| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Retinoic acid perturbation in NCI-H2347 cell line (Tahoe Therapeutics) |
| Similar Terms | |
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200 genes differentially expressed following the Retinoic acid_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| FNDC3B | fibronectin type III domain containing 3B | 0.107408 |
| TRIO | trio Rho guanine nucleotide exchange factor | 0.105908 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | 0.104175 |
| GRB10 | growth factor receptor-bound protein 10 | 0.0977149 |
| SAMD4A | sterile alpha motif domain containing 4A | 0.0910019 |
| EXT1 | exostosin glycosyltransferase 1 | 0.0888245 |
| TSC22D2 | TSC22 domain family, member 2 | 0.0847474 |
| PLEC | plectin | 0.077029 |
| LIMCH1 | LIM and calponin homology domains 1 | 0.0734103 |
| ABTB2 | ankyrin repeat and BTB (POZ) domain containing 2 | 0.0701226 |
| LAMB3 | laminin, beta 3 | 0.067907 |
| ABCA1 | ATP-binding cassette, sub-family A (ABC1), member 1 | 0.0643936 |
| ZSWIM6 | zinc finger, SWIM-type containing 6 | 0.0596975 |
| AHNAK | AHNAK nucleoprotein | 0.0560132 |
| PPARD | peroxisome proliferator-activated receptor delta | 0.0538936 |
| FLNB | filamin B, beta | 0.0530974 |
| AKAP13 | A kinase (PRKA) anchor protein 13 | 0.0527894 |
| CTBP2 | C-terminal binding protein 2 | 0.0506996 |
| SMAD3 | SMAD family member 3 | 0.0503015 |
| MBOAT2 | membrane bound O-acyltransferase domain containing 2 | 0.0501886 |
| UBE2H | ubiquitin-conjugating enzyme E2H | 0.0494995 |
| PDLIM5 | PDZ and LIM domain 5 | 0.0477019 |
| MSI2 | musashi RNA-binding protein 2 | 0.0473926 |
| SMURF1 | SMAD specific E3 ubiquitin protein ligase 1 | 0.0468527 |
| PPP1R13B | protein phosphatase 1, regulatory subunit 13B | 0.0466117 |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A | 0.0442454 |
| LPP | LIM domain containing preferred translocation partner in lipoma | 0.0432458 |
| MICAL3 | microtubule associated monooxygenase, calponin and LIM domain containing 3 | 0.0430177 |
| RALGPS2 | Ral GEF with PH domain and SH3 binding motif 2 | 0.0429527 |
| LHFPL2 | lipoma HMGIC fusion partner-like 2 | 0.0403182 |
| CTNND1 | catenin (cadherin-associated protein), delta 1 | 0.0398943 |
| AFF4 | AF4/FMR2 family, member 4 | 0.0396893 |
| RAI14 | retinoic acid induced 14 | 0.0394281 |
| OGA | O-GlcNAcase | 0.0393238 |
| DUSP10 | dual specificity phosphatase 10 | 0.0388909 |
| NRIP1 | nuclear receptor interacting protein 1 | 0.038194 |
| RCOR1 | REST corepressor 1 | 0.0380179 |
| SERINC5 | serine incorporator 5 | 0.0376064 |
| NEDD4L | neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase | 0.0364772 |
| ARIH1 | ariadne RBR E3 ubiquitin protein ligase 1 | 0.0357574 |
| TUFT1 | tuftelin 1 | 0.0357164 |
| ANKRD11 | ankyrin repeat domain 11 | 0.035052 |
| PTK2 | protein tyrosine kinase 2 | 0.0347913 |
| ABL2 | ABL proto-oncogene 2, non-receptor tyrosine kinase | 0.0342084 |
| ANKRD17 | ankyrin repeat domain 17 | 0.0331383 |
| FBXO32 | F-box protein 32 | 0.0329911 |
| TJP2 | tight junction protein 2 | 0.0322806 |
| MDM2 | MDM2 proto-oncogene, E3 ubiquitin protein ligase | 0.0322721 |
| MYO1E | myosin IE | 0.0322582 |
| SH3RF1 | SH3 domain containing ring finger 1 | 0.0308044 |
| USP53 | ubiquitin specific peptidase 53 | 0.0305815 |
| WSB1 | WD repeat and SOCS box containing 1 | 0.0301333 |
| VCL | vinculin | 0.0300647 |
| UPP1 | uridine phosphorylase 1 | 0.0298993 |
| MACF1 | microtubule-actin crosslinking factor 1 | 0.0294528 |
| SPSB1 | splA/ryanodine receptor domain and SOCS box containing 1 | 0.0290252 |
| IGF2BP2 | insulin-like growth factor 2 mRNA binding protein 2 | 0.0289595 |
| PLOD2 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 | 0.0289565 |
| RABGEF1 | RAB guanine nucleotide exchange factor (GEF) 1 | 0.0284483 |
| NIPBL | Nipped-B homolog (Drosophila) | 0.0281368 |
| PGBD5 | piggyBac transposable element derived 5 | 0.0278194 |
| SDC4 | syndecan 4 | 0.0276417 |
| IGFBP3 | insulin-like growth factor binding protein 3 | 0.0276086 |
| AGAP1 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 | 0.0271831 |
| STAT3 | signal transducer and activator of transcription 3 (acute-phase response factor) | 0.0271419 |
| MYO6 | myosin VI | 0.0269325 |
| GBE1 | glucan (1,4-alpha-), branching enzyme 1 | 0.0265957 |
| AGO2 | argonaute RISC catalytic component 2 | 0.0264813 |
| NAV2 | neuron navigator 2 | 0.0263354 |
| PSD3 | pleckstrin and Sec7 domain containing 3 | 0.026266 |
| MAP1B | microtubule-associated protein 1B | 0.0262284 |
| UBE2E1 | ubiquitin-conjugating enzyme E2E 1 | 0.0261306 |
| OCLN | occludin | 0.0261005 |
| KLF7 | Kruppel-like factor 7 (ubiquitous) | 0.0260278 |
| SEMA3B | sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B | 0.0259913 |
| FGD4 | FYVE, RhoGEF and PH domain containing 4 | 0.0259553 |
| RERE | arginine-glutamic acid dipeptide (RE) repeats | 0.0259513 |
| FNIP1 | folliculin interacting protein 1 | 0.0256568 |
| TNFRSF10B | tumor necrosis factor receptor superfamily, member 10b | 0.0256039 |
| RAD51B | RAD51 paralog B | 0.0253683 |
| AHNAK2 | AHNAK nucleoprotein 2 | 0.0252642 |
| RAB7A | RAB7A, member RAS oncogene family | 0.0252231 |
| UGDH | UDP-glucose 6-dehydrogenase | 0.0250573 |
| SH3KBP1 | SH3-domain kinase binding protein 1 | 0.0246693 |
| ST14 | suppression of tumorigenicity 14 (colon carcinoma) | 0.0244815 |
| GNPDA1 | glucosamine-6-phosphate deaminase 1 | 0.0243105 |
| FBXL2 | F-box and leucine-rich repeat protein 2 | 0.02423 |
| STRN3 | striatin, calmodulin binding protein 3 | 0.0240721 |
| ARHGAP5 | Rho GTPase activating protein 5 | 0.0239531 |
| GOLGB1 | golgin B1 | 0.0237065 |
| SHB | Src homology 2 domain containing adaptor protein B | 0.0235403 |
| RBM47 | RNA binding motif protein 47 | 0.023453 |
| AFF1 | AF4/FMR2 family, member 1 | 0.0234144 |
| BASP1 | brain abundant, membrane attached signal protein 1 | 0.0233973 |
| SPTAN1 | spectrin, alpha, non-erythrocytic 1 | 0.0230581 |
| ITGA3 | integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) | 0.0227964 |
| BCL2L1 | BCL2-like 1 | 0.0227499 |
| FBXO34 | F-box protein 34 | 0.0226837 |
| JARID2 | jumonji, AT rich interactive domain 2 | 0.0226555 |
| H1-0 | H1.0 linker histone | 0.0224876 |
| Symbol | Name | Standardized Value |
|---|---|---|
| FN1 | fibronectin 1 | -0.22577 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.14711 |
| PTMA | prothymosin, alpha | -0.140769 |
| POTEF | POTE ankyrin domain family, member F | -0.136467 |
| ASPH | aspartate beta-hydroxylase | -0.117961 |
| NDRG1 | N-myc downstream regulated 1 | -0.106132 |
| NAMPT | nicotinamide phosphoribosyltransferase | -0.0945116 |
| PABPC1 | poly(A) binding protein, cytoplasmic 1 | -0.0885483 |
| NPM1 | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | -0.0840915 |
| FTL | ferritin, light polypeptide | -0.0822144 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | -0.0790239 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.0756936 |
| TOP2A | topoisomerase (DNA) II alpha 170kDa | -0.0733122 |
| RPS2 | ribosomal protein S2 | -0.0708519 |
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 | -0.0696511 |
| ZFP36L1 | ZFP36 ring finger protein-like 1 | -0.0669417 |
| DSTN | destrin (actin depolymerizing factor) | -0.0630063 |
| ACTG1 | actin gamma 1 | -0.0600492 |
| ERO1A | endoplasmic reticulum oxidoreductase 1 alpha | -0.0599444 |
| S100A6 | S100 calcium binding protein A6 | -0.0598418 |
| LAMC2 | laminin, gamma 2 | -0.058628 |
| CALM2 | calmodulin 2 (phosphorylase kinase, delta) | -0.051658 |
| EIF1 | eukaryotic translation initiation factor 1 | -0.0510337 |
| RACK1 | receptor for activated C kinase 1 | -0.0505797 |
| RPS8 | ribosomal protein S8 | -0.0492354 |
| RPS3 | ribosomal protein S3 | -0.0483549 |
| NUCKS1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 | -0.0481218 |
| UBC | ubiquitin C | -0.047962 |
| RPS6 | ribosomal protein S6 | -0.0471334 |
| GOLGA4 | golgin A4 | -0.0469933 |
| HSPA8 | heat shock 70kDa protein 8 | -0.0463135 |
| LDHA | lactate dehydrogenase A | -0.0449387 |
| HNRNPDL | heterogeneous nuclear ribonucleoprotein D-like | -0.0445467 |
| RPS13 | ribosomal protein S13 | -0.0445281 |
| RPL7 | ribosomal protein L7 | -0.0433618 |
| SET | SET nuclear proto-oncogene | -0.0433021 |
| DCBLD2 | discoidin, CUB and LCCL domain containing 2 | -0.0429801 |
| RPS12 | ribosomal protein S12 | -0.0424486 |
| TFG | TRK-fused gene | -0.0415514 |
| SLC38A1 | solute carrier family 38, member 1 | -0.040395 |
| ATP1B1 | ATPase, Na+/K+ transporting, beta 1 polypeptide | -0.0401499 |
| CCNL1 | cyclin L1 | -0.0400329 |
| CTNNB1 | catenin (cadherin-associated protein), beta 1, 88kDa | -0.0398833 |
| RPL37A | ribosomal protein L37a | -0.0391922 |
| TMSB4X | thymosin beta 4, X-linked | -0.039061 |
| PAPOLA | poly(A) polymerase alpha | -0.0385252 |
| TPM4 | tropomyosin 4 | -0.0383111 |
| RPL9 | ribosomal protein L9 | -0.03805 |
| TPM3 | tropomyosin 3 | -0.0380205 |
| RPL15 | ribosomal protein L15 | -0.0366175 |
| MSMO1 | methylsterol monooxygenase 1 | -0.0364761 |
| HDGF | hepatoma-derived growth factor | -0.03617 |
| RPL11 | ribosomal protein L11 | -0.0336925 |
| EPCAM | epithelial cell adhesion molecule | -0.0336226 |
| MAL2 | mal, T-cell differentiation protein 2 (gene/pseudogene) | -0.0336123 |
| RPS27A | ribosomal protein S27a | -0.0332336 |
| ATP5F1B | ATP synthase F1 subunit beta | -0.0322649 |
| DDIT4 | DNA-damage-inducible transcript 4 | -0.0321671 |
| RPS17 | ribosomal protein S17 | -0.0320726 |
| HMGB2 | high mobility group box 2 | -0.0319952 |
| CENPF | centromere protein F, 350/400kDa | -0.0317725 |
| RPL17-C18ORF32 | RPL17-C18orf32 readthrough | -0.0317475 |
| RPLP0 | ribosomal protein, large, P0 | -0.0309266 |
| CNBP | CCHC-type zinc finger, nucleic acid binding protein | -0.0307638 |
| RPS25 | ribosomal protein S25 | -0.0306229 |
| GOLT1B | golgi transport 1B | -0.0296362 |
| NFKBIA | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha | -0.029589 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.0295743 |
| LDHB | lactate dehydrogenase B | -0.0289405 |
| TXNRD1 | thioredoxin reductase 1 | -0.0287193 |
| CD47 | CD47 molecule | -0.0284768 |
| RPS14 | ribosomal protein S14 | -0.0283846 |
| MAP4K5 | mitogen-activated protein kinase kinase kinase kinase 5 | -0.0283309 |
| ISG15 | ISG15 ubiquitin-like modifier | -0.0282582 |
| TUBA1B | tubulin, alpha 1b | -0.0277878 |
| HNRNPA1 | heterogeneous nuclear ribonucleoprotein A1 | -0.027762 |
| TKT | transketolase | -0.0275308 |
| BNIP3L | BCL2/adenovirus E1B 19kDa interacting protein 3-like | -0.0273763 |
| RBM3 | RNA binding motif (RNP1, RRM) protein 3 | -0.0271695 |
| ITGA2 | integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) | -0.0269044 |
| RPS23 | ribosomal protein S23 | -0.0267289 |
| PKM | pyruvate kinase, muscle | -0.0265169 |
| G3BP2 | GTPase activating protein (SH3 domain) binding protein 2 | -0.0263496 |
| PGK1 | phosphoglycerate kinase 1 | -0.026283 |
| H3-3B | H3.3 histone B | -0.0262526 |
| ERRFI1 | ERBB receptor feedback inhibitor 1 | -0.026161 |
| BRD2 | bromodomain containing 2 | -0.0256507 |
| EEF2 | eukaryotic translation elongation factor 2 | -0.0256177 |
| MKI67 | marker of proliferation Ki-67 | -0.0254526 |
| ANLN | anillin, actin binding protein | -0.0253138 |
| MBNL1 | muscleblind-like splicing regulator 1 | -0.0250569 |
| EIF4G2 | eukaryotic translation initiation factor 4 gamma, 2 | -0.0250564 |
| RPL30 | ribosomal protein L30 | -0.0247635 |
| UBA6 | ubiquitin-like modifier activating enzyme 6 | -0.0247568 |
| SMC4 | structural maintenance of chromosomes 4 | -0.0245643 |
| STARD4 | StAR-related lipid transfer (START) domain containing 4 | -0.0244072 |
| CCND1 | cyclin D1 | -0.0243791 |
| PEG10 | paternally expressed 10 | -0.024306 |
| PPP2R2A | protein phosphatase 2, regulatory subunit B, alpha | -0.0241138 |
| RPL37 | ribosomal protein L37 | -0.0238712 |
