| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Retinoic acid perturbation in HT-29 cell line (Tahoe Therapeutics) |
| Similar Terms | |
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200 genes differentially expressed following the Retinoic acid_HT-29 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| LMO7 | LIM domain 7 | 0.2159 |
| TNFRSF21 | tumor necrosis factor receptor superfamily, member 21 | 0.170662 |
| EXT1 | exostosin glycosyltransferase 1 | 0.122855 |
| FTH1 | ferritin, heavy polypeptide 1 | 0.106718 |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A | 0.0907317 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | 0.0891858 |
| NTN4 | netrin 4 | 0.0840152 |
| HIVEP2 | human immunodeficiency virus type I enhancer binding protein 2 | 0.0784468 |
| ATXN1 | ataxin 1 | 0.0761123 |
| ERRFI1 | ERBB receptor feedback inhibitor 1 | 0.0759041 |
| BCL2L1 | BCL2-like 1 | 0.0725003 |
| SMAD3 | SMAD family member 3 | 0.0688446 |
| NFAT5 | nuclear factor of activated T-cells 5, tonicity-responsive | 0.06323 |
| PDZD8 | PDZ domain containing 8 | 0.0624493 |
| ARHGAP29 | Rho GTPase activating protein 29 | 0.0599658 |
| ABTB2 | ankyrin repeat and BTB (POZ) domain containing 2 | 0.0582064 |
| EPS8 | epidermal growth factor receptor pathway substrate 8 | 0.0528059 |
| IGF2BP2 | insulin-like growth factor 2 mRNA binding protein 2 | 0.051989 |
| ATP2B1 | ATPase, Ca++ transporting, plasma membrane 1 | 0.0516659 |
| FHL2 | four and a half LIM domains 2 | 0.0510423 |
| SPRED2 | sprouty-related, EVH1 domain containing 2 | 0.0498254 |
| DPP4 | dipeptidyl-peptidase 4 | 0.0468356 |
| PITPNC1 | phosphatidylinositol transfer protein, cytoplasmic 1 | 0.0445143 |
| PDLIM5 | PDZ and LIM domain 5 | 0.0440862 |
| EZR | ezrin | 0.0435094 |
| CTBP2 | C-terminal binding protein 2 | 0.0419888 |
| CCNYL1 | cyclin Y-like 1 | 0.0413919 |
| RPS8 | ribosomal protein S8 | 0.0409468 |
| HSD17B2 | hydroxysteroid (17-beta) dehydrogenase 2 | 0.0405052 |
| TJP1 | tight junction protein 1 | 0.0399944 |
| ZC3HAV1 | zinc finger CCCH-type, antiviral 1 | 0.0392986 |
| PELI1 | pellino E3 ubiquitin protein ligase 1 | 0.0388342 |
| FOXO1 | forkhead box O1 | 0.0382837 |
| AFF1 | AF4/FMR2 family, member 1 | 0.0376644 |
| SERPINA1 | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 | 0.0362258 |
| PPP1R15A | protein phosphatase 1, regulatory subunit 15A | 0.0358682 |
| SPATS2L | spermatogenesis associated, serine-rich 2-like | 0.0356772 |
| LCOR | ligand dependent nuclear receptor corepressor | 0.0355689 |
| GCNT3 | glucosaminyl (N-acetyl) transferase 3, mucin type | 0.0348295 |
| ASAP1 | ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 | 0.0347183 |
| KMT2E | lysine (K)-specific methyltransferase 2E | 0.0345699 |
| RPS17 | ribosomal protein S17 | 0.0329768 |
| MYO5B | myosin VB | 0.0323871 |
| FOSB | FBJ murine osteosarcoma viral oncogene homolog B | 0.0322919 |
| DIAPH1 | diaphanous-related formin 1 | 0.0320944 |
| NEBL | nebulette | 0.0320899 |
| UBN2 | ubinuclein 2 | 0.0319287 |
| PRKN | parkin RBR E3 ubiquitin protein ligase | 0.0318212 |
| FNDC3B | fibronectin type III domain containing 3B | 0.0315586 |
| RPS3 | ribosomal protein S3 | 0.0314438 |
| VCL | vinculin | 0.0306829 |
| NEDD4L | neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase | 0.0305279 |
| VEGFA | vascular endothelial growth factor A | 0.029874 |
| ARHGAP42 | Rho GTPase activating protein 42 | 0.0297175 |
| NCEH1 | neutral cholesterol ester hydrolase 1 | 0.02944 |
| MYO1E | myosin IE | 0.0294323 |
| TMCO3 | transmembrane and coiled-coil domains 3 | 0.0293535 |
| TSPAN5 | tetraspanin 5 | 0.0290213 |
| FTL | ferritin, light polypeptide | 0.0287641 |
| SIK3 | SIK family kinase 3 | 0.0286318 |
| TBC1D8 | TBC1 domain family, member 8 (with GRAM domain) | 0.0283871 |
| GAREM1 | GRB2 associated regulator of MAPK1 subtype 1 | 0.028359 |
| ACSL3 | acyl-CoA synthetase long-chain family member 3 | 0.0282651 |
| PCCA | propionyl CoA carboxylase, alpha polypeptide | 0.0280948 |
| MBNL2 | muscleblind-like splicing regulator 2 | 0.0280126 |
| ADGRG6 | adhesion G protein-coupled receptor G6 | 0.0279839 |
| ROCK2 | Rho-associated, coiled-coil containing protein kinase 2 | 0.0279585 |
| TXNRD1 | thioredoxin reductase 1 | 0.0278826 |
| ARHGEF12 | Rho guanine nucleotide exchange factor (GEF) 12 | 0.0277414 |
| PDIA4 | protein disulfide isomerase family A, member 4 | 0.0273357 |
| SEC31A | SEC31 homolog A (S. cerevisiae) | 0.0266056 |
| SLC7A11 | solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 | 0.026355 |
| PGCKA1 | PDCD10 and GCKIII kinases associated 1 | 0.0263194 |
| JMY | junction mediating and regulatory protein, p53 cofactor | 0.0260156 |
| RPS25 | ribosomal protein S25 | 0.0258268 |
| KDM6A | lysine (K)-specific demethylase 6A | 0.0257866 |
| KTN1 | kinectin 1 (kinesin receptor) | 0.0256865 |
| LIMA1 | LIM domain and actin binding 1 | 0.0252203 |
| LATS2 | large tumor suppressor kinase 2 | 0.024866 |
| EREG | epiregulin | 0.0247205 |
| HKDC1 | hexokinase domain containing 1 | 0.0241383 |
| DUSP16 | dual specificity phosphatase 16 | 0.0239536 |
| UBE2R2 | ubiquitin-conjugating enzyme E2R 2 | 0.0236782 |
| IFIT2 | interferon-induced protein with tetratricopeptide repeats 2 | 0.0236271 |
| FAM13A | family with sequence similarity 13, member A | 0.0235214 |
| RPS13 | ribosomal protein S13 | 0.0234982 |
| PDE10A | phosphodiesterase 10A | 0.0233987 |
| SH3KBP1 | SH3-domain kinase binding protein 1 | 0.0233063 |
| ARHGAP23 | Rho GTPase activating protein 23 | 0.0232452 |
| AREG | amphiregulin | 0.0227752 |
| LPIN2 | lipin 2 | 0.0226583 |
| LURAP1L | leucine rich adaptor protein 1-like | 0.0226502 |
| CLIC5 | chloride intracellular channel 5 | 0.0226238 |
| SGMS2 | sphingomyelin synthase 2 | 0.0224089 |
| PICALM | phosphatidylinositol binding clathrin assembly protein | 0.0223649 |
| ACVR1 | activin A receptor, type I | 0.0221877 |
| GLCCI1 | glucocorticoid induced 1 | 0.0220354 |
| ITPRID2 | ITPR interacting domain containing 2 | 0.0219905 |
| DNAJC3 | DnaJ (Hsp40) homolog, subfamily C, member 3 | 0.0219454 |
| DST | dystonin | 0.0218747 |
| Symbol | Name | Standardized Value |
|---|---|---|
| CYP3A5 | cytochrome P450, family 3, subfamily A, polypeptide 5 | -0.188652 |
| AHNAK | AHNAK nucleoprotein | -0.16409 |
| SLC45A4 | solute carrier family 45, member 4 | -0.144824 |
| CD55 | CD55 molecule, decay accelerating factor for complement (Cromer blood group) | -0.129678 |
| GMDS | GDP-mannose 4,6-dehydratase | -0.123736 |
| LAMA4 | laminin, alpha 4 | -0.112738 |
| NDRG1 | N-myc downstream regulated 1 | -0.111499 |
| DIAPH2 | diaphanous-related formin 2 | -0.100644 |
| ANXA2 | annexin A2 | -0.0997472 |
| KRT8 | keratin 8, type II | -0.0965855 |
| NAALADL2 | N-acetylated alpha-linked acidic dipeptidase-like 2 | -0.0925859 |
| HNRNPA2B1 | heterogeneous nuclear ribonucleoprotein A2/B1 | -0.084701 |
| SAMD12 | sterile alpha motif domain containing 12 | -0.0835473 |
| DDX5 | DEAD (Asp-Glu-Ala-Asp) box helicase 5 | -0.0803298 |
| MYH14 | myosin, heavy chain 14, non-muscle | -0.0758538 |
| KRT20 | keratin 20, type I | -0.0693922 |
| JUN | jun proto-oncogene | -0.0675656 |
| ACTN4 | actinin, alpha 4 | -0.0667927 |
| PRELID2 | PRELI domain containing 2 | -0.065962 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.0621992 |
| NECTIN2 | nectin cell adhesion molecule 2 | -0.0603652 |
| FRY | furry homolog (Drosophila) | -0.0596304 |
| RAD21 | RAD21 homolog (S. pombe) | -0.0586537 |
| EGR1 | early growth response 1 | -0.0575838 |
| GSN | gelsolin | -0.0553183 |
| TFRC | transferrin receptor | -0.0549021 |
| ATP1B1 | ATPase, Na+/K+ transporting, beta 1 polypeptide | -0.0531328 |
| KLF10 | Kruppel-like factor 10 | -0.0530442 |
| MCL1 | myeloid cell leukemia 1 | -0.048047 |
| CAPN8 | calpain 8 | -0.0459355 |
| ADARB1 | adenosine deaminase, RNA-specific, B1 | -0.043974 |
| TMSB10 | thymosin beta 10 | -0.0432337 |
| CCSER1 | coiled-coil serine-rich protein 1 | -0.0424642 |
| EXOC4 | exocyst complex component 4 | -0.040979 |
| WASF2 | WAS protein family, member 2 | -0.0406529 |
| ACACA | acetyl-CoA carboxylase alpha | -0.0390468 |
| SQSTM1 | sequestosome 1 | -0.0389979 |
| RRBP1 | ribosome binding protein 1 | -0.0385456 |
| RBM39 | RNA binding motif protein 39 | -0.03842 |
| PARP4 | poly (ADP-ribose) polymerase family, member 4 | -0.0379471 |
| JUP | junction plakoglobin | -0.0376289 |
| PGK1 | phosphoglycerate kinase 1 | -0.0375848 |
| GARS1 | glycyl-tRNA synthetase 1 | -0.0370772 |
| ITPKC | inositol-trisphosphate 3-kinase C | -0.0364359 |
| ZBTB20 | zinc finger and BTB domain containing 20 | -0.0364082 |
| FOS | FBJ murine osteosarcoma viral oncogene homolog | -0.0363437 |
| SEMA4B | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B | -0.0363148 |
| NF1 | neurofibromin 1 | -0.0362396 |
| POF1B | premature ovarian failure, 1B | -0.0361473 |
| THOC2 | THO complex 2 | -0.0359969 |
| SDCBP | syndecan binding protein (syntenin) | -0.0357831 |
| CBL | Cbl proto-oncogene, E3 ubiquitin protein ligase | -0.0357762 |
| MAML2 | mastermind-like 2 (Drosophila) | -0.0357275 |
| DGKH | diacylglycerol kinase, eta | -0.0355533 |
| RNF213 | ring finger protein 213 | -0.0352183 |
| LRRFIP1 | leucine rich repeat (in FLII) interacting protein 1 | -0.0348385 |
| ZMYND8 | zinc finger, MYND-type containing 8 | -0.0346419 |
| IRF1 | interferon regulatory factor 1 | -0.0345778 |
| PABPC1 | poly(A) binding protein, cytoplasmic 1 | -0.0344862 |
| MMP7 | matrix metallopeptidase 7 | -0.0342007 |
| LDHA | lactate dehydrogenase A | -0.0341288 |
| PATJ | PATJ crumbs cell polarity complex component | -0.0334753 |
| NIBAN2 | niban apoptosis regulator 2 | -0.0325246 |
| FARP1 | FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) | -0.0321587 |
| ASPH | aspartate beta-hydroxylase | -0.0320797 |
| CAMK2D | calcium/calmodulin-dependent protein kinase II delta | -0.0318685 |
| INPP4B | inositol polyphosphate-4-phosphatase, type II, 105kDa | -0.0317407 |
| TM9SF3 | transmembrane 9 superfamily member 3 | -0.031481 |
| KLF3 | Kruppel-like factor 3 (basic) | -0.0311703 |
| NPSR1 | neuropeptide S receptor 1 | -0.031159 |
| MUC13 | mucin 13, cell surface associated | -0.0307902 |
| SLC16A3 | solute carrier family 16 (monocarboxylate transporter), member 3 | -0.0304997 |
| PTK2 | protein tyrosine kinase 2 | -0.0295488 |
| PTPRH | protein tyrosine phosphatase, receptor type, H | -0.0295288 |
| DSPP | dentin sialophosphoprotein | -0.0294285 |
| IGF1R | insulin-like growth factor 1 receptor | -0.0290699 |
| PRKCA | protein kinase C, alpha | -0.0287996 |
| DLG1 | discs, large homolog 1 (Drosophila) | -0.028528 |
| NUCKS1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 | -0.0283324 |
| CAMKMT | calmodulin-lysine N-methyltransferase | -0.0283114 |
| ANKHD1 | ankyrin repeat and KH domain containing 1 | -0.0278178 |
| ITGA6 | integrin, alpha 6 | -0.0278083 |
| PLOD2 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 | -0.0275201 |
| PERP | PERP, TP53 apoptosis effector | -0.0271271 |
| RPS21 | ribosomal protein S21 | -0.0270928 |
| ITGA1 | integrin, alpha 1 | -0.0268792 |
| ZNF207 | zinc finger protein 207 | -0.0268083 |
| INTS6 | integrator complex subunit 6 | -0.0266851 |
| DDIT3 | DNA-damage-inducible transcript 3 | -0.0264719 |
| CCDC91 | coiled-coil domain containing 91 | -0.0263974 |
| TRPS1 | trichorhinophalangeal syndrome I | -0.0262732 |
| SPDYA | speedy/RINGO cell cycle regulator family member A | -0.0261193 |
| PPP1R10 | protein phosphatase 1, regulatory subunit 10 | -0.0261143 |
| KLF5 | Kruppel-like factor 5 (intestinal) | -0.0260647 |
| ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein | -0.0257876 |
| PAN3 | PAN3 poly(A) specific ribonuclease subunit | -0.0257771 |
| USP34 | ubiquitin specific peptidase 34 | -0.0257455 |
| MKI67 | marker of proliferation Ki-67 | -0.0255857 |
| MECOM | MDS1 and EVI1 complex locus | -0.0254545 |
| KRT19 | keratin 19, type I | -0.0254418 |
