Ritonavir_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ritonavir perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ritonavir_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0471051
AHNAK AHNAK nucleoprotein 0.0357343
EFNA5 ephrin-A5 0.0335334
CDH13 cadherin 13 0.0281679
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0259544
VCL vinculin 0.0234578
GLIS3 GLIS family zinc finger 3 0.0227994
INTS6 integrator complex subunit 6 0.0201174
DST dystonin 0.019034
ASPH aspartate beta-hydroxylase 0.0168009
LOX lysyl oxidase 0.0166903
NEK7 NIMA-related kinase 7 0.0165667
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0162875
STAT1 signal transducer and activator of transcription 1, 91kDa 0.015903
SMYD3 SET and MYND domain containing 3 0.0155277
APP amyloid beta (A4) precursor protein 0.0155088
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0152419
PRELID2 PRELI domain containing 2 0.0145389
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0144394
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0143055
HDAC9 histone deacetylase 9 0.0142604
LPP LIM domain containing preferred translocation partner in lipoma 0.0141387
XKR6 XK, Kell blood group complex subunit-related family, member 6 0.014063
DOCK5 dedicator of cytokinesis 5 0.0139678
NABP1 nucleic acid binding protein 1 0.0138122
PDLIM5 PDZ and LIM domain 5 0.0137682
RABGAP1L RAB GTPase activating protein 1-like 0.0135874
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0132071
ZSWIM6 zinc finger, SWIM-type containing 6 0.0131059
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0130673
LNPEP leucyl/cystinyl aminopeptidase 0.0127332
MYH9 myosin, heavy chain 9, non-muscle 0.0126821
TRPC1 transient receptor potential cation channel, subfamily C, member 1 0.0123528
COL3A1 collagen, type III, alpha 1 0.0121738
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.012166
VMP1 vacuole membrane protein 1 0.0120797
CANX calnexin 0.0120426
FBXL17 F-box and leucine-rich repeat protein 17 0.0119599
SMAD3 SMAD family member 3 0.0119593
WWTR1 WW domain containing transcription regulator 1 0.0117263
NFE2L1 nuclear factor, erythroid 2-like 1 0.0117061
SDCCAG8 serologically defined colon cancer antigen 8 0.0116859
EGFR epidermal growth factor receptor 0.0116777
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0115352
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0114374
IPO9 importin 9 0.0108752
SAMD4A sterile alpha motif domain containing 4A 0.0108676
ANO6 anoctamin 6 0.0108241
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0107736
EXT1 exostosin glycosyltransferase 1 0.0107622
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0106802
DNMBP dynamin binding protein 0.0105525
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0105223
RASAL2 RAS protein activator like 2 0.0104332
EHBP1 EH domain binding protein 1 0.0103525
AUTS2 autism susceptibility candidate 2 0.0102522
NAV1 neuron navigator 1 0.0102206
MBNL1 muscleblind-like splicing regulator 1 0.010195
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0101831
BBS9 Bardet-Biedl syndrome 9 0.00994201
FBXL7 F-box and leucine-rich repeat protein 7 0.0098398
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.00981012
GLS2 glutaminase 2 (liver, mitochondrial) 0.0096874
AFF3 AF4/FMR2 family, member 3 0.00961088
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.00958081
ADAM32 ADAM metallopeptidase domain 32 0.00939238
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.00921248
FSTL1 follistatin-like 1 0.00908078
AHNAK2 AHNAK nucleoprotein 2 0.00893121
KLF12 Kruppel-like factor 12 0.00890321
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.00879478
ANKRD36 ankyrin repeat domain 36 0.00877277
ERRFI1 ERBB receptor feedback inhibitor 1 0.00876233
NRIP1 nuclear receptor interacting protein 1 0.00869718
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2 0.00867761
CEP112 centrosomal protein 112kDa 0.00859376
LARP1B La ribonucleoprotein domain family, member 1B 0.00858029
TGFBR1 transforming growth factor, beta receptor 1 0.00853889
TUSC3 tumor suppressor candidate 3 0.00849707
FAT1 FAT atypical cadherin 1 0.00841425
FNDC3B fibronectin type III domain containing 3B 0.00840174
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 0.00838694
BICD1 bicaudal D homolog 1 (Drosophila) 0.00834004
EHMT1 euchromatic histone-lysine N-methyltransferase 1 0.00825472
RASA2 RAS p21 protein activator 2 0.00815922
NCKAP1 NCK-associated protein 1 0.00799869
ZC3H11A zinc finger CCCH-type containing 11A 0.00796967
LYST lysosomal trafficking regulator 0.00794472
HSPA8 heat shock 70kDa protein 8 0.00792389
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.00788817
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.00788287
EXOC4 exocyst complex component 4 0.00787271
NID1 nidogen 1 0.00785388
ADD1 adducin 1 (alpha) 0.00784614
SEPTIN9 septin 9 0.00782919
SATB2 SATB homeobox 2 0.00768411
FER fer (fps/fes related) tyrosine kinase 0.00766435
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.00764331
PHF14 PHD finger protein 14 0.0076184
CDK13 cyclin-dependent kinase 13 0.00761601

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.380494
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.224753
TMSB10 thymosin beta 10 -0.169422
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.154327
IGFBP3 insulin-like growth factor binding protein 3 -0.111813
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0776626
NDRG1 N-myc downstream regulated 1 -0.0748602
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0742872
B2M beta-2-microglobulin -0.0719886
S100A10 S100 calcium binding protein A10 -0.0710485
S100A6 S100 calcium binding protein A6 -0.0679348
LMNA lamin A/C -0.062508
HLA-B major histocompatibility complex, class I, B -0.0604815
CSTB cystatin B (stefin B) -0.0591022
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -0.0583995
AKAP12 A kinase (PRKA) anchor protein 12 -0.057266
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0568728
MT2A metallothionein 2A -0.0567785
PLAT plasminogen activator, tissue -0.0530479
DLG1 discs, large homolog 1 (Drosophila) -0.0525779
PTMA prothymosin, alpha -0.051241
POTEF POTE ankyrin domain family, member F -0.0474581
FN1 fibronectin 1 -0.0461174
MAP1B microtubule-associated protein 1B -0.0454481
SLC38A1 solute carrier family 38, member 1 -0.0443338
SUCNR1 succinate receptor 1 -0.0425753
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0422278
TPM4 tropomyosin 4 -0.040692
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0382874
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0368187
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0360194
TAGLN2 transgelin 2 -0.035599
CD99 CD99 molecule -0.0346965
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0346503
S100A4 S100 calcium binding protein A4 -0.0341172
UBC ubiquitin C -0.0339254
CALR calreticulin -0.0336182
IFITM3 interferon induced transmembrane protein 3 -0.0330021
ABI3BP ABI family, member 3 (NESH) binding protein -0.0324266
PKM pyruvate kinase, muscle -0.0317878
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0306063
FTL ferritin, light polypeptide -0.030422
IFITM1 interferon induced transmembrane protein 1 -0.0299766
PFN1 profilin 1 -0.0291461
PDIA3 protein disulfide isomerase family A, member 3 -0.0286784
TRIO trio Rho guanine nucleotide exchange factor -0.0278496
HSPB1 heat shock 27kDa protein 1 -0.0278092
HLA-C major histocompatibility complex, class I, C -0.027566
S100A11 S100 calcium binding protein A11 -0.0274596
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0273253
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0263594
MX2 MX dynamin-like GTPase 2 -0.0259022
PRSS23 protease, serine, 23 -0.0255728
TIMP2 TIMP metallopeptidase inhibitor 2 -0.024975
LOXL2 lysyl oxidase-like 2 -0.024248
FOSL1 FOS-like antigen 1 -0.0241328
ISG15 ISG15 ubiquitin-like modifier -0.0239337
GARS1 glycyl-tRNA synthetase 1 -0.0239047
ZMYND8 zinc finger, MYND-type containing 8 -0.0237705
GOLGA4 golgin A4 -0.0236755
HLA-A major histocompatibility complex, class I, A -0.0233531
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0233491
RTN4 reticulon 4 -0.0227816
PLAUR plasminogen activator, urokinase receptor -0.0225666
SEC61G Sec61 gamma subunit -0.0223975
DDIT4 DNA-damage-inducible transcript 4 -0.0223107
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0222902
MT1X metallothionein 1X -0.0221687
KRT81 keratin 81, type II -0.0218393
CKAP4 cytoskeleton-associated protein 4 -0.02141
HILPDA hypoxia inducible lipid droplet-associated -0.0213888
ADM adrenomedullin -0.0210152
RPS6 ribosomal protein S6 -0.0209046
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0206084
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0206054
SETD5 SET domain containing 5 -0.020055
ENO2 enolase 2 (gamma, neuronal) -0.0199796
IFI6 interferon, alpha-inducible protein 6 -0.0198139
RPL35A ribosomal protein L35a -0.0196395
SH3BP5 SH3-domain binding protein 5 (BTK-associated) -0.0195542
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0194225
WSB1 WD repeat and SOCS box containing 1 -0.0193714
H3-3B H3.3 histone B -0.0193669
LY6E lymphocyte antigen 6 complex, locus E -0.0191866
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0189225
RPS19 ribosomal protein S19 -0.0184063
TUBB4B tubulin, beta 4B class IVb -0.0180802
CD109 CD109 molecule -0.0178726
ACTG1 actin gamma 1 -0.017737
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0177267
FAM162A family with sequence similarity 162, member A -0.0176186
SEPTIN7 septin 7 -0.0176024
INSIG1 insulin induced gene 1 -0.0174348
CCND1 cyclin D1 -0.0173712
MYADM myeloid-associated differentiation marker -0.0171906
GNAS GNAS complex locus -0.0171155
ACBD3 acyl-CoA binding domain containing 3 -0.0171105
ULK1 unc-51 like autophagy activating kinase 1 -0.0170594
TPT1 tumor protein, translationally-controlled 1 -0.0169121
RPS8 ribosomal protein S8 -0.0168976