Ribociclib_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ribociclib perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ribociclib_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.129186
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.127698
MBNL2 muscleblind-like splicing regulator 2 0.118723
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0733482
BTBD9 BTB (POZ) domain containing 9 0.072962
CANX calnexin 0.0696
AHI1 Abelson helper integration site 1 0.0681652
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0613967
RNF149 ring finger protein 149 0.0493585
PHF3 PHD finger protein 3 0.04925
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0455462
ZMYM2 zinc finger, MYM-type 2 0.0454995
GOLGA4 golgin A4 0.0440604
FNDC3A fibronectin type III domain containing 3A 0.0432101
OGA O-GlcNAcase 0.0428025
GRK3 G protein-coupled receptor kinase 3 0.042003
PARP4 poly (ADP-ribose) polymerase family, member 4 0.041565
SREBF2 sterol regulatory element binding transcription factor 2 0.0397372
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.039354
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.038058
KMT2C lysine (K)-specific methyltransferase 2C 0.0372489
H1-0 H1.0 linker histone 0.0371446
TTC3 tetratricopeptide repeat domain 3 0.0370647
MON2 MON2 homolog (S. cerevisiae) 0.0367582
SEC24D SEC24 family member D 0.0365661
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0352765
FNIP1 folliculin interacting protein 1 0.0352203
MCTP2 multiple C2 domains, transmembrane 2 0.0348898
UBAC2 UBA domain containing 2 0.0347647
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.0344268
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0340199
NPEPPS aminopeptidase puromycin sensitive 0.0338331
YEATS2 YEATS domain containing 2 0.032447
KDM3A lysine (K)-specific demethylase 3A 0.0324292
STARD4 StAR-related lipid transfer (START) domain containing 4 0.0320133
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0314376
PATJ PATJ crumbs cell polarity complex component 0.0308275
AHNAK AHNAK nucleoprotein 0.0305163
NF1 neurofibromin 1 0.0302008
RBM39 RNA binding motif protein 39 0.0299874
SBF2 SET binding factor 2 0.0296431
PTEN phosphatase and tensin homolog 0.0294951
TM9SF2 transmembrane 9 superfamily member 2 0.0292033
RAB1A RAB1A, member RAS oncogene family 0.0287475
HELZ helicase with zinc finger 0.028721
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked 0.0286628
HDLBP high density lipoprotein binding protein 0.0283635
RNF43 ring finger protein 43 0.0283223
ESYT2 extended synaptotagmin-like protein 2 0.0282483
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0281023
FNDC3B fibronectin type III domain containing 3B 0.0279776
RBM26 RNA binding motif protein 26 0.0278725
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0273288
PDIA4 protein disulfide isomerase family A, member 4 0.0268095
ZDHHC20 zinc finger, DHHC-type containing 20 0.0265495
COG6 component of oligomeric golgi complex 6 0.0265494
PRELID2 PRELI domain containing 2 0.0263412
GOLPH3L golgi phosphoprotein 3-like 0.0259244
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.025721
ZBTB20 zinc finger and BTB domain containing 20 0.0256544
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0252965
BIRC6 baculoviral IAP repeat containing 6 0.0252592
DLG1 discs, large homolog 1 (Drosophila) 0.02507
PUM2 pumilio RNA-binding family member 2 0.0248455
METTL15 methyltransferase like 15 0.0246579
COPB2 coatomer protein complex, subunit beta 2 (beta prime) 0.0245688
PRRC1 proline-rich coiled-coil 1 0.0244733
ERP44 endoplasmic reticulum protein 44 0.0243311
DIAPH3 diaphanous-related formin 3 0.0242919
KANSL1 KAT8 regulatory NSL complex subunit 1 0.024257
PPP1R12B protein phosphatase 1, regulatory subunit 12B 0.024141
NIPSNAP2 nipsnap homolog 2 0.0241335
TMEM39A transmembrane protein 39A 0.0239907
ITCH itchy E3 ubiquitin protein ligase 0.0238889
AGR2 anterior gradient 2 0.0237976
TUBGCP3 tubulin, gamma complex associated protein 3 0.0233939
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0233713
USP3 ubiquitin specific peptidase 3 0.0233593
MXI1 MAX interactor 1, dimerization protein 0.0232727
PDIA5 protein disulfide isomerase family A, member 5 0.0232299
ZNF638 zinc finger protein 638 0.0231977
ANKHD1 ankyrin repeat and KH domain containing 1 0.0231895
TRIM2 tripartite motif containing 2 0.0230794
GOLGA2 golgin A2 0.0230785
SLF2 SMC5-SMC6 complex localization factor 2 0.0227689
GRAMD2B GRAM domain containing 2B 0.0227544
NCOR1 nuclear receptor corepressor 1 0.0226158
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0225092
USPL1 ubiquitin specific peptidase like 1 0.0224716
FDPS farnesyl diphosphate synthase 0.0224113
DENND4C DENN/MADD domain containing 4C 0.0223062
SUCO SUN domain containing ossification factor 0.0222528
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) 0.0220559
SFXN1 sideroflexin 1 0.0220467
TAOK1 TAO kinase 1 0.0220209
SPG11 spastic paraplegia 11 (autosomal recessive) 0.021869
AFF1 AF4/FMR2 family, member 1 0.0217471
LMAN1 lectin, mannose-binding, 1 0.0215642
CLTC clathrin, heavy chain (Hc) 0.0214644
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0214406

decreased expression

Symbol Name Standardized Value
B2M beta-2-microglobulin -0.209661
EGR1 early growth response 1 -0.163352
LMO7 LIM domain 7 -0.15761
ANXA2 annexin A2 -0.13561
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.117479
LCN2 lipocalin 2 -0.10534
RNF213 ring finger protein 213 -0.105299
C6ORF132 chromosome 6 open reading frame 132 -0.105237
IFI6 interferon, alpha-inducible protein 6 -0.0956799
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.0941015
AREG amphiregulin -0.09262
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0900016
MYO1E myosin IE -0.086869
INTS6 integrator complex subunit 6 -0.0747331
MX1 MX dynamin-like GTPase 1 -0.0742574
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0733307
EZR ezrin -0.0712567
FTL ferritin, light polypeptide -0.0707203
TJP1 tight junction protein 1 -0.0699971
MX2 MX dynamin-like GTPase 2 -0.0698092
LOC102724023 ES1 protein homolog, mitochondrial -0.0693822
PKM pyruvate kinase, muscle -0.0676587
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0663453
RAB7A RAB7A, member RAS oncogene family -0.0651618
RIGI RNA sensor RIG-I -0.0639508
IFI27 interferon, alpha-inducible protein 27 -0.0638849
EPSTI1 epithelial stromal interaction 1 (breast) -0.0623954
SP100 SP100 nuclear antigen -0.0614283
JUN jun proto-oncogene -0.0607881
VCL vinculin -0.0599657
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0557262
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0536517
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0530499
STS steroid sulfatase (microsomal), isozyme S -0.0527092
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0526566
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0525418
GCLC glutamate-cysteine ligase, catalytic subunit -0.0520371
ITGA6 integrin, alpha 6 -0.0518645
PERP PERP, TP53 apoptosis effector -0.0518004
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0517274
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0510543
MACC1 metastasis associated in colon cancer 1 -0.0510019
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.0509363
ACTG1 actin gamma 1 -0.0499842
VMP1 vacuole membrane protein 1 -0.0490943
MCL1 myeloid cell leukemia 1 -0.0489992
CCNL1 cyclin L1 -0.0486675
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0486399
AKAP13 A kinase (PRKA) anchor protein 13 -0.0479233
EXT1 exostosin glycosyltransferase 1 -0.0474859
MT2A metallothionein 2A -0.047054
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0466149
POTEF POTE ankyrin domain family, member F -0.0460134
ERBIN erbb2 interacting protein -0.0458632
IRF1 interferon regulatory factor 1 -0.0451891
TMSB10 thymosin beta 10 -0.044459
NCKAP5 NCK-associated protein 5 -0.0441592
PLSCR2 phospholipid scramblase 2 -0.0432966
TM4SF19 transmembrane 4 L six family member 19 -0.0426941
EFNB2 ephrin-B2 -0.0418202
FTH1 ferritin, heavy polypeptide 1 -0.0412372
CST3 cystatin C -0.0410466
LOC112694756 uncharaterized LOC112694756 -0.0401952
DIAPH1 diaphanous-related formin 1 -0.0389979
RPL23 ribosomal protein L23 -0.0385214
CLDN4 claudin 4 -0.038317
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0381964
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0381203
SHB Src homology 2 domain containing adaptor protein B -0.037761
IFITM3 interferon induced transmembrane protein 3 -0.0374835
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0374251
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0368339
SLC38A1 solute carrier family 38, member 1 -0.0365026
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0353921
TMC5 transmembrane channel-like 5 -0.0347139
PLSCR1 phospholipid scramblase 1 -0.0344987
NABP1 nucleic acid binding protein 1 -0.0341613
STK24 serine/threonine kinase 24 -0.0339528
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0337638
RPL35A ribosomal protein L35a -0.0333484
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0330074
MCTP1 multiple C2 domains, transmembrane 1 -0.032892
CATSPERB catsper channel auxiliary subunit beta -0.0328481
SMAD3 SMAD family member 3 -0.0325927
TSC22D1 TSC22 domain family, member 1 -0.0324782
RPLP1 ribosomal protein, large, P1 -0.0322114
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0322113
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0318729
HLA-B major histocompatibility complex, class I, B -0.0313575
POU2F2 POU class 2 homeobox 2 -0.0309049
TPI1 triosephosphate isomerase 1 -0.0307403
IRS2 insulin receptor substrate 2 -0.0306097
RPS19 ribosomal protein S19 -0.0306037
ZNFX1 zinc finger, NFX1-type containing 1 -0.0305776
BCL2L1 BCL2-like 1 -0.0304807
RPL31 ribosomal protein L31 -0.0301029
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0300838
ARHGAP26 Rho GTPase activating protein 26 -0.0300733
TM4SF1 transmembrane 4 L six family member 1 -0.0300421
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0297116