| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Retinoic acid perturbation in SW48 cell line (Tahoe Therapeutics) |
| Similar Terms | |
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200 genes differentially expressed following the Retinoic acid_SW48 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| CD36 | CD36 molecule (thrombospondin receptor) | 0.127123 |
| EGFR | epidermal growth factor receptor | 0.102784 |
| IMMP2L | IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) | 0.0780484 |
| SERPINB1 | serpin peptidase inhibitor, clade B (ovalbumin), member 1 | 0.068533 |
| ATXN1 | ataxin 1 | 0.0630038 |
| CCSER1 | coiled-coil serine-rich protein 1 | 0.0567126 |
| SMYD3 | SET and MYND domain containing 3 | 0.040265 |
| FAT1 | FAT atypical cadherin 1 | 0.0395841 |
| FHIT | fragile histidine triad | 0.0371778 |
| CENPF | centromere protein F, 350/400kDa | 0.0367194 |
| KITLG | KIT ligand | 0.0363723 |
| RAD51B | RAD51 paralog B | 0.0353625 |
| RNF43 | ring finger protein 43 | 0.0325219 |
| AXIN2 | axin 2 | 0.0322841 |
| MTUS1 | microtubule associated tumor suppressor 1 | 0.0318695 |
| RALGPS2 | Ral GEF with PH domain and SH3 binding motif 2 | 0.0303017 |
| LAMA4 | laminin, alpha 4 | 0.0301148 |
| NCEH1 | neutral cholesterol ester hydrolase 1 | 0.0297506 |
| MT2A | metallothionein 2A | 0.0282692 |
| AREG | amphiregulin | 0.0282676 |
| SIPA1L1 | signal-induced proliferation-associated 1 like 1 | 0.0281516 |
| OXR1 | oxidation resistance 1 | 0.0280156 |
| ITGA2 | integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) | 0.0275268 |
| MBNL1 | muscleblind-like splicing regulator 1 | 0.0273658 |
| PDE4B | phosphodiesterase 4B, cAMP-specific | 0.0268651 |
| NAALADL2 | N-acetylated alpha-linked acidic dipeptidase-like 2 | 0.0266588 |
| ARL15 | ADP-ribosylation factor-like 15 | 0.0263183 |
| TGFBR2 | transforming growth factor, beta receptor II (70/80kDa) | 0.026035 |
| SPRED2 | sprouty-related, EVH1 domain containing 2 | 0.0251534 |
| MKI67 | marker of proliferation Ki-67 | 0.0250467 |
| TOP2A | topoisomerase (DNA) II alpha 170kDa | 0.0247957 |
| TBC1D5 | TBC1 domain family, member 5 | 0.023842 |
| KIAA0040 | KIAA0040 | 0.0237796 |
| DIAPH3 | diaphanous-related formin 3 | 0.0237404 |
| CTSB | cathepsin B | 0.0236659 |
| SPIDR | scaffolding protein involved in DNA repair | 0.0236356 |
| DPY19L1 | dpy-19-like 1 (C. elegans) | 0.0228157 |
| NR4A2 | nuclear receptor subfamily 4, group A, member 2 | 0.0227827 |
| SLC30A10 | solute carrier family 30, member 10 | 0.0218614 |
| RAPGEF2 | Rap guanine nucleotide exchange factor (GEF) 2 | 0.0217632 |
| CRACD | capping protein inhibiting regulator of actin dynamics | 0.0216553 |
| EVA1C | eva-1 homolog C (C. elegans) | 0.0210855 |
| OSBPL10 | oxysterol binding protein-like 10 | 0.0205101 |
| YAP1 | Yes-associated protein 1 | 0.0203158 |
| GNAT3 | guanine nucleotide binding protein, alpha transducing 3 | 0.0202999 |
| FOXP1 | forkhead box P1 | 0.0195495 |
| EDAR | ectodysplasin A receptor | 0.0195092 |
| ERC1 | ELKS/RAB6-interacting/CAST family member 1 | 0.0194332 |
| PDE4D | phosphodiesterase 4D, cAMP-specific | 0.019393 |
| CPOX | coproporphyrinogen oxidase | 0.019172 |
| SAMD5 | sterile alpha motif domain containing 5 | 0.0190276 |
| PRELID2 | PRELI domain containing 2 | 0.0188157 |
| NFE2L2 | nuclear factor, erythroid 2-like 2 | 0.018693 |
| ZNRF3 | zinc and ring finger 3 | 0.0181584 |
| PRKDC | protein kinase, DNA-activated, catalytic polypeptide | 0.0180029 |
| R3HDM1 | R3H domain containing 1 | 0.0179462 |
| KLF12 | Kruppel-like factor 12 | 0.017827 |
| GNG4 | guanine nucleotide binding protein (G protein), gamma 4 | 0.0178059 |
| SEL1L3 | sel-1 suppressor of lin-12-like 3 (C. elegans) | 0.0176275 |
| USP34 | ubiquitin specific peptidase 34 | 0.0175612 |
| YWHAZ | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta | 0.0174343 |
| DCBLD2 | discoidin, CUB and LCCL domain containing 2 | 0.0165323 |
| NIN | ninein (GSK3B interacting protein) | 0.0164226 |
| VPS13B | vacuolar protein sorting 13 homolog B (yeast) | 0.0160294 |
| PHLDA1 | pleckstrin homology-like domain, family A, member 1 | 0.0159254 |
| BABAM2 | BRISC and BRCA1 A complex member 2 | 0.0158696 |
| TGFB2 | transforming growth factor, beta 2 | 0.0158512 |
| SCFD1 | sec1 family domain containing 1 | 0.015803 |
| RB1CC1 | RB1-inducible coiled-coil 1 | 0.0156705 |
| ZBTB20 | zinc finger and BTB domain containing 20 | 0.0156107 |
| EGLN1 | egl-9 family hypoxia-inducible factor 1 | 0.0155537 |
| KLF6 | Kruppel-like factor 6 | 0.015511 |
| APBB2 | amyloid beta (A4) precursor protein-binding, family B, member 2 | 0.0153354 |
| FBXL4 | F-box and leucine-rich repeat protein 4 | 0.0152102 |
| PARD3B | par-3 family cell polarity regulator beta | 0.0151435 |
| TNS3 | tensin 3 | 0.0149772 |
| UMAD1 | UBAP1-MVB12-associated (UMA) domain containing 1 | 0.0149451 |
| PKP4 | plakophilin 4 | 0.0149091 |
| YBX3 | Y box binding protein 3 | 0.014852 |
| RRM2 | ribonucleotide reductase M2 | 0.0148125 |
| WDPCP | WD repeat containing planar cell polarity effector | 0.0147906 |
| PHF3 | PHD finger protein 3 | 0.0147676 |
| SLCO1B3 | solute carrier organic anion transporter family, member 1B3 | 0.0145038 |
| DDX50 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 | 0.0142486 |
| ARL5B | ADP-ribosylation factor-like 5B | 0.0141655 |
| LPGAT1 | lysophosphatidylglycerol acyltransferase 1 | 0.0140891 |
| MPP2 | membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) | 0.0140435 |
| SYNE2 | spectrin repeat containing, nuclear envelope 2 | 0.0140397 |
| SHTN1 | shootin 1 | 0.0139954 |
| NRIP1 | nuclear receptor interacting protein 1 | 0.0138726 |
| ZHX2 | zinc fingers and homeoboxes 2 | 0.013813 |
| AVL9 | AVL9 homolog (S. cerevisiase) | 0.0137843 |
| ANK3 | ankyrin 3, node of Ranvier (ankyrin G) | 0.0137626 |
| ALCAM | activated leukocyte cell adhesion molecule | 0.0134817 |
| RFFL | ring finger and FYVE-like domain containing E3 ubiquitin protein ligase | 0.0134717 |
| DOCK1 | dedicator of cytokinesis 1 | 0.0134543 |
| FOCAD | focadhesin | 0.0134445 |
| MAP3K5 | mitogen-activated protein kinase kinase kinase 5 | 0.0132914 |
| MACC1 | metastasis associated in colon cancer 1 | 0.0131508 |
| CENPP | centromere protein P | 0.013147 |
| Symbol | Name | Standardized Value |
|---|---|---|
| PTMA | prothymosin, alpha | -0.266555 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | -0.1553 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.105192 |
| RPS27A | ribosomal protein S27a | -0.0935202 |
| IER3 | immediate early response 3 | -0.088584 |
| UBC | ubiquitin C | -0.0835423 |
| RPL35A | ribosomal protein L35a | -0.0771238 |
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 | -0.0769339 |
| ACTG1 | actin gamma 1 | -0.0711921 |
| RPL26 | ribosomal protein L26 | -0.0667077 |
| RPL37A | ribosomal protein L37a | -0.0657644 |
| EEF2 | eukaryotic translation elongation factor 2 | -0.0600546 |
| TMSB10 | thymosin beta 10 | -0.058923 |
| LAMB3 | laminin, beta 3 | -0.0569656 |
| RPL23 | ribosomal protein L23 | -0.0532709 |
| RPS3 | ribosomal protein S3 | -0.0527804 |
| PCBP2 | poly(rC) binding protein 2 | -0.050985 |
| RPS24 | ribosomal protein S24 | -0.0505102 |
| CD55 | CD55 molecule, decay accelerating factor for complement (Cromer blood group) | -0.0499084 |
| VCL | vinculin | -0.0497966 |
| CANX | calnexin | -0.0494935 |
| RPL31 | ribosomal protein L31 | -0.0484697 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.0484061 |
| RPL9 | ribosomal protein L9 | -0.0482978 |
| HDAC2 | histone deacetylase 2 | -0.0482452 |
| RPS8 | ribosomal protein S8 | -0.0478706 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.0471085 |
| PABPC1 | poly(A) binding protein, cytoplasmic 1 | -0.0470773 |
| FRAS1 | Fraser extracellular matrix complex subunit 1 | -0.0455006 |
| EIF1 | eukaryotic translation initiation factor 1 | -0.0452715 |
| RPL34 | ribosomal protein L34 | -0.0452144 |
| LDHA | lactate dehydrogenase A | -0.0443328 |
| HLA-B | major histocompatibility complex, class I, B | -0.044318 |
| S100A6 | S100 calcium binding protein A6 | -0.0440262 |
| RAB1A | RAB1A, member RAS oncogene family | -0.0428848 |
| NDRG1 | N-myc downstream regulated 1 | -0.0408735 |
| SFPQ | splicing factor proline/glutamine-rich | -0.0406924 |
| RPS14 | ribosomal protein S14 | -0.0393262 |
| POLR2A | polymerase (RNA) II (DNA directed) polypeptide A, 220kDa | -0.0392391 |
| NAP1L1 | nucleosome assembly protein 1-like 1 | -0.0379984 |
| RPS25 | ribosomal protein S25 | -0.0363959 |
| ERO1A | endoplasmic reticulum oxidoreductase 1 alpha | -0.036112 |
| IGFBP3 | insulin-like growth factor binding protein 3 | -0.0359256 |
| DSCAM | Down syndrome cell adhesion molecule | -0.0355597 |
| ENO1 | enolase 1, (alpha) | -0.0353584 |
| P4HA1 | prolyl 4-hydroxylase, alpha polypeptide I | -0.0351731 |
| FBXO11 | F-box protein 11 | -0.0350753 |
| CTNNA1 | catenin (cadherin-associated protein), alpha 1, 102kDa | -0.0343144 |
| EEF1G | eukaryotic translation elongation factor 1 gamma | -0.0336341 |
| YWHAE | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon | -0.0334501 |
| RPS17 | ribosomal protein S17 | -0.0333811 |
| PPP2R2A | protein phosphatase 2, regulatory subunit B, alpha | -0.0330752 |
| SETD5 | SET domain containing 5 | -0.0326539 |
| AKAP12 | A kinase (PRKA) anchor protein 12 | -0.0323678 |
| ZNF292 | zinc finger protein 292 | -0.0322885 |
| VIM | vimentin | -0.0320688 |
| NPM1 | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | -0.0318748 |
| HNRNPH1 | heterogeneous nuclear ribonucleoprotein H1 (H) | -0.0314143 |
| TAF1D | TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa | -0.0304794 |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A | -0.0302451 |
| RPS13 | ribosomal protein S13 | -0.0301403 |
| RPS5 | ribosomal protein S5 | -0.0297169 |
| ARL6IP1 | ADP-ribosylation factor-like 6 interacting protein 1 | -0.0295578 |
| RBM39 | RNA binding motif protein 39 | -0.0295302 |
| RPL7A | ribosomal protein L7a | -0.0293389 |
| RPL5 | ribosomal protein L5 | -0.0290247 |
| AHNAK | AHNAK nucleoprotein | -0.0289559 |
| P4HB | prolyl 4-hydroxylase, beta polypeptide | -0.0283748 |
| RPS6KA5 | ribosomal protein S6 kinase, 90kDa, polypeptide 5 | -0.0282189 |
| GARS1 | glycyl-tRNA synthetase 1 | -0.0282045 |
| RACK1 | receptor for activated C kinase 1 | -0.02768 |
| CTNND1 | catenin (cadherin-associated protein), delta 1 | -0.02743 |
| ATP5F1B | ATP synthase F1 subunit beta | -0.0273254 |
| PERP | PERP, TP53 apoptosis effector | -0.0266965 |
| RCOR1 | REST corepressor 1 | -0.0266371 |
| RPL19 | ribosomal protein L19 | -0.0264109 |
| ARIH1 | ariadne RBR E3 ubiquitin protein ligase 1 | -0.0261653 |
| ANKRD17 | ankyrin repeat domain 17 | -0.0261395 |
| ZCCHC7 | zinc finger, CCHC domain containing 7 | -0.0261288 |
| TSC22D2 | TSC22 domain family, member 2 | -0.0256566 |
| RPL28 | ribosomal protein L28 | -0.0255353 |
| TOP1 | topoisomerase (DNA) I | -0.0255058 |
| RHEB | Ras homolog enriched in brain | -0.0252243 |
| GLG1 | golgi glycoprotein 1 | -0.0251568 |
| WSB1 | WD repeat and SOCS box containing 1 | -0.0249027 |
| RPL8 | ribosomal protein L8 | -0.0247855 |
| GNB1 | guanine nucleotide binding protein (G protein), beta polypeptide 1 | -0.0245081 |
| MARK3 | MAP/microtubule affinity-regulating kinase 3 | -0.0244892 |
| ESYT2 | extended synaptotagmin-like protein 2 | -0.0243277 |
| FTL | ferritin, light polypeptide | -0.0240822 |
| KDM3A | lysine (K)-specific demethylase 3A | -0.0235729 |
| ASPH | aspartate beta-hydroxylase | -0.0235148 |
| CNOT1 | CCR4-NOT transcription complex, subunit 1 | -0.0233875 |
| HILPDA | hypoxia inducible lipid droplet-associated | -0.0233721 |
| PDIA6 | protein disulfide isomerase family A, member 6 | -0.0230095 |
| CD9 | CD9 molecule | -0.0221379 |
| DSTN | destrin (actin depolymerizing factor) | -0.0221096 |
| YTHDC1 | YTH domain containing 1 | -0.0220494 |
| RAB6A | RAB6A, member RAS oncogene family | -0.021732 |
| TPM4 | tropomyosin 4 | -0.0216605 |
