Riluzole hydrochloride_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Riluzole hydrochloride perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Riluzole hydrochloride_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 0.223383
MYH9 myosin, heavy chain 9, non-muscle 0.216377
LDHA lactate dehydrogenase A 0.126401
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.125815
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.119951
AKAP12 A kinase (PRKA) anchor protein 12 0.108219
MSN moesin 0.105327
EEF2 eukaryotic translation elongation factor 2 0.104565
LOC112694756 uncharaterized LOC112694756 0.097238
TNIP1 TNFAIP3 interacting protein 1 0.0925624
TRIO trio Rho guanine nucleotide exchange factor 0.0918363
NONO non-POU domain containing, octamer-binding 0.0882379
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.082664
CALR calreticulin 0.081937
IGFBP3 insulin-like growth factor binding protein 3 0.0781764
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0758927
TMSB10 thymosin beta 10 0.0732421
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0689122
HDAC9 histone deacetylase 9 0.0671389
NDRG1 N-myc downstream regulated 1 0.0656927
CEP250 centrosomal protein 250kDa 0.0646197
B2M beta-2-microglobulin 0.0624552
FTL ferritin, light polypeptide 0.059971
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0584318
VEGFA vascular endothelial growth factor A 0.0545453
PGK1 phosphoglycerate kinase 1 0.0541612
NUMA1 nuclear mitotic apparatus protein 1 0.0514291
HLA-B major histocompatibility complex, class I, B 0.0510378
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0507754
CD59 CD59 molecule, complement regulatory protein 0.0506599
ADM adrenomedullin 0.0502745
MT2A metallothionein 2A 0.0496468
FLNA filamin A, alpha 0.0491546
JUN jun proto-oncogene 0.0490999
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0487828
SRRM2 serine/arginine repetitive matrix 2 0.0475335
SMAD3 SMAD family member 3 0.0474548
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0463767
HLA-A major histocompatibility complex, class I, A 0.0460633
ZMIZ1 zinc finger, MIZ-type containing 1 0.0446162
RUNX1 runt-related transcription factor 1 0.0443938
CD44 CD44 molecule (Indian blood group) 0.0437911
SYNJ2 synaptojanin 2 0.0427173
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0404398
NIBAN2 niban apoptosis regulator 2 0.0403261
TENM2 teneurin transmembrane protein 2 0.0391566
SERINC3 serine incorporator 3 0.0377117
EGR1 early growth response 1 0.037347
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0373384
ENO1 enolase 1, (alpha) 0.0372619
FMNL2 formin-like 2 0.0371117
STC1 stanniocalcin 1 0.0365245
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0357538
GLIS3 GLIS family zinc finger 3 0.0356947
FLNB filamin B, beta 0.035626
NCOR2 nuclear receptor corepressor 2 0.035419
SFTPA2 surfactant protein A2 0.0353053
RPL3 ribosomal protein L3 0.0347586
MLPH melanophilin 0.034494
ELL2 elongation factor, RNA polymerase II, 2 0.0334242
NAV1 neuron navigator 1 0.0327152
ANXA2 annexin A2 0.0326102
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.032383
SFXN3 sideroflexin 3 0.0322006
OPTN optineurin 0.032048
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0318693
MACF1 microtubule-actin crosslinking factor 1 0.0307595
FNDC3B fibronectin type III domain containing 3B 0.0305968
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0303514
PPARD peroxisome proliferator-activated receptor delta 0.0299399
TAGLN2 transgelin 2 0.0286232
WWTR1 WW domain containing transcription regulator 1 0.0286189
RPL11 ribosomal protein L11 0.0284385
MYO10 myosin X 0.0283677
MYOF myoferlin 0.0283437
APLP2 amyloid beta (A4) precursor-like protein 2 0.028214
SFRP1 secreted frizzled-related protein 1 0.0278777
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0275888
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0274857
HSPA8 heat shock 70kDa protein 8 0.0274029
SET SET nuclear proto-oncogene 0.0273748
MT1X metallothionein 1X 0.0268105
PFN1 profilin 1 0.0266311
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 0.0265479
BHLHE40 basic helix-loop-helix family, member e40 0.0263817
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0260048
PTPRF protein tyrosine phosphatase, receptor type, F 0.0259575
FRMD4A FERM domain containing 4A 0.0257354
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.025711
ACTN1 actinin, alpha 1 0.025343
COL5A1 collagen, type V, alpha 1 0.0252667
FOSL1 FOS-like antigen 1 0.0251619
ASPH aspartate beta-hydroxylase 0.0248404
NFE2L1 nuclear factor, erythroid 2-like 1 0.0247299
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0245098
RLIM ring finger protein, LIM domain interacting 0.0238819
CPNE1 copine I 0.0236966
IGF2R insulin-like growth factor 2 receptor 0.0236153
HLA-C major histocompatibility complex, class I, C 0.0233078
MCL1 myeloid cell leukemia 1 0.0232862

decreased expression

Symbol Name Standardized Value
SOD2 superoxide dismutase 2, mitochondrial -0.196747
FN1 fibronectin 1 -0.15097
VCL vinculin -0.0995384
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0905754
BICC1 BicC family RNA binding protein 1 -0.0761049
VCAN versican -0.0686283
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0595103
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0516586
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0507524
KYNU kynureninase -0.0501351
INTS6 integrator complex subunit 6 -0.0498428
RAI14 retinoic acid induced 14 -0.0491025
AHNAK AHNAK nucleoprotein -0.04697
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0441418
FBXO32 F-box protein 32 -0.0432909
NCOA7 nuclear receptor coactivator 7 -0.0417799
QKI QKI, KH domain containing, RNA binding -0.0393862
EHBP1 EH domain binding protein 1 -0.037609
GNAS GNAS complex locus -0.0372786
NT5C2 5'-nucleotidase, cytosolic II -0.0370104
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.036474
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0362567
IFI16 interferon, gamma-inducible protein 16 -0.0353973
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0349676
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0347546
MARCKS myristoylated alanine-rich protein kinase C substrate -0.034722
NAP1L1 nucleosome assembly protein 1-like 1 -0.0342486
GOLGA4 golgin A4 -0.0340802
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0340459
PTBP3 polypyrimidine tract binding protein 3 -0.0336554
MAP4 microtubule-associated protein 4 -0.0333162
NABP1 nucleic acid binding protein 1 -0.0328308
EPAS1 endothelial PAS domain protein 1 -0.0327945
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0324362
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.0321585
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0319773
MMP12 matrix metallopeptidase 12 -0.0316498
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0316218
DIAPH2 diaphanous-related formin 2 -0.0313536
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.03114
TKT transketolase -0.0310905
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.031039
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0308891
IER3 immediate early response 3 -0.0307717
UGCG UDP-glucose ceramide glucosyltransferase -0.0307636
PHF3 PHD finger protein 3 -0.0307075
TNS3 tensin 3 -0.0300789
WSB1 WD repeat and SOCS box containing 1 -0.0297267
CDK13 cyclin-dependent kinase 13 -0.0296016
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0279886
SLC38A1 solute carrier family 38, member 1 -0.0279884
VIM vimentin -0.02762
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0273913
TLE4 transducin-like enhancer of split 4 -0.0272007
RIGI RNA sensor RIG-I -0.0269546
CD2AP CD2-associated protein -0.0267016
RPS6 ribosomal protein S6 -0.0266461
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0264056
AHI1 Abelson helper integration site 1 -0.0263232
PLSCR1 phospholipid scramblase 1 -0.0262961
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0261786
STK17A serine/threonine kinase 17a -0.0260716
RND3 Rho family GTPase 3 -0.0257822
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0257588
SDK1 sidekick cell adhesion molecule 1 -0.025712
RPL23 ribosomal protein L23 -0.0256881
TAPBP TAP binding protein (tapasin) -0.0256737
ZBTB20 zinc finger and BTB domain containing 20 -0.0255895
PALLD palladin, cytoskeletal associated protein -0.025535
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0250217
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0249781
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0248198
DCBLD1 discoidin, CUB and LCCL domain containing 1 -0.0246427
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0243688
SBF2 SET binding factor 2 -0.0243295
SCARB1 scavenger receptor class B, member 1 -0.0242907
KDM3A lysine (K)-specific demethylase 3A -0.0242893
ZC3H12C zinc finger CCCH-type containing 12C -0.024144
SQSTM1 sequestosome 1 -0.024095
LRRC7 leucine rich repeat containing 7 -0.0240443
OSMR oncostatin M receptor -0.0239449
KLHL24 kelch-like family member 24 -0.0237968
STAU1 staufen double-stranded RNA binding protein 1 -0.0237707
ABI3BP ABI family, member 3 (NESH) binding protein -0.0235482
COL4A2 collagen, type IV, alpha 2 -0.0231631
USP34 ubiquitin specific peptidase 34 -0.0231513
SRGN serglycin -0.0231459
FNIP1 folliculin interacting protein 1 -0.0230536
SLC38A2 solute carrier family 38, member 2 -0.0226339
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0226131
COL4A1 collagen, type IV, alpha 1 -0.0223387
DEK DEK proto-oncogene -0.0222178
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0220535
WDR45B WD repeat domain 45B -0.0219886
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0218842
GREM1 gremlin 1, DAN family BMP antagonist -0.0218311
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0216948
BASP1 brain abundant, membrane attached signal protein 1 -0.0216622
SOX5 SRY (sex determining region Y)-box 5 -0.0216249
SMC4 structural maintenance of chromosomes 4 -0.0215145