| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Retinoic acid perturbation in HS-578T cell line (Tahoe Therapeutics) |
| Similar Terms | |
| Downloads & Tools |
200 genes differentially expressed following the Retinoic acid_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| COL6A3 | collagen, type VI, alpha 3 | 0.194469 |
| CDH13 | cadherin 13 | 0.148228 |
| SPOCK1 | sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 | 0.115753 |
| PSD3 | pleckstrin and Sec7 domain containing 3 | 0.0939003 |
| FBN1 | fibrillin 1 | 0.0863913 |
| EXT1 | exostosin glycosyltransferase 1 | 0.0775847 |
| FNDC3B | fibronectin type III domain containing 3B | 0.0766464 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | 0.070298 |
| AHNAK | AHNAK nucleoprotein | 0.0692373 |
| ZBTB20 | zinc finger and BTB domain containing 20 | 0.0633469 |
| ASPH | aspartate beta-hydroxylase | 0.0608197 |
| LPP | LIM domain containing preferred translocation partner in lipoma | 0.053789 |
| SMYD3 | SET and MYND domain containing 3 | 0.0527744 |
| PDLIM5 | PDZ and LIM domain 5 | 0.0515045 |
| SEMA5A | sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A | 0.0510675 |
| HIVEP2 | human immunodeficiency virus type I enhancer binding protein 2 | 0.0509472 |
| ZFAND3 | zinc finger, AN1-type domain 3 | 0.0501772 |
| PTK2 | protein tyrosine kinase 2 | 0.0499174 |
| NKAIN3 | Na+/K+ transporting ATPase interacting 3 | 0.0488212 |
| KCNMA1 | potassium channel, calcium activated large conductance subfamily M alpha, member 1 | 0.048365 |
| COL5A1 | collagen, type V, alpha 1 | 0.0481175 |
| VCL | vinculin | 0.0480657 |
| PRELID2 | PRELI domain containing 2 | 0.0460781 |
| CADM1 | cell adhesion molecule 1 | 0.0446777 |
| NALF1 | NALCN channel auxiliary factor 1 | 0.0439136 |
| ASAP1 | ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 | 0.0426446 |
| ATXN1 | ataxin 1 | 0.0424709 |
| CLIC4 | chloride intracellular channel 4 | 0.0415647 |
| ZSWIM6 | zinc finger, SWIM-type containing 6 | 0.040917 |
| CTNNA1 | catenin (cadherin-associated protein), alpha 1, 102kDa | 0.04001 |
| ADAMTS6 | ADAM metallopeptidase with thrombospondin type 1 motif, 6 | 0.0398669 |
| DCBLD2 | discoidin, CUB and LCCL domain containing 2 | 0.0397616 |
| NHS | Nance-Horan syndrome (congenital cataracts and dental anomalies) | 0.0395956 |
| GBE1 | glucan (1,4-alpha-), branching enzyme 1 | 0.0394357 |
| GRB10 | growth factor receptor-bound protein 10 | 0.0385445 |
| TRIO | trio Rho guanine nucleotide exchange factor | 0.0383148 |
| MAGI2 | membrane associated guanylate kinase, WW and PDZ domain containing 2 | 0.0375022 |
| ZCCHC7 | zinc finger, CCHC domain containing 7 | 0.0374964 |
| MACF1 | microtubule-actin crosslinking factor 1 | 0.0365339 |
| ZC3HAV1 | zinc finger CCCH-type, antiviral 1 | 0.0363294 |
| GSK3B | glycogen synthase kinase 3 beta | 0.0358846 |
| CAMTA1 | calmodulin binding transcription activator 1 | 0.0355628 |
| TRPS1 | trichorhinophalangeal syndrome I | 0.0351891 |
| COL7A1 | collagen, type VII, alpha 1 | 0.034963 |
| MBNL1 | muscleblind-like splicing regulator 1 | 0.0346551 |
| LHFPL2 | lipoma HMGIC fusion partner-like 2 | 0.0344895 |
| PDIA5 | protein disulfide isomerase family A, member 5 | 0.0341527 |
| DPYD | dihydropyrimidine dehydrogenase | 0.0340261 |
| UBR4 | ubiquitin protein ligase E3 component n-recognin 4 | 0.0338428 |
| DOCK5 | dedicator of cytokinesis 5 | 0.0338378 |
| ANKRD11 | ankyrin repeat domain 11 | 0.0336231 |
| HMGA2 | high mobility group AT-hook 2 | 0.033573 |
| PLEC | plectin | 0.032903 |
| HDAC9 | histone deacetylase 9 | 0.0328629 |
| GLIS3 | GLIS family zinc finger 3 | 0.0321589 |
| VMP1 | vacuole membrane protein 1 | 0.0320265 |
| RABGEF1 | RAB guanine nucleotide exchange factor (GEF) 1 | 0.0318148 |
| INTS6 | integrator complex subunit 6 | 0.0310478 |
| EEF2 | eukaryotic translation elongation factor 2 | 0.0301247 |
| HDLBP | high density lipoprotein binding protein | 0.0294517 |
| ARHGAP35 | Rho GTPase activating protein 35 | 0.0290777 |
| HMCN1 | hemicentin 1 | 0.0287285 |
| SPDYA | speedy/RINGO cell cycle regulator family member A | 0.0285162 |
| NAV2 | neuron navigator 2 | 0.0283937 |
| PTPRG | protein tyrosine phosphatase, receptor type, G | 0.0283498 |
| RERE | arginine-glutamic acid dipeptide (RE) repeats | 0.0282057 |
| CALR | calreticulin | 0.028062 |
| FNIP1 | folliculin interacting protein 1 | 0.027986 |
| CDK13 | cyclin-dependent kinase 13 | 0.0279399 |
| ATP13A3 | ATPase type 13A3 | 0.0278522 |
| COG5 | component of oligomeric golgi complex 5 | 0.027759 |
| HYCC1 | hyccin PI4KA lipid kinase complex subunit 1 | 0.027703 |
| IQGAP1 | IQ motif containing GTPase activating protein 1 | 0.0274934 |
| TTC3 | tetratricopeptide repeat domain 3 | 0.0272035 |
| SEC61A1 | Sec61 alpha 1 subunit (S. cerevisiae) | 0.0270065 |
| AGO2 | argonaute RISC catalytic component 2 | 0.0266726 |
| ZNF644 | zinc finger protein 644 | 0.0262239 |
| IARS1 | isoleucyl-tRNA synthetase 1 | 0.0262195 |
| GFPT1 | glutamine--fructose-6-phosphate transaminase 1 | 0.0261406 |
| RIGI | RNA sensor RIG-I | 0.0255739 |
| UBC | ubiquitin C | 0.0255635 |
| KLF12 | Kruppel-like factor 12 | 0.0254764 |
| VEGFC | vascular endothelial growth factor C | 0.0254185 |
| CNTN5 | contactin 5 | 0.0254149 |
| EIF4G3 | eukaryotic translation initiation factor 4 gamma, 3 | 0.0252906 |
| FMNL2 | formin-like 2 | 0.0252424 |
| CALU | calumenin | 0.0245331 |
| EDIL3 | EGF-like repeats and discoidin I-like domains 3 | 0.0244588 |
| VPS13B | vacuolar protein sorting 13 homolog B (yeast) | 0.0243498 |
| PICALM | phosphatidylinositol binding clathrin assembly protein | 0.0243095 |
| TBC1D22A | TBC1 domain family, member 22A | 0.0239882 |
| BRIP1 | BRCA1 interacting protein C-terminal helicase 1 | 0.0236332 |
| ITPR1 | inositol 1,4,5-trisphosphate receptor, type 1 | 0.0231729 |
| DYNC1H1 | dynein, cytoplasmic 1, heavy chain 1 | 0.0229489 |
| RAD51B | RAD51 paralog B | 0.0229071 |
| TFG | TRK-fused gene | 0.022803 |
| NEK10 | NIMA-related kinase 10 | 0.0226953 |
| SOD2 | superoxide dismutase 2, mitochondrial | 0.0226677 |
| SLC4A7 | solute carrier family 4, sodium bicarbonate cotransporter, member 7 | 0.0223286 |
| GNAI3 | guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 | 0.0221286 |
| Symbol | Name | Standardized Value |
|---|---|---|
| MT2A | metallothionein 2A | -0.282886 |
| NDRG1 | N-myc downstream regulated 1 | -0.274074 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.244955 |
| TGFBI | transforming growth factor, beta-induced, 68kDa | -0.106412 |
| SERPINE1 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | -0.103085 |
| VEGFA | vascular endothelial growth factor A | -0.10217 |
| CD44 | CD44 molecule (Indian blood group) | -0.0925116 |
| RPS6 | ribosomal protein S6 | -0.0867541 |
| FTL | ferritin, light polypeptide | -0.0802488 |
| IGFBP3 | insulin-like growth factor binding protein 3 | -0.0740631 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.073762 |
| IER3 | immediate early response 3 | -0.0707451 |
| STC1 | stanniocalcin 1 | -0.0700873 |
| RPS2 | ribosomal protein S2 | -0.068556 |
| B2M | beta-2-microglobulin | -0.0659897 |
| SPARC | secreted protein, acidic, cysteine-rich (osteonectin) | -0.0637243 |
| LGALS1 | lectin, galactoside-binding, soluble, 1 | -0.0635447 |
| S100A9 | S100 calcium binding protein A9 | -0.0610575 |
| VIM | vimentin | -0.0605574 |
| EIF1 | eukaryotic translation initiation factor 1 | -0.0588706 |
| RPS8 | ribosomal protein S8 | -0.0585678 |
| RPL35A | ribosomal protein L35a | -0.0575261 |
| PTMA | prothymosin, alpha | -0.0549651 |
| HILPDA | hypoxia inducible lipid droplet-associated | -0.0522417 |
| HLA-B | major histocompatibility complex, class I, B | -0.0521459 |
| ITGA2 | integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) | -0.0515558 |
| TMSB10 | thymosin beta 10 | -0.0491 |
| MT1X | metallothionein 1X | -0.0454073 |
| LOXL2 | lysyl oxidase-like 2 | -0.0452027 |
| ERRFI1 | ERBB receptor feedback inhibitor 1 | -0.0419843 |
| F3 | coagulation factor III (thromboplastin, tissue factor) | -0.0401618 |
| RPL11 | ribosomal protein L11 | -0.0400911 |
| RPL7 | ribosomal protein L7 | -0.0397291 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | -0.0397053 |
| RPL37A | ribosomal protein L37a | -0.0389561 |
| MTSS1 | metastasis suppressor 1 | -0.0382762 |
| STAT1 | signal transducer and activator of transcription 1, 91kDa | -0.0379263 |
| ADM | adrenomedullin | -0.0374627 |
| IGFBP7 | insulin-like growth factor binding protein 7 | -0.0364161 |
| ARRDC3 | arrestin domain containing 3 | -0.0363438 |
| BHLHE40 | basic helix-loop-helix family, member e40 | -0.0358293 |
| YWHAZ | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta | -0.035719 |
| ALCAM | activated leukocyte cell adhesion molecule | -0.0356314 |
| RPS19 | ribosomal protein S19 | -0.0355547 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.0352165 |
| RPLP2 | ribosomal protein, large, P2 | -0.0351072 |
| COL1A2 | collagen, type I, alpha 2 | -0.0339972 |
| RPS12 | ribosomal protein S12 | -0.0338081 |
| RPL12 | ribosomal protein L12 | -0.0337669 |
| UQCRB | ubiquinol-cytochrome c reductase binding protein | -0.0325321 |
| CXCL8 | chemokine (C-X-C motif) ligand 8 | -0.0323736 |
| LTBP1 | latent transforming growth factor beta binding protein 1 | -0.0323211 |
| RPL30 | ribosomal protein L30 | -0.0321568 |
| RPL19 | ribosomal protein L19 | -0.0320773 |
| RPS13 | ribosomal protein S13 | -0.0318242 |
| CENPF | centromere protein F, 350/400kDa | -0.0315931 |
| ELL2 | elongation factor, RNA polymerase II, 2 | -0.0311083 |
| PSMA7 | proteasome (prosome, macropain) subunit, alpha type, 7 | -0.0300324 |
| IFI6 | interferon, alpha-inducible protein 6 | -0.0295176 |
| RPL36 | ribosomal protein L36 | -0.0291906 |
| RPLP1 | ribosomal protein, large, P1 | -0.0291474 |
| TIMP1 | TIMP metallopeptidase inhibitor 1 | -0.0290889 |
| SERPINE2 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 | -0.0288607 |
| RPL28 | ribosomal protein L28 | -0.0288202 |
| ACTG1 | actin gamma 1 | -0.0288012 |
| RPL5 | ribosomal protein L5 | -0.0287383 |
| RPS14 | ribosomal protein S14 | -0.0287375 |
| TOP2A | topoisomerase (DNA) II alpha 170kDa | -0.0271555 |
| RPL17-C18ORF32 | RPL17-C18orf32 readthrough | -0.027146 |
| S100A10 | S100 calcium binding protein A10 | -0.0265607 |
| HLA-A | major histocompatibility complex, class I, A | -0.0261097 |
| HAS2 | hyaluronan synthase 2 | -0.0260755 |
| KMT2E | lysine (K)-specific methyltransferase 2E | -0.0260076 |
| MARCKS | myristoylated alanine-rich protein kinase C substrate | -0.0258232 |
| RLF | rearranged L-myc fusion | -0.0256989 |
| FAM162A | family with sequence similarity 162, member A | -0.0255307 |
| CALM2 | calmodulin 2 (phosphorylase kinase, delta) | -0.025528 |
| RPL9 | ribosomal protein L9 | -0.0254223 |
| NAMPT | nicotinamide phosphoribosyltransferase | -0.0253653 |
| RPL37 | ribosomal protein L37 | -0.0244847 |
| POTEF | POTE ankyrin domain family, member F | -0.0244317 |
| H3-3B | H3.3 histone B | -0.0241419 |
| ECE1 | endothelin converting enzyme 1 | -0.0237737 |
| IRF1 | interferon regulatory factor 1 | -0.0236408 |
| RPL26 | ribosomal protein L26 | -0.0233804 |
| LDHA | lactate dehydrogenase A | -0.0231201 |
| RACK1 | receptor for activated C kinase 1 | -0.0230896 |
| DEPP1 | DEPP autophagy regulator 1 | -0.0229291 |
| ZNF292 | zinc finger protein 292 | -0.0228537 |
| LOC102724023 | ES1 protein homolog, mitochondrial | -0.0228384 |
| RPL32 | ribosomal protein L32 | -0.0227801 |
| RPL23 | ribosomal protein L23 | -0.0226198 |
| RPS3 | ribosomal protein S3 | -0.0223916 |
| UGCG | UDP-glucose ceramide glucosyltransferase | -0.02229 |
| RPL34 | ribosomal protein L34 | -0.0217919 |
| TNIP1 | TNFAIP3 interacting protein 1 | -0.0216412 |
| RPL8 | ribosomal protein L8 | -0.0213473 |
| PNRC1 | proline-rich nuclear receptor coactivator 1 | -0.0212787 |
| RPS16 | ribosomal protein S16 | -0.0212286 |
| BNIP3 | BCL2/adenovirus E1B 19kDa interacting protein 3 | -0.0211517 |
