Riluzole hydrochloride_CFPAC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Riluzole hydrochloride perturbation in CFPAC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Riluzole hydrochloride_CFPAC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
APOL1 apolipoprotein L, 1 0.269358
B2M beta-2-microglobulin 0.136048
MYH9 myosin, heavy chain 9, non-muscle 0.135122
LOC112694756 uncharaterized LOC112694756 0.101014
TNIP1 TNFAIP3 interacting protein 1 0.0991032
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0956311
APOL2 apolipoprotein L, 2 0.0919742
HLA-C major histocompatibility complex, class I, C 0.087294
DST dystonin 0.0821464
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 0.0723908
TMSB4X thymosin beta 4, X-linked 0.0712395
ANXA11 annexin A11 0.0703868
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0696402
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0671869
MUC4 mucin 4, cell surface associated 0.066798
IFI27 interferon, alpha-inducible protein 27 0.0659659
AHNAK2 AHNAK nucleoprotein 2 0.0644227
TGM2 transglutaminase 2 0.0641575
KRT8 keratin 8, type II 0.0637102
BCL2L1 BCL2-like 1 0.0604295
APP amyloid beta (A4) precursor protein 0.0595568
FTH1 ferritin, heavy polypeptide 1 0.0595557
HLA-B major histocompatibility complex, class I, B 0.0573383
BICC1 BicC family RNA binding protein 1 0.0533425
CTNND1 catenin (cadherin-associated protein), delta 1 0.0520823
RNF213 ring finger protein 213 0.0516028
HLA-A major histocompatibility complex, class I, A 0.0511431
ARHGAP5 Rho GTPase activating protein 5 0.0501313
IGFBP3 insulin-like growth factor binding protein 3 0.049852
APLP2 amyloid beta (A4) precursor-like protein 2 0.0496428
PLAU plasminogen activator, urokinase 0.0489475
PGK1 phosphoglycerate kinase 1 0.0480574
CD2AP CD2-associated protein 0.0477248
LCN2 lipocalin 2 0.0472886
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.047145
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0457208
NUMA1 nuclear mitotic apparatus protein 1 0.0452264
CALR calreticulin 0.0450411
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0444157
MACC1 metastasis associated in colon cancer 1 0.04248
HLA-E major histocompatibility complex, class I, E 0.0419804
NONO non-POU domain containing, octamer-binding 0.0405683
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0402878
KRT18 keratin 18, type I 0.0399525
FAM3C family with sequence similarity 3, member C 0.0388148
EEF2 eukaryotic translation elongation factor 2 0.038752
NFE2L1 nuclear factor, erythroid 2-like 1 0.0386009
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.0382695
HRNR hornerin 0.0370952
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.037002
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0361472
PDIA4 protein disulfide isomerase family A, member 4 0.0348317
ACIN1 apoptotic chromatin condensation inducer 1 0.0346543
LDHA lactate dehydrogenase A 0.0341682
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.033731
LAMB3 laminin, beta 3 0.0334871
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0324989
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0323615
CFB complement factor B 0.0313837
SMAD3 SMAD family member 3 0.0313423
CD47 CD47 molecule 0.0312448
CEP250 centrosomal protein 250kDa 0.031021
PLEC plectin 0.0305282
SDC4 syndecan 4 0.0304418
PDZD8 PDZ domain containing 8 0.0297851
SLC35F5 solute carrier family 35, member F5 0.0296379
OSMR oncostatin M receptor 0.0295509
TMEM51 transmembrane protein 51 0.028004
JUP junction plakoglobin 0.0278973
SRRM2 serine/arginine repetitive matrix 2 0.0277738
SEL1L sel-1 suppressor of lin-12-like (C. elegans) 0.0277372
NCEH1 neutral cholesterol ester hydrolase 1 0.0276812
ADGRF1 adhesion G protein-coupled receptor F1 0.0276742
SFTPA2 surfactant protein A2 0.0276025
RLIM ring finger protein, LIM domain interacting 0.0274868
LAMC2 laminin, gamma 2 0.0274548
CALCOCO2 calcium binding and coiled-coil domain 2 0.0274234
ZNF185 zinc finger protein 185 (LIM domain) 0.02734
MX2 MX dynamin-like GTPase 2 0.0269481
ACTN1 actinin, alpha 1 0.0268671
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.026786
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0259181
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0257972
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 0.0257761
PHF3 PHD finger protein 3 0.0257222
KRT19 keratin 19, type I 0.0257167
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0256399
FMN1 formin 1 0.0253865
SQOR sulfide quinone oxidoreductase 0.0251921
IGF1R insulin-like growth factor 1 receptor 0.0250285
KLF3 Kruppel-like factor 3 (basic) 0.0250049
CNOT12 CCR4-NOT transcription complex subunit 12 0.0249503
IFI6 interferon, alpha-inducible protein 6 0.0247256
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0245407
NRP1 neuropilin 1 0.0242707
SPINT1 serine peptidase inhibitor, Kunitz type 1 0.024254
RPL3 ribosomal protein L3 0.0242249
FOXP1 forkhead box P1 0.0242038
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0240648
PUM1 pumilio RNA-binding family member 1 0.0238337

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.21979
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.145301
MT2A metallothionein 2A -0.136884
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.129472
HMGA1 high mobility group AT-hook 1 -0.0975208
DTNA dystrobrevin, alpha -0.0838815
NDRG1 N-myc downstream regulated 1 -0.0775937
POTEF POTE ankyrin domain family, member F -0.0754713
GRB10 growth factor receptor-bound protein 10 -0.0750923
PTMA prothymosin, alpha -0.0673425
EIF1 eukaryotic translation initiation factor 1 -0.0641859
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0622358
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0563659
VIM vimentin -0.056046
RAB1A RAB1A, member RAS oncogene family -0.0557561
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0542382
ACTG1 actin gamma 1 -0.0534467
UBC ubiquitin C -0.0515185
GNAS GNAS complex locus -0.0514299
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0481932
IER3 immediate early response 3 -0.0467918
RBM39 RNA binding motif protein 39 -0.0466211
RCOR1 REST corepressor 1 -0.0465824
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0465601
TM4SF1 transmembrane 4 L six family member 1 -0.0463084
MEF2A myocyte enhancer factor 2A -0.0445664
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0434518
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0427077
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0426796
S100A10 S100 calcium binding protein A10 -0.0420319
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0417696
PDIA3 protein disulfide isomerase family A, member 3 -0.0413647
SPAG9 sperm associated antigen 9 -0.0405549
NABP1 nucleic acid binding protein 1 -0.0405367
KDM5B lysine (K)-specific demethylase 5B -0.0401114
RAB7A RAB7A, member RAS oncogene family -0.039997
RPLP1 ribosomal protein, large, P1 -0.0399672
PARD3 par-3 family cell polarity regulator -0.0396527
ADAM28 ADAM metallopeptidase domain 28 -0.0394771
RPS6 ribosomal protein S6 -0.0393457
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0392223
AKAP12 A kinase (PRKA) anchor protein 12 -0.0381236
SEC24A SEC24 family member A -0.0377612
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0377164
SEC31A SEC31 homolog A (S. cerevisiae) -0.0371271
KDM2A lysine (K)-specific demethylase 2A -0.0368898
RPS23 ribosomal protein S23 -0.0366271
RPS8 ribosomal protein S8 -0.0365642
TPT1 tumor protein, translationally-controlled 1 -0.0361807
SRP54 signal recognition particle 54kDa -0.0355027
TSC22D2 TSC22 domain family, member 2 -0.0352678
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0342023
GLS2 glutaminase 2 (liver, mitochondrial) -0.03359
INTS6 integrator complex subunit 6 -0.0327099
RPL5 ribosomal protein L5 -0.0323378
RAI14 retinoic acid induced 14 -0.0322237
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0319552
DDIT4 DNA-damage-inducible transcript 4 -0.0317648
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0317559
CCNY cyclin Y -0.0313129
TAPBP TAP binding protein (tapasin) -0.0311964
ZNF207 zinc finger protein 207 -0.0309449
VMP1 vacuole membrane protein 1 -0.0306761
HELZ helicase with zinc finger -0.0306069
MAP1B microtubule-associated protein 1B -0.0301102
DHRS9 dehydrogenase/reductase (SDR family) member 9 -0.0300942
FAM13A family with sequence similarity 13, member A -0.0300744
USP34 ubiquitin specific peptidase 34 -0.0297318
PKM pyruvate kinase, muscle -0.029458
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0291291
WSB1 WD repeat and SOCS box containing 1 -0.0286536
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0286421
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0283609
HMGA2 high mobility group AT-hook 2 -0.0283568
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0283268
MXI1 MAX interactor 1, dimerization protein -0.0282511
WAC WW domain containing adaptor with coiled-coil -0.0282322
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0281124
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0278288
RIOK3 RIO kinase 3 -0.0275679
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 -0.0272862
WDR45B WD repeat domain 45B -0.0267842
GOLGA4 golgin A4 -0.0267266
SNX6 sorting nexin 6 -0.0265445
RBM25 RNA binding motif protein 25 -0.0264918
MRPS6 mitochondrial ribosomal protein S6 -0.0264654
RTN3 reticulon 3 -0.0264166
ELL2 elongation factor, RNA polymerase II, 2 -0.0263468
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0262823
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0261642
VDAC1 voltage-dependent anion channel 1 -0.0259583
IFRD1 interferon-related developmental regulator 1 -0.0256737
SP100 SP100 nuclear antigen -0.0251676
HILPDA hypoxia inducible lipid droplet-associated -0.0251401
BZW2 basic leucine zipper and W2 domains 2 -0.0249342
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.024861
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0246655
RPS29 ribosomal protein S29 -0.0246292
RPS11 ribosomal protein S11 -0.0241388
RICTOR RPTOR independent companion of MTOR, complex 2 -0.023951