| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Retinoic acid perturbation in SK-MEL-2 cell line (Tahoe Therapeutics) |
| Similar Terms | |
| Downloads & Tools |
200 genes differentially expressed following the Retinoic acid_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| VIM | vimentin | 0.117727 |
| GBE1 | glucan (1,4-alpha-), branching enzyme 1 | 0.102597 |
| LINGO2 | leucine rich repeat and Ig domain containing 2 | 0.0893445 |
| FNDC3B | fibronectin type III domain containing 3B | 0.0808118 |
| ASPH | aspartate beta-hydroxylase | 0.048924 |
| SIPA1L1 | signal-induced proliferation-associated 1 like 1 | 0.0465491 |
| SPAG9 | sperm associated antigen 9 | 0.0430876 |
| PPFIA1 | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 | 0.0386925 |
| JMJD1C | jumonji domain containing 1C | 0.0377811 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | 0.0374622 |
| ABTB2 | ankyrin repeat and BTB (POZ) domain containing 2 | 0.0363037 |
| CTNNA1 | catenin (cadherin-associated protein), alpha 1, 102kDa | 0.0346317 |
| UBR5 | ubiquitin protein ligase E3 component n-recognin 5 | 0.0344218 |
| HDAC9 | histone deacetylase 9 | 0.0337472 |
| NR3C1 | nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) | 0.0335803 |
| CTTN | cortactin | 0.0329777 |
| PFKFB4 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 | 0.0327716 |
| IGFBP3 | insulin-like growth factor binding protein 3 | 0.0324546 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | 0.0320776 |
| MSN | moesin | 0.0317649 |
| AFDN | afadin, adherens junction formation factor | 0.0315791 |
| PRELID2 | PRELI domain containing 2 | 0.0311232 |
| PTK2 | protein tyrosine kinase 2 | 0.0310955 |
| FMNL2 | formin-like 2 | 0.0310106 |
| RB1CC1 | RB1-inducible coiled-coil 1 | 0.0306421 |
| MED13 | mediator complex subunit 13 | 0.030466 |
| BIRC6 | baculoviral IAP repeat containing 6 | 0.0301924 |
| RUNX1 | runt-related transcription factor 1 | 0.029815 |
| AKT3 | v-akt murine thymoma viral oncogene homolog 3 | 0.0297052 |
| ZFAND3 | zinc finger, AN1-type domain 3 | 0.0294044 |
| ABL2 | ABL proto-oncogene 2, non-receptor tyrosine kinase | 0.028829 |
| OGA | O-GlcNAcase | 0.0284501 |
| TRIP12 | thyroid hormone receptor interactor 12 | 0.0283408 |
| MAP4 | microtubule-associated protein 4 | 0.0277739 |
| RERE | arginine-glutamic acid dipeptide (RE) repeats | 0.0274766 |
| PTPN12 | protein tyrosine phosphatase, non-receptor type 12 | 0.0271941 |
| NOTCH2 | notch 2 | 0.0271685 |
| ANKRD11 | ankyrin repeat domain 11 | 0.0271346 |
| FRMD5 | FERM domain containing 5 | 0.0268989 |
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 | 0.0266341 |
| SREBF2 | sterol regulatory element binding transcription factor 2 | 0.0266132 |
| ATXN1 | ataxin 1 | 0.0265401 |
| MED13L | mediator complex subunit 13-like | 0.0263563 |
| GOLGB1 | golgin B1 | 0.0262526 |
| KDM3A | lysine (K)-specific demethylase 3A | 0.0261699 |
| TXNRD1 | thioredoxin reductase 1 | 0.0261069 |
| PLOD2 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 | 0.0260491 |
| AFF4 | AF4/FMR2 family, member 4 | 0.0260371 |
| NPM1 | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | 0.0259427 |
| ELL2 | elongation factor, RNA polymerase II, 2 | 0.0256019 |
| NF1 | neurofibromin 1 | 0.0245806 |
| CDK6 | cyclin-dependent kinase 6 | 0.0240038 |
| FAM13B | family with sequence similarity 13, member B | 0.023941 |
| PABPC1 | poly(A) binding protein, cytoplasmic 1 | 0.0239242 |
| CLINT1 | clathrin interactor 1 | 0.0239089 |
| COG5 | component of oligomeric golgi complex 5 | 0.0238011 |
| ERO1A | endoplasmic reticulum oxidoreductase 1 alpha | 0.0234087 |
| FNIP1 | folliculin interacting protein 1 | 0.0233918 |
| SMAD3 | SMAD family member 3 | 0.0232251 |
| KMT2C | lysine (K)-specific methyltransferase 2C | 0.0230445 |
| PGK1 | phosphoglycerate kinase 1 | 0.0230309 |
| BBX | bobby sox homolog (Drosophila) | 0.0228808 |
| KMT2E | lysine (K)-specific methyltransferase 2E | 0.0228467 |
| MDGA2 | MAM domain containing glycosylphosphatidylinositol anchor 2 | 0.0228297 |
| PJA2 | praja ring finger 2, E3 ubiquitin protein ligase | 0.0226232 |
| IGFN1 | immunoglobulin-like and fibronectin type III domain containing 1 | 0.0225681 |
| SEC31A | SEC31 homolog A (S. cerevisiae) | 0.0223395 |
| TFG | TRK-fused gene | 0.0221858 |
| LDHA | lactate dehydrogenase A | 0.022064 |
| FOXO3 | forkhead box O3 | 0.0219633 |
| GSK3B | glycogen synthase kinase 3 beta | 0.0219523 |
| TRPC4AP | transient receptor potential cation channel, subfamily C, member 4 associated protein | 0.0217711 |
| NKTR | natural killer cell triggering receptor | 0.0217599 |
| CRIM1 | cysteine rich transmembrane BMP regulator 1 (chordin-like) | 0.0217531 |
| MAN2A1 | mannosidase, alpha, class 2A, member 1 | 0.021739 |
| BCKDHB | branched chain keto acid dehydrogenase E1, beta polypeptide | 0.0217107 |
| LAMP2 | lysosomal-associated membrane protein 2 | 0.0216671 |
| CTBP2 | C-terminal binding protein 2 | 0.0215281 |
| NEDD4L | neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase | 0.0214705 |
| ITCH | itchy E3 ubiquitin protein ligase | 0.0214035 |
| ATP13A3 | ATPase type 13A3 | 0.0213341 |
| SETD5 | SET domain containing 5 | 0.0213313 |
| HELZ | helicase with zinc finger | 0.0212871 |
| CD44 | CD44 molecule (Indian blood group) | 0.0212454 |
| CLIP4 | CAP-GLY domain containing linker protein family, member 4 | 0.0212163 |
| TRIM33 | tripartite motif containing 33 | 0.0211145 |
| MARK3 | MAP/microtubule affinity-regulating kinase 3 | 0.021106 |
| ASH1L | ash1 (absent, small, or homeotic)-like (Drosophila) | 0.0210231 |
| TASOR2 | transcription activation suppressor family member 2 | 0.0209904 |
| ANKRD1 | ankyrin repeat domain 1 (cardiac muscle) | 0.0209373 |
| B2M | beta-2-microglobulin | 0.0209015 |
| ESYT2 | extended synaptotagmin-like protein 2 | 0.0209004 |
| GLS2 | glutaminase 2 (liver, mitochondrial) | 0.0208451 |
| CAMTA1 | calmodulin binding transcription activator 1 | 0.0208406 |
| ACTG1 | actin gamma 1 | 0.0208024 |
| RTN4 | reticulon 4 | 0.0208006 |
| ANKIB1 | ankyrin repeat and IBR domain containing 1 | 0.0207318 |
| KPNB1 | karyopherin (importin) beta 1 | 0.0207205 |
| AKAP13 | A kinase (PRKA) anchor protein 13 | 0.0206827 |
| ELF2 | E74-like factor 2 (ets domain transcription factor) | 0.0206818 |
| Symbol | Name | Standardized Value |
|---|---|---|
| LSAMP | limbic system-associated membrane protein | -0.185997 |
| FRMD4A | FERM domain containing 4A | -0.105901 |
| SERPINA3 | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 | -0.105497 |
| NRG3 | neuregulin 3 | -0.0831912 |
| NLGN1 | neuroligin 1 | -0.0813275 |
| MT2A | metallothionein 2A | -0.0486728 |
| IMMP2L | IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) | -0.0450605 |
| TNNC1 | troponin C type 1 (slow) | -0.0441249 |
| CHST11 | carbohydrate (chondroitin 4) sulfotransferase 11 | -0.039049 |
| FN1 | fibronectin 1 | -0.0385657 |
| AKAP12 | A kinase (PRKA) anchor protein 12 | -0.0296091 |
| LEF1 | lymphoid enhancer-binding factor 1 | -0.0240714 |
| CNIH3 | cornichon family AMPA receptor auxiliary protein 3 | -0.0213306 |
| LINC02798 | long intergenic non-protein coding RNA 2798 | -0.0195199 |
| SLC39A11 | solute carrier family 39, member 11 | -0.0187635 |
| ROBO2 | roundabout, axon guidance receptor, homolog 2 (Drosophila) | -0.0183533 |
| BCAS3 | breast carcinoma amplified sequence 3 | -0.018235 |
| HMGA1 | high mobility group AT-hook 1 | -0.0176574 |
| ZBTB20 | zinc finger and BTB domain containing 20 | -0.0172776 |
| HLA-A | major histocompatibility complex, class I, A | -0.0155948 |
| HPSE2 | heparanase 2 (inactive) | -0.0149402 |
| TYR | tyrosinase | -0.0149328 |
| CTSL | cathepsin L | -0.0148015 |
| LDLRAD3 | low density lipoprotein receptor class A domain containing 3 | -0.0147863 |
| AEBP2 | AE binding protein 2 | -0.014145 |
| SERPINE2 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 | -0.0140017 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.0139783 |
| DIP2C | DIP2 disco-interacting protein 2 homolog C (Drosophila) | -0.0137575 |
| MCTP2 | multiple C2 domains, transmembrane 2 | -0.0134279 |
| OSBPL5 | oxysterol binding protein-like 5 | -0.0133603 |
| MEIS2 | Meis homeobox 2 | -0.0132755 |
| ICAM1 | intercellular adhesion molecule 1 | -0.0130375 |
| L3MBTL4 | l(3)mbt-like 4 (Drosophila) | -0.0128805 |
| ARL6IP1 | ADP-ribosylation factor-like 6 interacting protein 1 | -0.0126651 |
| RPTOR | regulatory associated protein of MTOR, complex 1 | -0.0125672 |
| RPL27A | ribosomal protein L27a | -0.0124649 |
| EHBP1 | EH domain binding protein 1 | -0.0121908 |
| RPL23 | ribosomal protein L23 | -0.0121456 |
| DNAH14 | dynein, axonemal, heavy chain 14 | -0.0116325 |
| PMEL | premelanosome protein | -0.0116033 |
| TMSB10 | thymosin beta 10 | -0.0115413 |
| KIAA1549L | KIAA1549-like | -0.0113735 |
| ARPC1B | actin related protein 2/3 complex, subunit 1B, 41kDa | -0.0112093 |
| RNF213 | ring finger protein 213 | -0.0109533 |
| TENM3 | teneurin transmembrane protein 3 | -0.0106865 |
| EXOC4 | exocyst complex component 4 | -0.0106337 |
| ABCA1 | ATP-binding cassette, sub-family A (ABC1), member 1 | -0.0105728 |
| NHSL1 | NHS-like 1 | -0.0104245 |
| RFX3 | regulatory factor X, 3 (influences HLA class II expression) | -0.0103789 |
| EIF1 | eukaryotic translation initiation factor 1 | -0.0103308 |
| ST6GAL1 | ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 | -0.0102511 |
| LRRC23 | leucine rich repeat containing 23 | -0.0101715 |
| SUCLG2 | succinate-CoA ligase, GDP-forming, beta subunit | -0.0101036 |
| PDE10A | phosphodiesterase 10A | -0.0101019 |
| C10ORF90 | chromosome 10 open reading frame 90 | -0.010049 |
| DPP6 | dipeptidyl-peptidase 6 | -0.0100137 |
| RBMS3 | RNA binding motif, single stranded interacting protein 3 | -0.00987252 |
| CPED1 | cadherin-like and PC-esterase domain containing 1 | -0.00983429 |
| RPL31 | ribosomal protein L31 | -0.00975393 |
| HDAC4 | histone deacetylase 4 | -0.00968284 |
| RPS2 | ribosomal protein S2 | -0.00938774 |
| ROBO1 | roundabout, axon guidance receptor, homolog 1 (Drosophila) | -0.0092677 |
| GALNT18 | polypeptide N-acetylgalactosaminyltransferase 18 | -0.0092405 |
| SLC30A9 | solute carrier family 30 (zinc transporter), member 9 | -0.00921045 |
| IGF2 | insulin-like growth factor 2 | -0.00917223 |
| ADAM19 | ADAM metallopeptidase domain 19 | -0.00908028 |
| USP40 | ubiquitin specific peptidase 40 | -0.00897178 |
| CTNNB1 | catenin (cadherin-associated protein), beta 1, 88kDa | -0.0089568 |
| SVIL | supervillin | -0.00895476 |
| PRDM7 | PR domain containing 7 | -0.00892466 |
| FCRLA | Fc receptor-like A | -0.00890221 |
| MT1X | metallothionein 1X | -0.0088186 |
| RPL12 | ribosomal protein L12 | -0.0088141 |
| IGF1R | insulin-like growth factor 1 receptor | -0.00873947 |
| ANGPTL4 | angiopoietin-like 4 | -0.00867638 |
| S100A13 | S100 calcium binding protein A13 | -0.0086756 |
| RPL18 | ribosomal protein L18 | -0.00863229 |
| ZNF717 | zinc finger protein 717 | -0.00857177 |
| ARNT2 | aryl-hydrocarbon receptor nuclear translocator 2 | -0.00855934 |
| DISC1 | disrupted in schizophrenia 1 | -0.00854473 |
| ATP11A | ATPase, class VI, type 11A | -0.00847996 |
| PRG2 | proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) | -0.00834988 |
| MSI2 | musashi RNA-binding protein 2 | -0.00833802 |
| HIPK2 | homeodomain interacting protein kinase 2 | -0.00830738 |
| AFG2A | AFG2 AAA ATPase homolog A | -0.00830402 |
| RPL34 | ribosomal protein L34 | -0.00822227 |
| KCNN2 | potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2 | -0.0082152 |
| CDH13 | cadherin 13 | -0.00816427 |
| ZNF121 | zinc finger protein 121 | -0.00807856 |
| CDIN1 | CDAN1 interacting nuclease 1 | -0.00806344 |
| VEZF1 | vascular endothelial zinc finger 1 | -0.00806249 |
| LOXL2 | lysyl oxidase-like 2 | -0.00800191 |
| NPAS2 | neuronal PAS domain protein 2 | -0.00800059 |
| PHF14 | PHD finger protein 14 | -0.00795276 |
| HIBADH | 3-hydroxyisobutyrate dehydrogenase | -0.00786049 |
| FGF13 | fibroblast growth factor 13 | -0.0078314 |
| RASA3 | RAS p21 protein activator 3 | -0.00776081 |
| KCNQ5 | potassium channel, voltage gated KQT-like subfamily Q, member 5 | -0.00763822 |
| SCFD2 | sec1 family domain containing 2 | -0.00762427 |
| ENTHD1 | ENTH domain containing 1 | -0.00758418 |
