Ribociclib_NCI-H1792 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ribociclib perturbation in NCI-H1792 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ribociclib_NCI-H1792 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.151768
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.13965
FAM13A family with sequence similarity 13, member A 0.12703
RICTOR RPTOR independent companion of MTOR, complex 2 0.102593
VIM vimentin 0.0980923
PTMA prothymosin, alpha 0.0878292
GRB10 growth factor receptor-bound protein 10 0.0846596
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0842071
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0787016
KDM3A lysine (K)-specific demethylase 3A 0.0769303
DLG1 discs, large homolog 1 (Drosophila) 0.0692378
NGLY1 N-glycanase 1 0.0691506
OGA O-GlcNAcase 0.0678503
USP3 ubiquitin specific peptidase 3 0.0672126
WAC WW domain containing adaptor with coiled-coil 0.062388
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0602045
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0589716
NAP1L1 nucleosome assembly protein 1-like 1 0.0574004
KDM2A lysine (K)-specific demethylase 2A 0.0571395
ATP13A3 ATPase type 13A3 0.0562387
NPEPPS aminopeptidase puromycin sensitive 0.0560961
UBA6 ubiquitin-like modifier activating enzyme 6 0.0542803
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0528583
AP3S1 adaptor-related protein complex 3, sigma 1 subunit 0.0528532
RNF145 ring finger protein 145 0.0515604
ANKRD11 ankyrin repeat domain 11 0.0515107
TRIO trio Rho guanine nucleotide exchange factor 0.0506069
NAMPT nicotinamide phosphoribosyltransferase 0.0501586
KMT2C lysine (K)-specific methyltransferase 2C 0.0500126
WDR45B WD repeat domain 45B 0.0496629
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0472991
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0468218
ITCH itchy E3 ubiquitin protein ligase 0.0460051
IGFBP3 insulin-like growth factor binding protein 3 0.044544
TENT5A terminal nucleotidyltransferase 5A 0.0444616
EPS8 epidermal growth factor receptor pathway substrate 8 0.0443711
HILPDA hypoxia inducible lipid droplet-associated 0.0431175
GARS1 glycyl-tRNA synthetase 1 0.0427709
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0426187
CD109 CD109 molecule 0.0421237
SPAG9 sperm associated antigen 9 0.0419569
KCTD9 potassium channel tetramerization domain containing 9 0.0419493
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0418777
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0415682
RIOK3 RIO kinase 3 0.04117
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0408593
HELZ helicase with zinc finger 0.0408377
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0408329
STRN3 striatin, calmodulin binding protein 3 0.0405826
MARK3 MAP/microtubule affinity-regulating kinase 3 0.040078
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0392631
COG5 component of oligomeric golgi complex 5 0.0392352
PARP8 poly (ADP-ribose) polymerase family, member 8 0.039155
CNOT2 CCR4-NOT transcription complex, subunit 2 0.038711
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0379349
NUP58 nucleoporin 58 0.0373922
RPL35A ribosomal protein L35a 0.0366194
CDC73 cell division cycle 73 0.0362728
ZFAND3 zinc finger, AN1-type domain 3 0.0357938
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.035711
CALR calreticulin 0.0356312
PNISR PNN-interacting serine/arginine-rich protein 0.0352829
CLEC1B C-type lectin domain family 1, member B 0.0352812
PDPK1 3-phosphoinositide dependent protein kinase 1 0.0352583
EEF2 eukaryotic translation elongation factor 2 0.0344766
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.034053
RPS8 ribosomal protein S8 0.0340528
RPL23 ribosomal protein L23 0.0337717
ESYT2 extended synaptotagmin-like protein 2 0.0337516
KPNB1 karyopherin (importin) beta 1 0.0333885
GNAS GNAS complex locus 0.0333767
ZNF207 zinc finger protein 207 0.0332072
RPS24 ribosomal protein S24 0.0331723
MXI1 MAX interactor 1, dimerization protein 0.0329661
RPS12 ribosomal protein S12 0.0329348
CXCL8 chemokine (C-X-C motif) ligand 8 0.0328349
PDGFA platelet-derived growth factor alpha polypeptide 0.0326185
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0326138
KLHL24 kelch-like family member 24 0.032285
WSB1 WD repeat and SOCS box containing 1 0.0322042
MARCHF6 membrane associated ring-CH-type finger 6 0.0320832
RAB21 RAB21, member RAS oncogene family 0.0318259
RPS25 ribosomal protein S25 0.031649
ARHGAP12 Rho GTPase activating protein 12 0.031609
SETD5 SET domain containing 5 0.030864
MEF2A myocyte enhancer factor 2A 0.0308496
PIK3C3 phosphatidylinositol 3-kinase, catalytic subunit type 3 0.0308092
RPLP1 ribosomal protein, large, P1 0.0307563
RAB6A RAB6A, member RAS oncogene family 0.0305309
COPA coatomer protein complex, subunit alpha 0.0301831
RPL37A ribosomal protein L37a 0.0300097
FN1 fibronectin 1 0.0298464
KCMF1 potassium channel modulatory factor 1 0.0297443
EIF3B eukaryotic translation initiation factor 3, subunit B 0.0291495
FAM162A family with sequence similarity 162, member A 0.0289597
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0288438
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 0.028809
MATR3 matrin 3 0.0288015
IER3 immediate early response 3 0.0285359
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0285277

decreased expression

Symbol Name Standardized Value
CD44 CD44 molecule (Indian blood group) -0.186236
PDE4D phosphodiesterase 4D, cAMP-specific -0.151465
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.129303
AKAP12 A kinase (PRKA) anchor protein 12 -0.098566
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0982411
FNDC3B fibronectin type III domain containing 3B -0.0881912
EFNA5 ephrin-A5 -0.0833746
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0829244
MT2A metallothionein 2A -0.0790804
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0738203
SMAD3 SMAD family member 3 -0.0695085
PALM2AKAP2 PALM2 and AKAP2 fusion -0.068098
TGM2 transglutaminase 2 -0.0659536
RAD51B RAD51 paralog B -0.0654528
ANTXR2 anthrax toxin receptor 2 -0.0644978
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0642811
CAMK1D calcium/calmodulin-dependent protein kinase ID -0.0618981
EGFR epidermal growth factor receptor -0.059979
GFPT2 glutamine-fructose-6-phosphate transaminase 2 -0.0585498
DST dystonin -0.0581534
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0575417
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0569265
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0554443
AKAP13 A kinase (PRKA) anchor protein 13 -0.0524257
GLCCI1 glucocorticoid induced 1 -0.0486255
ARHGAP5 Rho GTPase activating protein 5 -0.0476872
MACF1 microtubule-actin crosslinking factor 1 -0.046896
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0468713
SAMD9 sterile alpha motif domain containing 9 -0.0441095
OSMR oncostatin M receptor -0.0433869
ZBTB20 zinc finger and BTB domain containing 20 -0.0429268
HDLBP high density lipoprotein binding protein -0.042062
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0419834
ZC3H12C zinc finger CCCH-type containing 12C -0.0413285
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0413251
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0413008
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0411357
ATXN1 ataxin 1 -0.0410743
LTBP1 latent transforming growth factor beta binding protein 1 -0.0409125
NRG1 neuregulin 1 -0.039227
MYC v-myc avian myelocytomatosis viral oncogene homolog -0.0387999
NPC1 Niemann-Pick disease, type C1 -0.038671
MAML3 mastermind-like 3 (Drosophila) -0.0382939
TFPI2 tissue factor pathway inhibitor 2 -0.037874
MCL1 myeloid cell leukemia 1 -0.036741
LRMDA leucine rich melanocyte differentiation associated -0.0367181
USP34 ubiquitin specific peptidase 34 -0.0354335
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0351018
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0348899
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.034724
KSR1 kinase suppressor of ras 1 -0.034667
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.034636
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0343668
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0341544
ETV6 ets variant 6 -0.0340882
GRIK5 glutamate receptor, ionotropic, kainate 5 -0.0340347
SEPTIN9 septin 9 -0.0338174
ANKRD28 ankyrin repeat domain 28 -0.033772
MSN moesin -0.0333828
MYH9 myosin, heavy chain 9, non-muscle -0.0331608
NTN4 netrin 4 -0.0330468
CDH13 cadherin 13 -0.0328933
PSD3 pleckstrin and Sec7 domain containing 3 -0.0328881
FRMD4A FERM domain containing 4A -0.0328059
LOX lysyl oxidase -0.0327055
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0323585
EXOC4 exocyst complex component 4 -0.0320958
MAN2A1 mannosidase, alpha, class 2A, member 1 -0.0320235
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.0319174
SOD2 superoxide dismutase 2, mitochondrial -0.0318993
ZBTB38 zinc finger and BTB domain containing 38 -0.03176
RAB27B RAB27B, member RAS oncogene family -0.03158
NRP1 neuropilin 1 -0.0312468
DPYD dihydropyrimidine dehydrogenase -0.0310618
SPRED1 sprouty-related, EVH1 domain containing 1 -0.0308466
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0307935
MAML2 mastermind-like 2 (Drosophila) -0.0306068
TTC28 tetratricopeptide repeat domain 28 -0.0301592
KYNU kynureninase -0.0301402
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.030022
HEG1 heart development protein with EGF-like domains 1 -0.029644
SAMD4A sterile alpha motif domain containing 4A -0.0295289
MTSS1 metastasis suppressor 1 -0.0292024
ECE1 endothelin converting enzyme 1 -0.0290675
STK38L serine/threonine kinase 38 like -0.0288356
GOLGB1 golgin B1 -0.0287818
MSRB3 methionine sulfoxide reductase B3 -0.0287655
IL6ST interleukin 6 signal transducer -0.0286033
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0284592
GPC6 glypican 6 -0.0280704
DUSP5 dual specificity phosphatase 5 -0.0275132
HDAC9 histone deacetylase 9 -0.0273047
MYO10 myosin X -0.027254
CANX calnexin -0.026956
TNNC1 troponin C type 1 (slow) -0.0269019
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0266763
GLIS3 GLIS family zinc finger 3 -0.0256857
IFI16 interferon, gamma-inducible protein 16 -0.0254842
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0254666
EGR1 early growth response 1 -0.025426