of transcription 1, 91kDa | -0.0932944 |
| XAF1 | XIAP associated factor 1 | -0.0838031 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | -0.0800453 |
| HLA-B | major histocompatibility complex, class I, B | -0.0797483 |
| ARHGAP26 | Rho GTPase activating protein 26 | -0.0780692 |
| LYZ | lysozyme | -0.0722335 |
| TRIO | trio Rho guanine nucleotide exchange factor | -0.0722035 |
| PTMA | prothymosin, alpha | -0.0710021 |
| EPSTI1 | epithelial stromal interaction 1 (breast) | -0.0691047 |
| PLA2G2A | phospholipase A2, group IIA (platelets, synovial fluid) | -0.0646052 |
| H1-0 | H1.0 linker histone | -0.0621092 |
| NDRG1 | N-myc downstream regulated 1 | -0.0614179 |
| ABCA1 | ATP-binding cassette, sub-family A (ABC1), member 1 | -0.0593565 |
| MAML2 | mastermind-like 2 (Drosophila) | -0.0559904 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.0544684 |
| IGF1R | insulin-like growth factor 1 receptor | -0.0539695 |
| SYNE2 | spectrin repeat containing, nuclear envelope 2 | -0.0537473 |
| EGLN3 | egl-9 family hypoxia-inducible factor 3 | -0.0534272 |
| AHNAK | AHNAK nucleoprotein | -0.0529488 |
| BTBD9 | BTB (POZ) domain containing 9 | -0.0510967 |
| DDX60 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 | -0.0489598 |
| PARP14 | poly (ADP-ribose) polymerase family, member 14 | -0.0478328 |
| MUC20 | mucin 20, cell surface associated | -0.0452564 |
| SSH2 | slingshot protein phosphatase 2 | -0.0452223 |
| TSHZ2 | teashirt zinc finger homeobox 2 | -0.0448344 |
| PLSCR2 | phospholipid scramblase 2 | -0.0446643 |
| CSTPP1 | centriolar satellite-associated tubulin polyglutamylase complex regulator 1 | -0.0439906 |
| SP100 | SP100 nuclear antigen | -0.0425463 |
| B2M | beta-2-microglobulin | -0.0424951 |
| ZKSCAN1 | zinc finger with KRAB and SCAN domains 1 | -0.0422114 |
| TMSB10 | thymosin beta 10 | -0.0418069 |
| SLC44A1 | solute carrier family 44 (choline transporter), member 1 | -0.0402784 |
| TFRC | transferrin receptor | -0.0390051 |
| TXNIP | thioredoxin interacting protein | -0.0387691 |
| ATP1B1 | ATPase, Na+/K+ transporting, beta 1 polypeptide | -0.0379279 |
| JUN | jun proto-oncogene | -0.0370335 |
| RRBP1 | ribosome binding protein 1 | -0.0364966 |
| DSCAML1 | Down syndrome cell adhesion molecule like 1 | -0.0363087 |
| FMN1 | formin 1 | -0.0353446 |
| RPL35A | ribosomal protein L35a | -0.0352718 |
| MBNL2 | muscleblind-like splicing regulator 2 | -0.0343092 |
| RPL34 | ribosomal protein L34 | -0.0342399 |
| WSB1 | WD repeat and SOCS box containing 1 | -0.0338974 |
| EPCAM | epithelial cell adhesion molecule | -0.03366 |
| PGK1 | phosphoglycerate kinase 1 | -0.0332409 |
| PERP | PERP, TP53 apoptosis effector | -0.0327998 |
| ARHGEF38 | Rho guanine nucleotide exchange factor (GEF) 38 | -0.032707 |
| GRIN2B | glutamate receptor, ionotropic, N-methyl D-aspartate 2B | -0.0326011 |
| RPL23 | ribosomal protein L23 | -0.0316609 |
| PATJ | PATJ crumbs cell polarity complex component | -0.0313922 |
| RBM39 | RNA binding motif protein 39 | -0.0309016 |
| AGAP1 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 | -0.0299764 |
| PCK1 | phosphoenolpyruvate carboxykinase 1 (soluble) | -0.0297111 |
| GBE1 | glucan (1,4-alpha-), branching enzyme 1 | -0.0295033 |
| AP3B1 | adaptor-related protein complex 3, beta 1 subunit | -0.0294983 |
| DDX17 | DEAD (Asp-Glu-Ala-Asp) box helicase 17 | -0.0291792 |
| NT5C3A | 5'-nucleotidase, cytosolic IIIA | -0.0289383 |
| NCOA7 | nuclear receptor coactivator 7 | -0.0289272 |
| HLA-C | major histocompatibility complex, class I, C | -0.0287305 |
| PARP4 | poly (ADP-ribose) polymerase family, member 4 | -0.0286834 |
| SQSTM1 | sequestosome 1 | -0.0283276 |
| LDLRAD4 | low density lipoprotein receptor class A domain containing 4 | -0.0280624 |
| RAD51B | RAD51 paralog B | -0.0276331 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.0275457 |
| CCDC146 | coiled-coil domain containing 146 | -0.0270455 |
| PPARGC1A | peroxisome proliferator-activated receptor gamma, coactivator 1 alpha | -0.0270363 |
| NCOR1 | nuclear receptor corepressor 1 | -0.0266979 |
| NAALADL2 | N-acetylated alpha-linked acidic dipeptidase-like 2 | -0.0265748 |
| PTGR1 | prostaglandin reductase 1 | -0.0264889 |
| VOPP1 | vesicular, overexpressed in cancer, prosurvival protein 1 | -0.0262849 |
| STK39 | serine threonine kinase 39 | -0.0258881 |
| EIF1 | eukaryotic translation initiation factor 1 | -0.0257422 |
| ZBTB20 | zinc finger and BTB domain containing 20 | -0.0256413 |
| MPHOSPH8 | M-phase phosphoprotein 8 | -0.0255617 |
| SORBS1 | sorbin and SH3 domain containing 1 | -0.0255369 |
| ZMYM2 | zinc finger, MYM-type 2 | -0.0254854 |
| VDAC1 | voltage-dependent anion channel 1 | -0.0254774 |
| TNFSF10 | tumor necrosis factor (ligand) superfamily, member 10 | -0.0254378 |
| IGFBP3 | insulin-like growth factor binding protein 3 | -0.0250552 |
| WDR45B | WD repeat domain 45B | -0.0247179 |
| LLGL2 | lethal giant larvae homolog 2 (Drosophila) | -0.0245976 |
| ITGA1 | integrin, alpha 1 | -0.0245346 |
| RPS24 | ribosomal protein S24 | -0.0243801 |
| PLSCR1 | phospholipid scramblase 1 | -0.0241622 |
| MAP3K20 | mitogen-activated protein kinase kinase kinase 20 | -0.0241597 |
| ETS2 | v-ets avian erythroblastosis virus E26 oncogene homolog 2 | -0.0241449 |
| IFI6 | interferon, alpha-inducible protein 6 | -0.0239416 |
| ABLIM1 | actin binding LIM protein 1 | -0.0234227 |
| P4HA1 | prolyl 4-hydroxylase, alpha polypeptide I | -0.0232724 |
| PTPRF | protein tyrosine phosphatase, receptor type, F | -0.0229208 |
| SCD | stearoyl-CoA desaturase (delta-9-desaturase) | -0.0227148 |
| CANX | calnexin | -0.0226407 |
| CSTB | cystatin B (stefin B) | -0.0224887 |
| LCORL | ligand dependent nuclear receptor corepressor-like | -0.0221675 |
| KDM3A | lysine (K)-specific demethylase 3A | -0.0221133 |
| ZNF518A | zinc finger protein 518A | -0.0218611 |
