Rifaximin Gene Set

Dataset DeepCoverMOA Drug Mechanisms of Action
Category proteomics
Type drug perturbation
External Link https://pubchem.ncbi.nlm.nih.gov/compound/6436173
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Genes

198 proteins with high or low expression in Rifaximin relative to other proteins from the DeepCoverMOA Drug Mechanisms of Action dataset.

high expression

Symbol Name Standardized Value
ABHD4 abhydrolase domain containing 4 0.79
RBM20 RNA binding motif protein 20 0.71
PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha 0.59
SPIN4 spindlin family, member 4 0.57
HYLS1 hydrolethalus syndrome 1 0.54
PACRGL PARK2 co-regulated-like 0.53
ADCY9 adenylate cyclase 9 0.49
PLSCR3 phospholipid scramblase 3 0.46
CBLL1 Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase 0.46
RNF13 ring finger protein 13 0.44
BORCS5 BLOC-1 related complex subunit 5 0.43
TFAP2E transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon) 0.42
ARMC7 armadillo repeat containing 7 0.4
ZNF594 zinc finger protein 594 0.39
TRIM37 tripartite motif containing 37 0.38
ALKBH7 alkB, alkylation repair homolog 7 (E. coli) 0.38
NFKBIE nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon 0.38
PLD6 phospholipase D family, member 6 0.38
STK17B serine/threonine kinase 17b 0.37
RCAN1 regulator of calcineurin 1 0.37
YBX3 Y box binding protein 3 0.36
ZNF320 zinc finger protein 320 0.35
SGSH N-sulfoglucosamine sulfohydrolase 0.35
MTSS2 MTSS I-BAR domain containing 2 0.35
S100A2 S100 calcium binding protein A2 0.34
MAST3 microtubule associated serine/threonine kinase 3 0.33
SLC19A2 solute carrier family 19 (thiamine transporter), member 2 0.33
TATDN2 TatD DNase domain containing 2 0.33
KAT5 K(lysine) acetyltransferase 5 0.33
MYT1 myelin transcription factor 1 0.33
ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 0.33
REV1 REV1, polymerase (DNA directed) 0.32
ZNF362 zinc finger protein 362 0.31
TSPAN33 tetraspanin 33 0.3
SPRED1 sprouty-related, EVH1 domain containing 1 0.29
PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 0.29
ACD adrenocortical dysplasia homolog (mouse) 0.28
COQ4 coenzyme Q4 0.28
PHF1 PHD finger protein 1 0.28
SLC39A7 solute carrier family 39 (zinc transporter), member 7 0.28
ANKRD39 ankyrin repeat domain 39 0.28
RTEL1 regulator of telomere elongation helicase 1 0.28
WSB1 WD repeat and SOCS box containing 1 0.27
DCLRE1C DNA cross-link repair 1C 0.27
RNF26 ring finger protein 26 0.27
BTBD7 BTB (POZ) domain containing 7 0.27
ADIPOR1 adiponectin receptor 1 0.27
ZFP37 ZFP37 zinc finger protein 0.27
APBB1 amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) 0.27
IP6K2 inositol hexakisphosphate kinase 2 0.27
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy 0.27
SERPINB8 serpin peptidase inhibitor, clade B (ovalbumin), member 8 0.27
TP73 tumor protein p73 0.26
MSX1 msh homeobox 1 0.26
GPBP1 GC-rich promoter binding protein 1 0.26
KDM4C lysine (K)-specific demethylase 4C 0.26
COMMD8 COMM domain containing 8 0.26
NKAPD1 NKAP domain containing 1 0.26
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 0.25
ZDHHC3 zinc finger, DHHC-type containing 3 0.25
PIH1D1 PIH1 domain containing 1 0.25
DLG1 discs, large homolog 1 (Drosophila) 0.25
DESI2 desumoylating isopeptidase 2 0.25
KLF10 Kruppel-like factor 10 0.25
ENC1 ectodermal-neural cortex 1 (with BTB domain) 0.25
UBE2C ubiquitin-conjugating enzyme E2C 0.25
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.25
RASSF2 Ras association (RalGDS/AF-6) domain family member 2 0.25
MCRIP2 MAPK regulated corepressor interacting protein 2 0.24
USP48 ubiquitin specific peptidase 48 0.24
SNIP1 Smad nuclear interacting protein 1 0.24
TMEM9 transmembrane protein 9 0.24
SPTA1 spectrin, alpha, erythrocytic 1 0.24
RGS12 regulator of G-protein signaling 12 0.24
SYTL3 synaptotagmin-like 3 0.24
CCDC138 coiled-coil domain containing 138 0.24
CEP152 centrosomal protein 152kDa 0.24
COMMD3 COMM domain containing 3 0.23
NABP1 nucleic acid binding protein 1 0.23
SNTA1 syntrophin, alpha 1 0.23
CCDC117 coiled-coil domain containing 117 0.23
ELOB elongin B 0.23
C7 complement component 7 0.23
NFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 0.23
ZFAND5 zinc finger, AN1-type domain 5 0.23
LINS1 lines homolog 1 0.23
GREB1 growth regulation by estrogen in breast cancer 1 0.23
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.23
ARL5B ADP-ribosylation factor-like 5B 0.22
SP100 SP100 nuclear antigen 0.22
PPFIA3 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 0.22
KDM3A lysine (K)-specific demethylase 3A 0.22
PPP1R15B protein phosphatase 1, regulatory subunit 15B 0.22
PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 0.22
METTL6 methyltransferase like 6 0.22
AURKAIP1 aurora kinase A interacting protein 1 0.22
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 0.21
ARHGAP42 Rho GTPase activating protein 42 0.21
ADGRV1 adhesion G protein-coupled receptor V1 0.21

low expression

Symbol Name Standardized Value
LMOD1 leiomodin 1 (smooth muscle) -1.36
FGA fibrinogen alpha chain -1.06
FN1 fibronectin 1 -1.0
GGACT gamma-glutamylamine cyclotransferase -0.72
VWA5B2 von Willebrand factor A domain containing 5B2 -0.69
DUS4L dihydrouridine synthase 4-like (S. cerevisiae) -0.66
NDFIP1 Nedd4 family interacting protein 1 -0.62
ZNF689 zinc finger protein 689 -0.62
GRAMD4 GRAM domain containing 4 -0.51
ZNF267 zinc finger protein 267 -0.47
WDR25 WD repeat domain 25 -0.46
MT-ATP6 ATP synthase F0 subunit 6 -0.45
ZNF714 zinc finger protein 714 -0.45
ZNF532 zinc finger protein 532 -0.45
DAP death-associated protein -0.43
PNPO pyridoxamine 5'-phosphate oxidase -0.42
CCDC110 coiled-coil domain containing 110 -0.42
TCTN1 tectonic family member 1 -0.41
RUNX3 runt-related transcription factor 3 -0.4
TMEM59 transmembrane protein 59 -0.4
TNFRSF12A tumor necrosis factor receptor superfamily, member 12A -0.4
ADGRE2 adhesion G protein-coupled receptor E2 -0.4
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma -0.4
ITGA1 integrin, alpha 1 -0.38
NOL12 nucleolar protein 12 -0.38
BCAM basal cell adhesion molecule (Lutheran blood group) -0.38
CMC1 C-x(9)-C motif containing 1 -0.37
PLGRKT plasminogen receptor, C-terminal lysine transmembrane protein -0.37
PSMB9 proteasome (prosome, macropain) subunit, beta type, 9 -0.37
RNFT2 ring finger protein, transmembrane 2 -0.36
ATXN7L3B ataxin 7-like 3B -0.36
CCDC32 coiled-coil domain containing 32 -0.36
NEU3 sialidase 3 (membrane sialidase) -0.36
JAGN1 jagunal homolog 1 (Drosophila) -0.36
GJB3 gap junction protein, beta 3, 31kDa -0.36
LMLN leishmanolysin-like (metallopeptidase M8 family) -0.35
ADPRH ADP-ribosylarginine hydrolase -0.35
TANK TRAF family member-associated NFKB activator -0.35
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.35
ROR1 receptor tyrosine kinase-like orphan receptor 1 -0.35
INPP5J inositol polyphosphate-5-phosphatase J -0.35
MRPS14 mitochondrial ribosomal protein S14 -0.35
RAP1B RAP1B, member of RAS oncogene family -0.34
SUCO SUN domain containing ossification factor -0.34
ZBTB41 zinc finger and BTB domain containing 41 -0.34
RNF167 ring finger protein 167 -0.34
ZNF623 zinc finger protein 623 -0.34
HBA1 hemoglobin, alpha 1 -0.34
DEPTOR DEP domain containing MTOR-interacting protein -0.33
SYNE3 spectrin repeat containing, nuclear envelope family member 3 -0.33
TMEM102 transmembrane protein 102 -0.32
FAM133A family with sequence similarity 133, member A -0.32
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 -0.32
ZNF672 zinc finger protein 672 -0.32
TRNP1 TMF1-regulated nuclear protein 1 -0.32
FRK fyn-related Src family tyrosine kinase -0.32
NDUFA8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa -0.32
PUS10 pseudouridylate synthase 10 -0.32
ATP5IF1 ATP synthase inhibitory factor subunit 1 -0.32
SLC35A5 solute carrier family 35, member A5 -0.31
ZNF276 zinc finger protein 276 -0.31
CCDC82 coiled-coil domain containing 82 -0.31
AXL AXL receptor tyrosine kinase -0.31
PLEKHH1 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 -0.31
LRP11 low density lipoprotein receptor-related protein 11 -0.31
ITGA7 integrin, alpha 7 -0.31
MSH5 mutS homolog 5 -0.3
VSIR V-set immunoregulatory receptor -0.3
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 -0.3
SMAP1 small ArfGAP 1 -0.3
RCN1 reticulocalbin 1, EF-hand calcium binding domain -0.3
CCDC158 coiled-coil domain containing 158 -0.3
LAPTM4A lysosomal protein transmembrane 4 alpha -0.3
NCKAP1L NCK-associated protein 1-like -0.3
DENND5A DENN/MADD domain containing 5A -0.3
ZNF335 zinc finger protein 335 -0.3
HDDC3 HD domain containing 3 -0.3
ARPP19 cAMP-regulated phosphoprotein, 19kDa -0.29
JRK Jrk homolog (mouse) -0.29
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.29
F13A1 coagulation factor XIII, A1 polypeptide -0.29
C12ORF57 chromosome 12 open reading frame 57 -0.29
GCDH glutaryl-CoA dehydrogenase -0.29
ZNF282 zinc finger protein 282 -0.29
REPIN1 replication initiator 1 -0.29
TOMM5 translocase of outer mitochondrial membrane 5 homolog (yeast) -0.28
FBXL8 F-box and leucine-rich repeat protein 8 -0.28
ABLIM2 actin binding LIM protein family, member 2 -0.28
KSR1 kinase suppressor of ras 1 -0.28
PEX26 peroxisomal biogenesis factor 26 -0.28
DNAH14 dynein, axonemal, heavy chain 14 -0.28
TCOF1 Treacher Collins-Franceschetti syndrome 1 -0.28
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) -0.28
ZNF264 zinc finger protein 264 -0.28
APOE apolipoprotein E -0.27
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.27
CMTM6 CKLF-like MARVEL transmembrane domain containing 6 -0.27
CKM creatine kinase, muscle -0.27
ACTR1B ARP1 actin-related protein 1 homolog B, centractin beta (yeast) -0.27