| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Retinoic acid perturbation in SW 900 cell line (Tahoe Therapeutics) |
| Similar Terms | |
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200 genes differentially expressed following the Retinoic acid_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| HIVEP2 | human immunodeficiency virus type I enhancer binding protein 2 | 0.0714459 |
| KCNMA1 | potassium channel, calcium activated large conductance subfamily M alpha, member 1 | 0.069342 |
| TRIO | trio Rho guanine nucleotide exchange factor | 0.065755 |
| INTS6 | integrator complex subunit 6 | 0.0654899 |
| ZSWIM6 | zinc finger, SWIM-type containing 6 | 0.0621157 |
| EXT1 | exostosin glycosyltransferase 1 | 0.0490641 |
| ENO2 | enolase 2 (gamma, neuronal) | 0.0481409 |
| NRIP1 | nuclear receptor interacting protein 1 | 0.0456104 |
| VCL | vinculin | 0.0404794 |
| P4HB | prolyl 4-hydroxylase, beta polypeptide | 0.0400886 |
| MGAT5 | mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase | 0.0364005 |
| AGAP1 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 | 0.0360205 |
| CTBP2 | C-terminal binding protein 2 | 0.035009 |
| SHB | Src homology 2 domain containing adaptor protein B | 0.0321784 |
| FLNB | filamin B, beta | 0.0315689 |
| GPC6 | glypican 6 | 0.0295407 |
| HERC4 | HECT and RLD domain containing E3 ubiquitin protein ligase 4 | 0.0288961 |
| ABL2 | ABL proto-oncogene 2, non-receptor tyrosine kinase | 0.0288329 |
| RUNX1 | runt-related transcription factor 1 | 0.0287007 |
| GRB10 | growth factor receptor-bound protein 10 | 0.0270273 |
| SEPTIN9 | septin 9 | 0.0264224 |
| PITPNC1 | phosphatidylinositol transfer protein, cytoplasmic 1 | 0.0263201 |
| SMAD3 | SMAD family member 3 | 0.0258605 |
| ASPH | aspartate beta-hydroxylase | 0.0256263 |
| PRELID2 | PRELI domain containing 2 | 0.0250955 |
| ZCCHC7 | zinc finger, CCHC domain containing 7 | 0.0244261 |
| TUFT1 | tuftelin 1 | 0.0241686 |
| PDLIM5 | PDZ and LIM domain 5 | 0.0240036 |
| RAB10 | RAB10, member RAS oncogene family | 0.023998 |
| EGFR | epidermal growth factor receptor | 0.0238582 |
| PTK2 | protein tyrosine kinase 2 | 0.0235404 |
| PICALM | phosphatidylinositol binding clathrin assembly protein | 0.0235292 |
| FMNL2 | formin-like 2 | 0.0235143 |
| SPIRE1 | spire-type actin nucleation factor 1 | 0.0234586 |
| NPAS2 | neuronal PAS domain protein 2 | 0.022868 |
| PALLD | palladin, cytoskeletal associated protein | 0.0224852 |
| CRIM1 | cysteine rich transmembrane BMP regulator 1 (chordin-like) | 0.0224414 |
| NALF1 | NALCN channel auxiliary factor 1 | 0.0220482 |
| PTMA | prothymosin, alpha | 0.0219932 |
| LHFPL2 | lipoma HMGIC fusion partner-like 2 | 0.0219143 |
| NFAT5 | nuclear factor of activated T-cells 5, tonicity-responsive | 0.0210644 |
| WNK1 | WNK lysine deficient protein kinase 1 | 0.0204123 |
| GALNT2 | polypeptide N-acetylgalactosaminyltransferase 2 | 0.0203113 |
| AEBP2 | AE binding protein 2 | 0.0203047 |
| MYO1E | myosin IE | 0.0201881 |
| ATP2B1 | ATPase, Ca++ transporting, plasma membrane 1 | 0.0199614 |
| LRRC23 | leucine rich repeat containing 23 | 0.019893 |
| KDM4C | lysine (K)-specific demethylase 4C | 0.0196764 |
| NR3C1 | nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) | 0.0195707 |
| LOXL2 | lysyl oxidase-like 2 | 0.0193215 |
| VIM | vimentin | 0.0192622 |
| EPAS1 | endothelial PAS domain protein 1 | 0.0192333 |
| VMP1 | vacuole membrane protein 1 | 0.0191252 |
| PPFIBP1 | PTPRF interacting protein, binding protein 1 (liprin beta 1) | 0.0190748 |
| HNRNPH1 | heterogeneous nuclear ribonucleoprotein H1 (H) | 0.0189261 |
| PTPRD | protein tyrosine phosphatase, receptor type, D | 0.0188192 |
| RPL31 | ribosomal protein L31 | 0.018812 |
| SEMA4A | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A | 0.0186268 |
| RPS6 | ribosomal protein S6 | 0.0186167 |
| CNIH3 | cornichon family AMPA receptor auxiliary protein 3 | 0.0185684 |
| NEDD4L | neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase | 0.0185437 |
| WWTR1 | WW domain containing transcription regulator 1 | 0.0184216 |
| MCL1 | myeloid cell leukemia 1 | 0.0182198 |
| FNDC3B | fibronectin type III domain containing 3B | 0.0181443 |
| RPS11 | ribosomal protein S11 | 0.0179241 |
| GLS2 | glutaminase 2 (liver, mitochondrial) | 0.017889 |
| MBNL1 | muscleblind-like splicing regulator 1 | 0.0176742 |
| JAK1 | Janus kinase 1 | 0.0175995 |
| RBFOX2 | RNA binding protein, fox-1 homolog (C. elegans) 2 | 0.0175853 |
| EPS8 | epidermal growth factor receptor pathway substrate 8 | 0.0175722 |
| RAB7A | RAB7A, member RAS oncogene family | 0.0173563 |
| NPTN | neuroplastin | 0.0171339 |
| CUL3 | cullin 3 | 0.0171282 |
| LRRFIP1 | leucine rich repeat (in FLII) interacting protein 1 | 0.0171258 |
| FHIT | fragile histidine triad | 0.0171237 |
| UBR5 | ubiquitin protein ligase E3 component n-recognin 5 | 0.0171153 |
| AGPAT4 | 1-acylglycerol-3-phosphate O-acyltransferase 4 | 0.0170752 |
| CLIP2 | CAP-GLY domain containing linker protein 2 | 0.0170174 |
| AGO2 | argonaute RISC catalytic component 2 | 0.0169047 |
| TBC1D8 | TBC1 domain family, member 8 (with GRAM domain) | 0.0167791 |
| ERC1 | ELKS/RAB6-interacting/CAST family member 1 | 0.0167237 |
| GPATCH2L | G patch domain containing 2-like | 0.0166732 |
| NAV1 | neuron navigator 1 | 0.0166274 |
| CCDC138 | coiled-coil domain containing 138 | 0.0165009 |
| N4BP2L2 | NEDD4 binding protein 2-like 2 | 0.0164389 |
| ATP1B3 | ATPase, Na+/K+ transporting, beta 3 polypeptide | 0.016334 |
| LCOR | ligand dependent nuclear receptor corepressor | 0.0163145 |
| ARIH1 | ariadne RBR E3 ubiquitin protein ligase 1 | 0.0162455 |
| FERMT2 | fermitin family member 2 | 0.0161433 |
| APLP2 | amyloid beta (A4) precursor-like protein 2 | 0.0159268 |
| RPL35A | ribosomal protein L35a | 0.0159214 |
| SMYD3 | SET and MYND domain containing 3 | 0.0158709 |
| NTN4 | netrin 4 | 0.0157426 |
| MLPH | melanophilin | 0.0156464 |
| MACF1 | microtubule-actin crosslinking factor 1 | 0.0155864 |
| RPS29 | ribosomal protein S29 | 0.0154835 |
| GOLGB1 | golgin B1 | 0.0153196 |
| FLNA | filamin A, alpha | 0.0153002 |
| PLEC | plectin | 0.0152619 |
| WARS1 | tryptophanyl-tRNA synthetase 1 | 0.015176 |
| Symbol | Name | Standardized Value |
|---|---|---|
| PTGS2 | prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) | -0.337245 |
| CYP1B1 | cytochrome P450, family 1, subfamily B, polypeptide 1 | -0.271837 |
| FN1 | fibronectin 1 | -0.146944 |
| NAMPT | nicotinamide phosphoribosyltransferase | -0.121687 |
| NRG1 | neuregulin 1 | -0.0975655 |
| TMSB4X | thymosin beta 4, X-linked | -0.0792815 |
| ITGA1 | integrin, alpha 1 | -0.0774212 |
| MT2A | metallothionein 2A | -0.0744245 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.0677591 |
| TMEM156 | transmembrane protein 156 | -0.0648016 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.0639105 |
| CANX | calnexin | -0.0556505 |
| CXCL8 | chemokine (C-X-C motif) ligand 8 | -0.052216 |
| OSMR | oncostatin M receptor | -0.0480008 |
| HMGA2 | high mobility group AT-hook 2 | -0.0452196 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | -0.0450226 |
| IRF2BP2 | interferon regulatory factor 2 binding protein 2 | -0.0446943 |
| KLHL5 | kelch-like family member 5 | -0.0440826 |
| HIF1A | hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) | -0.0436731 |
| S100A6 | S100 calcium binding protein A6 | -0.0414263 |
| HLA-B | major histocompatibility complex, class I, B | -0.0399736 |
| SOX4 | SRY (sex determining region Y)-box 4 | -0.0399036 |
| ARL6IP1 | ADP-ribosylation factor-like 6 interacting protein 1 | -0.0393528 |
| TFPI2 | tissue factor pathway inhibitor 2 | -0.0379035 |
| SQSTM1 | sequestosome 1 | -0.0374231 |
| TXNIP | thioredoxin interacting protein | -0.0354239 |
| ITGA2 | integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) | -0.0339989 |
| AHR | aryl hydrocarbon receptor | -0.0330842 |
| CENPF | centromere protein F, 350/400kDa | -0.0323711 |
| AKAP12 | A kinase (PRKA) anchor protein 12 | -0.0312907 |
| TPR | translocated promoter region, nuclear basket protein | -0.029857 |
| RAD21 | RAD21 homolog (S. pombe) | -0.0287918 |
| ZMYND8 | zinc finger, MYND-type containing 8 | -0.0278703 |
| MKI67 | marker of proliferation Ki-67 | -0.0278537 |
| H1-0 | H1.0 linker histone | -0.0269513 |
| TOP2A | topoisomerase (DNA) II alpha 170kDa | -0.0268075 |
| DUSP6 | dual specificity phosphatase 6 | -0.0265919 |
| RPL26 | ribosomal protein L26 | -0.026371 |
| CALM2 | calmodulin 2 (phosphorylase kinase, delta) | -0.0251392 |
| SOS1 | son of sevenless homolog 1 (Drosophila) | -0.0251049 |
| EREG | epiregulin | -0.0249407 |
| AOPEP | aminopeptidase O (putative) | -0.0249045 |
| SCD | stearoyl-CoA desaturase (delta-9-desaturase) | -0.0247296 |
| ETV6 | ets variant 6 | -0.0246638 |
| TM9SF3 | transmembrane 9 superfamily member 3 | -0.0244773 |
| FNBP1 | formin binding protein 1 | -0.0244764 |
| TPI1 | triosephosphate isomerase 1 | -0.0244206 |
| CALU | calumenin | -0.0240771 |
| TXNRD1 | thioredoxin reductase 1 | -0.0233452 |
| ARID4B | AT rich interactive domain 4B (RBP1-like) | -0.023342 |
| P4HA1 | prolyl 4-hydroxylase, alpha polypeptide I | -0.0232307 |
| ACBD3 | acyl-CoA binding domain containing 3 | -0.0231552 |
| PLOD2 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 | -0.0230481 |
| DDX5 | DEAD (Asp-Glu-Ala-Asp) box helicase 5 | -0.0229713 |
| RUNX2 | runt-related transcription factor 2 | -0.0228072 |
| IFI16 | interferon, gamma-inducible protein 16 | -0.022715 |
| NUCKS1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 | -0.0226779 |
| RRBP1 | ribosome binding protein 1 | -0.0224159 |
| LOC112694756 | uncharaterized LOC112694756 | -0.0223874 |
| HIPK2 | homeodomain interacting protein kinase 2 | -0.0220878 |
| ETV1 | ets variant 1 | -0.022047 |
| BZW1 | basic leucine zipper and W2 domains 1 | -0.0219466 |
| FBXO32 | F-box protein 32 | -0.0214545 |
| ATP1B1 | ATPase, Na+/K+ transporting, beta 1 polypeptide | -0.0214508 |
| ACSL4 | acyl-CoA synthetase long-chain family member 4 | -0.021161 |
| BASP1 | brain abundant, membrane attached signal protein 1 | -0.0210409 |
| CLTC | clathrin, heavy chain (Hc) | -0.0206653 |
| CFB | complement factor B | -0.020604 |
| RGS2 | regulator of G-protein signaling 2 | -0.0200806 |
| FAM20C | family with sequence similarity 20, member C | -0.0199906 |
| ARF1 | ADP-ribosylation factor 1 | -0.0199324 |
| CAB39 | calcium binding protein 39 | -0.0198475 |
| FAF2 | Fas associated factor family member 2 | -0.0198096 |
| PRRC2C | proline-rich coiled-coil 2C | -0.0196781 |
| YME1L1 | YME1-like 1 ATPase | -0.0196258 |
| NPEPPS | aminopeptidase puromycin sensitive | -0.019516 |
| KDM3A | lysine (K)-specific demethylase 3A | -0.0190827 |
| YWHAE | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon | -0.0189732 |
| LCORL | ligand dependent nuclear receptor corepressor-like | -0.0187666 |
| ABCA1 | ATP-binding cassette, sub-family A (ABC1), member 1 | -0.0184559 |
| SERPINE2 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 | -0.0180469 |
| TMEM263 | transmembrane protein 263 | -0.0178448 |
| LOC102724023 | ES1 protein homolog, mitochondrial | -0.01782 |
| ZNF217 | zinc finger protein 217 | -0.0177145 |
| TMEM131 | transmembrane protein 131 | -0.0176549 |
| NRP1 | neuropilin 1 | -0.0176323 |
| MMP13 | matrix metallopeptidase 13 | -0.0176115 |
| MT1X | metallothionein 1X | -0.0173973 |
| WDR45B | WD repeat domain 45B | -0.0172438 |
| GNAS | GNAS complex locus | -0.0172297 |
| PDE4D | phosphodiesterase 4D, cAMP-specific | -0.0170822 |
| MAP3K5 | mitogen-activated protein kinase kinase kinase 5 | -0.0170748 |
| ZFP36L1 | ZFP36 ring finger protein-like 1 | -0.0169917 |
| PLEKHB2 | pleckstrin homology domain containing, family B (evectins) member 2 | -0.01694 |
| CP | ceruloplasmin (ferroxidase) | -0.0169328 |
| NIPBL | Nipped-B homolog (Drosophila) | -0.016745 |
| LOX | lysyl oxidase | -0.0167076 |
| CTNNB1 | catenin (cadherin-associated protein), beta 1, 88kDa | -0.0166035 |
| DNAH5 | dynein, axonemal, heavy chain 5 | -0.0164993 |
| MIS18BP1 | MIS18 binding protein 1 | -0.0164402 |
