| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Retinoic acid perturbation in NCI-H596 cell line (Tahoe Therapeutics) |
| Similar Terms | |
| Downloads & Tools |
200 genes differentially expressed following the Retinoic acid_NCI-H596 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| PDE10A | phosphodiesterase 10A | 0.354091 |
| PDE4D | phosphodiesterase 4D, cAMP-specific | 0.16438 |
| PSD3 | pleckstrin and Sec7 domain containing 3 | 0.137909 |
| SMYD3 | SET and MYND domain containing 3 | 0.137787 |
| RORA | RAR-related orphan receptor A | 0.137576 |
| NALF1 | NALCN channel auxiliary factor 1 | 0.133933 |
| GPC6 | glypican 6 | 0.119431 |
| VGF | VGF nerve growth factor inducible | 0.114369 |
| CDH13 | cadherin 13 | 0.114336 |
| SEMA3A | sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A | 0.111395 |
| EFNA5 | ephrin-A5 | 0.110092 |
| CDH11 | cadherin 11, type 2, OB-cadherin (osteoblast) | 0.104559 |
| LUC7L3 | LUC7-like 3 (S. cerevisiae) | 0.0993144 |
| EXT1 | exostosin glycosyltransferase 1 | 0.0902853 |
| ROBO1 | roundabout, axon guidance receptor, homolog 1 (Drosophila) | 0.0845953 |
| NKD1 | naked cuticle homolog 1 (Drosophila) | 0.0828304 |
| SGIP1 | SH3-domain GRB2-like (endophilin) interacting protein 1 | 0.074843 |
| MYCBP2 | MYC binding protein 2, E3 ubiquitin protein ligase | 0.0678178 |
| PUM2 | pumilio RNA-binding family member 2 | 0.0638736 |
| SYT1 | synaptotagmin I | 0.0615268 |
| TENM3 | teneurin transmembrane protein 3 | 0.0608514 |
| ASPH | aspartate beta-hydroxylase | 0.0591859 |
| TOP1 | topoisomerase (DNA) I | 0.0568552 |
| SPTBN1 | spectrin, beta, non-erythrocytic 1 | 0.055468 |
| PLOD2 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 | 0.0542233 |
| PTK2 | protein tyrosine kinase 2 | 0.0523994 |
| GLIS3 | GLIS family zinc finger 3 | 0.0519421 |
| NDRG1 | N-myc downstream regulated 1 | 0.0516801 |
| UBR5 | ubiquitin protein ligase E3 component n-recognin 5 | 0.0516784 |
| NFAT5 | nuclear factor of activated T-cells 5, tonicity-responsive | 0.0502251 |
| TRIO | trio Rho guanine nucleotide exchange factor | 0.0491489 |
| DST | dystonin | 0.0486628 |
| FLNB | filamin B, beta | 0.0459114 |
| NAP1L1 | nucleosome assembly protein 1-like 1 | 0.0452871 |
| MBD5 | methyl-CpG binding domain protein 5 | 0.0438785 |
| NAV2 | neuron navigator 2 | 0.0423038 |
| NABP1 | nucleic acid binding protein 1 | 0.0421912 |
| STC1 | stanniocalcin 1 | 0.0386957 |
| OGA | O-GlcNAcase | 0.0386709 |
| IGF2 | insulin-like growth factor 2 | 0.0383926 |
| CD55 | CD55 molecule, decay accelerating factor for complement (Cromer blood group) | 0.0382038 |
| SEPTIN9 | septin 9 | 0.0373178 |
| PRELID2 | PRELI domain containing 2 | 0.0370836 |
| FBXO11 | F-box protein 11 | 0.0368218 |
| INTS6 | integrator complex subunit 6 | 0.0364599 |
| KDM3B | lysine (K)-specific demethylase 3B | 0.0354231 |
| UBE2H | ubiquitin-conjugating enzyme E2H | 0.0347637 |
| KDM4C | lysine (K)-specific demethylase 4C | 0.0336467 |
| BIRC6 | baculoviral IAP repeat containing 6 | 0.0331622 |
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 | 0.0320621 |
| ALCAM | activated leukocyte cell adhesion molecule | 0.0315677 |
| PGK1 | phosphoglycerate kinase 1 | 0.0311031 |
| TBC1D22A | TBC1 domain family, member 22A | 0.0307729 |
| CMIP | c-Maf inducing protein | 0.0304811 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | 0.02975 |
| APLP2 | amyloid beta (A4) precursor-like protein 2 | 0.0295144 |
| TAS2R14 | taste receptor, type 2, member 14 | 0.0288067 |
| MKLN1 | muskelin 1, intracellular mediator containing kelch motifs | 0.0285189 |
| NCOA3 | nuclear receptor coactivator 3 | 0.0278268 |
| FNIP1 | folliculin interacting protein 1 | 0.0266671 |
| USP34 | ubiquitin specific peptidase 34 | 0.0266507 |
| MED13 | mediator complex subunit 13 | 0.0255827 |
| NCOR1 | nuclear receptor corepressor 1 | 0.0254465 |
| ARHGAP32 | Rho GTPase activating protein 32 | 0.0251011 |
| ZNF292 | zinc finger protein 292 | 0.0250406 |
| YAP1 | Yes-associated protein 1 | 0.0246917 |
| AKAP9 | A kinase (PRKA) anchor protein 9 | 0.0241963 |
| NEBL | nebulette | 0.0240893 |
| CUL3 | cullin 3 | 0.0232017 |
| GBE1 | glucan (1,4-alpha-), branching enzyme 1 | 0.0222847 |
| AHNAK | AHNAK nucleoprotein | 0.0220559 |
| APP | amyloid beta (A4) precursor protein | 0.0209582 |
| AGAP1 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 | 0.020755 |
| EZR | ezrin | 0.020492 |
| P4HA1 | prolyl 4-hydroxylase, alpha polypeptide I | 0.0192117 |
| WWC1 | WW and C2 domain containing 1 | 0.0191225 |
| ITPR2 | inositol 1,4,5-trisphosphate receptor, type 2 | 0.0189842 |
| ZFAND3 | zinc finger, AN1-type domain 3 | 0.0183984 |
| HNRNPC | heterogeneous nuclear ribonucleoprotein C (C1/C2) | 0.0171223 |
| CERS6 | ceramide synthase 6 | 0.0170789 |
| CANX | calnexin | 0.0166429 |
| ROBO2 | roundabout, axon guidance receptor, homolog 2 (Drosophila) | 0.016137 |
| DCBLD2 | discoidin, CUB and LCCL domain containing 2 | 0.0152209 |
| SCD | stearoyl-CoA desaturase (delta-9-desaturase) | 0.0135273 |
| SDK1 | sidekick cell adhesion molecule 1 | 0.0133668 |
| COL5A2 | collagen, type V, alpha 2 | 0.013315 |
| NAMPT | nicotinamide phosphoribosyltransferase | 0.0128622 |
| ATF3 | activating transcription factor 3 | 0.0126581 |
| ELL2 | elongation factor, RNA polymerase II, 2 | 0.0125719 |
| ZSWIM6 | zinc finger, SWIM-type containing 6 | 0.0123653 |
| ANKRD17 | ankyrin repeat domain 17 | 0.0122022 |
| PRRC2C | proline-rich coiled-coil 2C | 0.0119255 |
| SYNGAP1 | synaptic Ras GTPase activating protein 1 | 0.0114146 |
| KMT2C | lysine (K)-specific methyltransferase 2C | 0.0113113 |
| PDGFA | platelet-derived growth factor alpha polypeptide | 0.0110462 |
| EIF4G2 | eukaryotic translation initiation factor 4 gamma, 2 | 0.0109366 |
| HERC4 | HECT and RLD domain containing E3 ubiquitin protein ligase 4 | 0.0105306 |
| RABGAP1L | RAB GTPase activating protein 1-like | 0.0104851 |
| RUNX1 | runt-related transcription factor 1 | 0.0102476 |
| BACE2 | beta-site APP-cleaving enzyme 2 | 0.00970707 |
| Symbol | Name | Standardized Value |
|---|---|---|
| EGFR | epidermal growth factor receptor | -0.148755 |
| ARID2 | AT rich interactive domain 2 (ARID, RFX-like) | -0.147265 |
| PTMA | prothymosin, alpha | -0.138906 |
| TMSB10 | thymosin beta 10 | -0.137632 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.114817 |
| LPP | LIM domain containing preferred translocation partner in lipoma | -0.113559 |
| ITGA6 | integrin, alpha 6 | -0.111826 |
| FN1 | fibronectin 1 | -0.108173 |
| RPS6 | ribosomal protein S6 | -0.0999449 |
| ATP2B1 | ATPase, Ca++ transporting, plasma membrane 1 | -0.0996138 |
| HNRNPA2B1 | heterogeneous nuclear ribonucleoprotein A2/B1 | -0.0981827 |
| MYO10 | myosin X | -0.0971319 |
| RBPJ | recombination signal binding protein for immunoglobulin kappa J region | -0.0952544 |
| PATJ | PATJ crumbs cell polarity complex component | -0.0947713 |
| SLTM | SAFB-like, transcription modulator | -0.0883888 |
| KPNB1 | karyopherin (importin) beta 1 | -0.0810483 |
| RPLP1 | ribosomal protein, large, P1 | -0.0808345 |
| MCL1 | myeloid cell leukemia 1 | -0.0760883 |
| MT2A | metallothionein 2A | -0.0754506 |
| TXNIP | thioredoxin interacting protein | -0.0751042 |
| ANKRD12 | ankyrin repeat domain 12 | -0.0739494 |
| FOXP1 | forkhead box P1 | -0.073053 |
| MMAB | methylmalonic aciduria (cobalamin deficiency) cblB type | -0.0725691 |
| ENO1 | enolase 1, (alpha) | -0.0711162 |
| ANXA2 | annexin A2 | -0.0702102 |
| ITGB1 | integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) | -0.0698327 |
| PRKCA | protein kinase C, alpha | -0.062811 |
| THSD4 | thrombospondin, type I, domain containing 4 | -0.0625434 |
| ANKRD11 | ankyrin repeat domain 11 | -0.0607182 |
| KTN1 | kinectin 1 (kinesin receptor) | -0.060622 |
| KANSL1 | KAT8 regulatory NSL complex subunit 1 | -0.0601598 |
| UBE2E1 | ubiquitin-conjugating enzyme E2E 1 | -0.0580791 |
| FNDC3B | fibronectin type III domain containing 3B | -0.0565779 |
| RPL23 | ribosomal protein L23 | -0.0559739 |
| ANKHD1 | ankyrin repeat and KH domain containing 1 | -0.0515272 |
| PPFIBP1 | PTPRF interacting protein, binding protein 1 (liprin beta 1) | -0.0489187 |
| LMO7 | LIM domain 7 | -0.0456942 |
| RAD51B | RAD51 paralog B | -0.0442755 |
| ANKRD28 | ankyrin repeat domain 28 | -0.0428563 |
| HIVEP3 | human immunodeficiency virus type I enhancer binding protein 3 | -0.0426945 |
| CNKSR3 | CNKSR family member 3 | -0.0426339 |
| LIMS1 | LIM and senescent cell antigen-like domains 1 | -0.0426025 |
| CEMIP | cell migration inducing protein, hyaluronan binding | -0.0416706 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | -0.0410999 |
| TTC3 | tetratricopeptide repeat domain 3 | -0.0409437 |
| PABPC1 | poly(A) binding protein, cytoplasmic 1 | -0.0403251 |
| COL6A3 | collagen, type VI, alpha 3 | -0.0371017 |
| RPS8 | ribosomal protein S8 | -0.0366536 |
| RPS12 | ribosomal protein S12 | -0.0362236 |
| DSCAM | Down syndrome cell adhesion molecule | -0.0357827 |
| LCOR | ligand dependent nuclear receptor corepressor | -0.0353364 |
| ERRFI1 | ERBB receptor feedback inhibitor 1 | -0.0338871 |
| NIPBL | Nipped-B homolog (Drosophila) | -0.032963 |
| GLG1 | golgi glycoprotein 1 | -0.0329467 |
| HIVEP2 | human immunodeficiency virus type I enhancer binding protein 2 | -0.0325256 |
| IMMP2L | IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) | -0.0317501 |
| DOCK4 | dedicator of cytokinesis 4 | -0.030975 |
| MACF1 | microtubule-actin crosslinking factor 1 | -0.0307576 |
| AKAP12 | A kinase (PRKA) anchor protein 12 | -0.0304859 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | -0.0297086 |
| ANO6 | anoctamin 6 | -0.0286299 |
| RPS25 | ribosomal protein S25 | -0.0277756 |
| YWHAZ | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta | -0.0269723 |
| BCLAF1 | BCL2-associated transcription factor 1 | -0.0252949 |
| PSEN1 | presenilin 1 | -0.0250841 |
| DYNC1H1 | dynein, cytoplasmic 1, heavy chain 1 | -0.0250384 |
| RPL12 | ribosomal protein L12 | -0.0229437 |
| ARID1B | AT rich interactive domain 1B (SWI1-like) | -0.0223448 |
| AFDN | afadin, adherens junction formation factor | -0.0222001 |
| SBF2 | SET binding factor 2 | -0.0216212 |
| MED13L | mediator complex subunit 13-like | -0.0212873 |
| SETD5 | SET domain containing 5 | -0.021071 |
| ERO1A | endoplasmic reticulum oxidoreductase 1 alpha | -0.0207988 |
| PARD3 | par-3 family cell polarity regulator | -0.0206376 |
| SERPINE1 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | -0.0203796 |
| MAML2 | mastermind-like 2 (Drosophila) | -0.0202095 |
| RPS19 | ribosomal protein S19 | -0.0195745 |
| NRIP1 | nuclear receptor interacting protein 1 | -0.0193761 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.0193051 |
| VIM | vimentin | -0.0186521 |
| BTAF1 | BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa | -0.0176826 |
| PPP6R3 | protein phosphatase 6, regulatory subunit 3 | -0.0173067 |
| YES1 | YES proto-oncogene 1, Src family tyrosine kinase | -0.0165957 |
| RNF213 | ring finger protein 213 | -0.0165806 |
| RAP1B | RAP1B, member of RAS oncogene family | -0.0158653 |
| EEF2 | eukaryotic translation elongation factor 2 | -0.015208 |
| NPM1 | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | -0.0141038 |
| ESYT2 | extended synaptotagmin-like protein 2 | -0.013344 |
| SMAD3 | SMAD family member 3 | -0.0128584 |
| RSF1 | remodeling and spacing factor 1 | -0.0122997 |
| PTPN12 | protein tyrosine phosphatase, non-receptor type 12 | -0.0122469 |
| BTBD9 | BTB (POZ) domain containing 9 | -0.0121871 |
| SLC38A2 | solute carrier family 38, member 2 | -0.0113334 |
| PTPRM | protein tyrosine phosphatase, receptor type, M | -0.0110191 |
| PCCA | propionyl CoA carboxylase, alpha polypeptide | -0.0108611 |
| CTNNA1 | catenin (cadherin-associated protein), alpha 1, 102kDa | -0.0106966 |
| ADNP | activity-dependent neuroprotector homeobox | -0.0105169 |
| N4BP2L2 | NEDD4 binding protein 2-like 2 | -0.010429 |
| PTPRG | protein tyrosine phosphatase, receptor type, G | -0.00803924 |
| DPYSL2 | dihydropyrimidinase-like 2 | -0.00791458 |
