| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Retinoic acid perturbation in SNU-423 cell line (Tahoe Therapeutics) |
| Similar Terms | |
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200 genes differentially expressed following the Retinoic acid_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| TRIO | trio Rho guanine nucleotide exchange factor | 0.160325 |
| KCNMA1 | potassium channel, calcium activated large conductance subfamily M alpha, member 1 | 0.14634 |
| PDE10A | phosphodiesterase 10A | 0.104317 |
| GBE1 | glucan (1,4-alpha-), branching enzyme 1 | 0.0953036 |
| GRIN2A | glutamate receptor, ionotropic, N-methyl D-aspartate 2A | 0.0855236 |
| IGFN1 | immunoglobulin-like and fibronectin type III domain containing 1 | 0.0836901 |
| COL6A3 | collagen, type VI, alpha 3 | 0.08177 |
| NDRG1 | N-myc downstream regulated 1 | 0.0804123 |
| AGAP1 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 | 0.072145 |
| CADM1 | cell adhesion molecule 1 | 0.0709189 |
| NAV2 | neuron navigator 2 | 0.0698048 |
| VCAN | versican | 0.0691098 |
| IQCJ-SCHIP1 | IQCJ-SCHIP1 readthrough | 0.0660051 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 | 0.0656802 |
| IMMP2L | IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) | 0.06566 |
| IGFBP3 | insulin-like growth factor binding protein 3 | 0.0647576 |
| CDH13 | cadherin 13 | 0.0632597 |
| ASPH | aspartate beta-hydroxylase | 0.0618223 |
| MYOF | myoferlin | 0.0607856 |
| MAGI2 | membrane associated guanylate kinase, WW and PDZ domain containing 2 | 0.0588277 |
| FMNL2 | formin-like 2 | 0.055949 |
| HDAC9 | histone deacetylase 9 | 0.0555644 |
| P4HB | prolyl 4-hydroxylase, beta polypeptide | 0.0512351 |
| SEPTIN9 | septin 9 | 0.050676 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | 0.0479665 |
| PRELID2 | PRELI domain containing 2 | 0.0478182 |
| MYH9 | myosin, heavy chain 9, non-muscle | 0.0473978 |
| P4HA1 | prolyl 4-hydroxylase, alpha polypeptide I | 0.0461302 |
| VEGFA | vascular endothelial growth factor A | 0.0457882 |
| FRMPD4 | FERM and PDZ domain containing 4 | 0.0455603 |
| AFF3 | AF4/FMR2 family, member 3 | 0.0455491 |
| MACF1 | microtubule-actin crosslinking factor 1 | 0.0444645 |
| UBA6 | ubiquitin-like modifier activating enzyme 6 | 0.0438345 |
| DLG1 | discs, large homolog 1 (Drosophila) | 0.0437137 |
| ZHX2 | zinc fingers and homeoboxes 2 | 0.0427426 |
| HIVEP2 | human immunodeficiency virus type I enhancer binding protein 2 | 0.041807 |
| HELZ | helicase with zinc finger | 0.0413502 |
| LDHA | lactate dehydrogenase A | 0.0411869 |
| MSN | moesin | 0.0407114 |
| FNIP1 | folliculin interacting protein 1 | 0.0406229 |
| TANC2 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 | 0.0404566 |
| PFKFB4 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 | 0.040361 |
| BACE2 | beta-site APP-cleaving enzyme 2 | 0.0394235 |
| RUNX1 | runt-related transcription factor 1 | 0.039166 |
| SDK1 | sidekick cell adhesion molecule 1 | 0.0391523 |
| STC2 | stanniocalcin 2 | 0.0390921 |
| ENO1 | enolase 1, (alpha) | 0.0390391 |
| COL5A1 | collagen, type V, alpha 1 | 0.0382168 |
| ATXN1 | ataxin 1 | 0.0381272 |
| SQSTM1 | sequestosome 1 | 0.0376597 |
| TNS3 | tensin 3 | 0.0371114 |
| CD109 | CD109 molecule | 0.0360906 |
| ZNF292 | zinc finger protein 292 | 0.0359693 |
| DST | dystonin | 0.0358499 |
| PLOD2 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 | 0.0358094 |
| BNIP3 | BCL2/adenovirus E1B 19kDa interacting protein 3 | 0.0354317 |
| ESYT2 | extended synaptotagmin-like protein 2 | 0.0350823 |
| PKM | pyruvate kinase, muscle | 0.0349806 |
| HILPDA | hypoxia inducible lipid droplet-associated | 0.0348454 |
| RAD51B | RAD51 paralog B | 0.0348338 |
| EFNA5 | ephrin-A5 | 0.0348264 |
| CALR | calreticulin | 0.0346515 |
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 | 0.0345266 |
| MXI1 | MAX interactor 1, dimerization protein | 0.0343659 |
| MMP12 | matrix metallopeptidase 12 | 0.0338662 |
| SMG1 | SMG1 phosphatidylinositol 3-kinase-related kinase | 0.0337178 |
| BBX | bobby sox homolog (Drosophila) | 0.0334761 |
| EPB41L2 | erythrocyte membrane protein band 4.1-like 2 | 0.0334744 |
| WWOX | WW domain containing oxidoreductase | 0.0331624 |
| ADM | adrenomedullin | 0.0331212 |
| RBMS3 | RNA binding motif, single stranded interacting protein 3 | 0.0329826 |
| TIMP2 | TIMP metallopeptidase inhibitor 2 | 0.0329796 |
| APLP2 | amyloid beta (A4) precursor-like protein 2 | 0.032897 |
| EGFR | epidermal growth factor receptor | 0.0327601 |
| FTH1 | ferritin, heavy polypeptide 1 | 0.0326536 |
| DUSP10 | dual specificity phosphatase 10 | 0.03174 |
| ASAP1 | ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 | 0.031191 |
| BNIP3L | BCL2/adenovirus E1B 19kDa interacting protein 3-like | 0.030753 |
| PPARD | peroxisome proliferator-activated receptor delta | 0.0302401 |
| ARFGEF3 | ARFGEF family member 3 | 0.0295937 |
| FNDC3B | fibronectin type III domain containing 3B | 0.0290548 |
| ERO1A | endoplasmic reticulum oxidoreductase 1 alpha | 0.0288658 |
| TTC3 | tetratricopeptide repeat domain 3 | 0.0288595 |
| IARS1 | isoleucyl-tRNA synthetase 1 | 0.0287522 |
| JARID2 | jumonji, AT rich interactive domain 2 | 0.0284883 |
| YEATS2 | YEATS domain containing 2 | 0.0284691 |
| RND3 | Rho family GTPase 3 | 0.0284286 |
| FBXO32 | F-box protein 32 | 0.0282713 |
| EPHA6 | EPH receptor A6 | 0.0282056 |
| PHF21A | PHD finger protein 21A | 0.02817 |
| CEP250 | centrosomal protein 250kDa | 0.0280376 |
| KDM2A | lysine (K)-specific demethylase 2A | 0.0278446 |
| GOLGA4 | golgin A4 | 0.0277414 |
| FRMD4A | FERM domain containing 4A | 0.0276473 |
| TMEM132D | transmembrane protein 132D | 0.0275786 |
| MLPH | melanophilin | 0.0274879 |
| PRKCE | protein kinase C, epsilon | 0.0270765 |
| SLC8A1 | solute carrier family 8 (sodium/calcium exchanger), member 1 | 0.0269632 |
| TNIK | TRAF2 and NCK interacting kinase | 0.026783 |
| PSD3 | pleckstrin and Sec7 domain containing 3 | 0.0267649 |
| Symbol | Name | Standardized Value |
|---|---|---|
| NAMPT | nicotinamide phosphoribosyltransferase | -0.12832 |
| DCBLD2 | discoidin, CUB and LCCL domain containing 2 | -0.123584 |
| VCL | vinculin | -0.115041 |
| VIM | vimentin | -0.110142 |
| HIF1A | hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) | -0.0960139 |
| FN1 | fibronectin 1 | -0.0946779 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.0897943 |
| PHLDB2 | pleckstrin homology-like domain, family B, member 2 | -0.0845478 |
| TMSB10 | thymosin beta 10 | -0.0829696 |
| HLA-B | major histocompatibility complex, class I, B | -0.0828605 |
| MARCKS | myristoylated alanine-rich protein kinase C substrate | -0.0756756 |
| BICC1 | BicC family RNA binding protein 1 | -0.0736706 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.0650574 |
| ITGB1 | integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) | -0.0594998 |
| EIF1 | eukaryotic translation initiation factor 1 | -0.0589309 |
| AKAP12 | A kinase (PRKA) anchor protein 12 | -0.0563107 |
| MT2A | metallothionein 2A | -0.056117 |
| KYNU | kynureninase | -0.0490963 |
| RPL23 | ribosomal protein L23 | -0.0487959 |
| OSMR | oncostatin M receptor | -0.0481823 |
| RPS24 | ribosomal protein S24 | -0.0455807 |
| ABCA1 | ATP-binding cassette, sub-family A (ABC1), member 1 | -0.0447631 |
| ARL6IP1 | ADP-ribosylation factor-like 6 interacting protein 1 | -0.0447473 |
| KLF6 | Kruppel-like factor 6 | -0.0438487 |
| GNAS | GNAS complex locus | -0.0433869 |
| ELL2 | elongation factor, RNA polymerase II, 2 | -0.043355 |
| TOP2A | topoisomerase (DNA) II alpha 170kDa | -0.0432118 |
| NABP1 | nucleic acid binding protein 1 | -0.0427155 |
| ACSL4 | acyl-CoA synthetase long-chain family member 4 | -0.0406936 |
| ATP2B1 | ATPase, Ca++ transporting, plasma membrane 1 | -0.040615 |
| SLC38A2 | solute carrier family 38, member 2 | -0.0403108 |
| EGR1 | early growth response 1 | -0.0401788 |
| THBS1 | thrombospondin 1 | -0.0391179 |
| SDC4 | syndecan 4 | -0.0390375 |
| PNRC1 | proline-rich nuclear receptor coactivator 1 | -0.0385114 |
| PTPN12 | protein tyrosine phosphatase, non-receptor type 12 | -0.0384685 |
| RPL35A | ribosomal protein L35a | -0.0383887 |
| PALLD | palladin, cytoskeletal associated protein | -0.0379061 |
| GLIS3 | GLIS family zinc finger 3 | -0.037375 |
| AHNAK | AHNAK nucleoprotein | -0.0357109 |
| RPS6 | ribosomal protein S6 | -0.0351388 |
| TUBB | tubulin, beta class I | -0.0349322 |
| SCD | stearoyl-CoA desaturase (delta-9-desaturase) | -0.0336767 |
| MKI67 | marker of proliferation Ki-67 | -0.0325484 |
| RPL26 | ribosomal protein L26 | -0.0320446 |
| RTN4 | reticulon 4 | -0.0312714 |
| RPL32 | ribosomal protein L32 | -0.0309526 |
| RPL19 | ribosomal protein L19 | -0.0309235 |
| RPS21 | ribosomal protein S21 | -0.0308823 |
| TMSB4X | thymosin beta 4, X-linked | -0.0307464 |
| RPS4X | ribosomal protein S4, X-linked | -0.0297237 |
| RPL36A | ribosomal protein L36a | -0.0293321 |
| SOD2 | superoxide dismutase 2, mitochondrial | -0.0293029 |
| ANXA2 | annexin A2 | -0.0292916 |
| RPL12 | ribosomal protein L12 | -0.0285763 |
| LOC112694756 | uncharaterized LOC112694756 | -0.0281939 |
| PAPPA | pregnancy-associated plasma protein A, pappalysin 1 | -0.0281627 |
| RPLP1 | ribosomal protein, large, P1 | -0.0280138 |
| P4HA2 | prolyl 4-hydroxylase, alpha polypeptide II | -0.027944 |
| NCOA7 | nuclear receptor coactivator 7 | -0.0278448 |
| STAT1 | signal transducer and activator of transcription 1, 91kDa | -0.0275102 |
| TNNC1 | troponin C type 1 (slow) | -0.0270687 |
| RACK1 | receptor for activated C kinase 1 | -0.0269742 |
| CENPF | centromere protein F, 350/400kDa | -0.0268916 |
| SERINC1 | serine incorporator 1 | -0.0266218 |
| DIAPH3 | diaphanous-related formin 3 | -0.0264253 |
| ARHGAP5 | Rho GTPase activating protein 5 | -0.0264152 |
| ANLN | anillin, actin binding protein | -0.0263145 |
| DENND5A | DENN/MADD domain containing 5A | -0.0259636 |
| KPNB1 | karyopherin (importin) beta 1 | -0.0253468 |
| TMEM41B | transmembrane protein 41B | -0.0250479 |
| UBC | ubiquitin C | -0.0248487 |
| RPL35 | ribosomal protein L35 | -0.0247939 |
| FTL | ferritin, light polypeptide | -0.0246871 |
| BCAR3 | breast cancer anti-estrogen resistance 3 | -0.0240972 |
| RPL34 | ribosomal protein L34 | -0.0238439 |
| RPLP0 | ribosomal protein, large, P0 | -0.0235185 |
| SLC38A1 | solute carrier family 38, member 1 | -0.0235091 |
| ARPC2 | actin related protein 2/3 complex, subunit 2, 34kDa | -0.0234944 |
| TFPI | tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) | -0.0233297 |
| ZNF217 | zinc finger protein 217 | -0.0230387 |
| HDAC8 | histone deacetylase 8 | -0.0229427 |
| VMP1 | vacuole membrane protein 1 | -0.0229135 |
| ACTG1 | actin gamma 1 | -0.0228658 |
| RAD21 | RAD21 homolog (S. pombe) | -0.0226458 |
| CALM2 | calmodulin 2 (phosphorylase kinase, delta) | -0.0224991 |
| KLF7 | Kruppel-like factor 7 (ubiquitous) | -0.0224389 |
| COL1A1 | collagen, type I, alpha 1 | -0.022337 |
| SMURF2 | SMAD specific E3 ubiquitin protein ligase 2 | -0.0220721 |
| BASP1 | brain abundant, membrane attached signal protein 1 | -0.0218696 |
| EHBP1 | EH domain binding protein 1 | -0.0218652 |
| RPL36 | ribosomal protein L36 | -0.0217117 |
| STK17A | serine/threonine kinase 17a | -0.0216784 |
| IL6 | interleukin 6 | -0.0216505 |
| KIF4A | kinesin family member 4A | -0.0216342 |
| COL1A2 | collagen, type I, alpha 2 | -0.0215932 |
| RPLP2 | ribosomal protein, large, P2 | -0.0215635 |
| IFI6 | interferon, alpha-inducible protein 6 | -0.0215279 |
| DCBLD1 | discoidin, CUB and LCCL domain containing 1 | -0.0214348 |
| CAVIN1 | caveolae associated protein 1 | -0.0210133 |
