Ritonavir_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ritonavir perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ritonavir_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NLGN1 neuroligin 1 0.0734864
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0627303
POTEF POTE ankyrin domain family, member F 0.0619316
CENPF centromere protein F, 350/400kDa 0.0505412
PCBP2 poly(rC) binding protein 2 0.0456589
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0381345
TUBA1B tubulin, alpha 1b 0.0351492
SFPQ splicing factor proline/glutamine-rich 0.0316223
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0314893
CCN2 cellular communication network factor 2 0.0310554
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0295624
SMC4 structural maintenance of chromosomes 4 0.0291085
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0277963
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0277283
TGM2 transglutaminase 2 0.0273067
ERBIN erbb2 interacting protein 0.027266
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.026079
HMGA1 high mobility group AT-hook 1 0.0255172
WDR43 WD repeat domain 43 0.0240873
PFN1 profilin 1 0.0220614
ATP5F1B ATP synthase F1 subunit beta 0.0218923
ECT2 epithelial cell transforming 2 0.0215756
ANKRD28 ankyrin repeat domain 28 0.0197887
SKIL SKI-like proto-oncogene 0.0197296
ZNF638 zinc finger protein 638 0.0192891
LOC102724023 ES1 protein homolog, mitochondrial 0.0186538
CENPE centromere protein E, 312kDa 0.0178533
LDHA lactate dehydrogenase A 0.0175092
ACTG1 actin gamma 1 0.017364
CCDC88A coiled-coil domain containing 88A 0.0170591
RAB7A RAB7A, member RAS oncogene family 0.0169229
ADIPOR2 adiponectin receptor 2 0.0168582
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.016806
PHF14 PHD finger protein 14 0.016603
RTN4 reticulon 4 0.016594
DIAPH3 diaphanous-related formin 3 0.0164804
FOXM1 forkhead box M1 0.0164768
ACLY ATP citrate lyase 0.0164247
TSC22D2 TSC22 domain family, member 2 0.0162635
PTMS parathymosin 0.0162203
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0160961
RBMX RNA binding motif protein, X-linked 0.0160885
PKM pyruvate kinase, muscle 0.0160503
KIF18A kinesin family member 18A 0.0158426
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0157705
SON SON DNA binding protein 0.0156357
PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 0.0156066
RNPS1 RNA binding protein S1, serine-rich domain 0.0155966
ATAD2 ATPase family, AAA domain containing 2 0.0153595
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0152848
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0151858
EDARADD EDAR-associated death domain 0.0147787
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0146434
BCLAF1 BCL2-associated transcription factor 1 0.0144985
HDGF hepatoma-derived growth factor 0.0143616
SRSF3 serine/arginine-rich splicing factor 3 0.0140519
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.0138028
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0137991
KIF18B kinesin family member 18B 0.0137601
TBK1 TANK-binding kinase 1 0.0137191
CHD1 chromodomain helicase DNA binding protein 1 0.0134863
TCP1 t-complex 1 0.0134478
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.0133312
ZNF644 zinc finger protein 644 0.0133267
PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form) 0.0133266
ARF4 ADP-ribosylation factor 4 0.0132724
COL5A2 collagen, type V, alpha 2 0.013225
PPDPF pancreatic progenitor cell differentiation and proliferation factor 0.0131537
TJP1 tight junction protein 1 0.0130903
EIF4A1 eukaryotic translation initiation factor 4A1 0.0130582
PTBP3 polypyrimidine tract binding protein 3 0.0129954
FTH1 ferritin, heavy polypeptide 1 0.0128705
TUBA1C tubulin, alpha 1c 0.0128446
DEK DEK proto-oncogene 0.0128432
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0128431
KMT2D lysine (K)-specific methyltransferase 2D 0.0126414
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0125509
NCEH1 neutral cholesterol ester hydrolase 1 0.0125185
NUP58 nucleoporin 58 0.0124709
MYADM myeloid-associated differentiation marker 0.0124648
TPX2 TPX2, microtubule-associated 0.0122944
SRSF5 serine/arginine-rich splicing factor 5 0.0122024
SNCA synuclein, alpha (non A4 component of amyloid precursor) 0.0120891
SLMAP sarcolemma associated protein 0.0120869
PTEN phosphatase and tensin homolog 0.0120847
RBBP4 retinoblastoma binding protein 4 0.0120415
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0119832
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0118897
ZNF148 zinc finger protein 148 0.0118779
HP1BP3 heterochromatin protein 1, binding protein 3 0.0118408
KIF23 kinesin family member 23 0.0118013
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.0116618
TGOLN2 trans-golgi network protein 2 0.0116324
PNPT1 polyribonucleotide nucleotidyltransferase 1 0.0115506
MACROH2A1 macroH2A.1 histone 0.0115165
FNDC3B fibronectin type III domain containing 3B 0.0113332
PLS3 plastin 3 0.0112883
MARCHF4 membrane associated ring-CH-type finger 4 0.0112417
CCT7 chaperonin containing TCP1, subunit 7 (eta) 0.0112
YBX1 Y box binding protein 1 0.0111845

decreased expression

Symbol Name Standardized Value
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.157681
VIM vimentin -0.105763
PCDH7 protocadherin 7 -0.0927602
TMSB10 thymosin beta 10 -0.088949
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0816523
ANXA1 annexin A1 -0.0785059
RPS12 ribosomal protein S12 -0.0748362
EHBP1 EH domain binding protein 1 -0.0706328
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0695688
ASPH aspartate beta-hydroxylase -0.0663297
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0635332
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0628821
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0621827
PDE4D phosphodiesterase 4D, cAMP-specific -0.060963
ANKRD12 ankyrin repeat domain 12 -0.0585089
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.057991
TPT1 tumor protein, translationally-controlled 1 -0.0579232
TXNRD1 thioredoxin reductase 1 -0.0569874
RPS3 ribosomal protein S3 -0.0567696
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0546406
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.052893
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0525241
HMGA2 high mobility group AT-hook 2 -0.0522893
EIF1 eukaryotic translation initiation factor 1 -0.0521199
PTMA prothymosin, alpha -0.0512772
RPS2 ribosomal protein S2 -0.051247
MMP12 matrix metallopeptidase 12 -0.0511691
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0498549
RPS8 ribosomal protein S8 -0.0477159
IFIH1 interferon induced with helicase C domain 1 -0.0475701
JMJD1C jumonji domain containing 1C -0.0462634
MGAT4C MGAT4 family, member C -0.0461561
RPL26 ribosomal protein L26 -0.0448028
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0447065
AHNAK AHNAK nucleoprotein -0.0443758
RPL12 ribosomal protein L12 -0.044103
ZNF804A zinc finger protein 804A -0.0425223
RPL19 ribosomal protein L19 -0.0425092
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.041336
PCDH9 protocadherin 9 -0.0396037
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0391489
RPL23 ribosomal protein L23 -0.0391171
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0391132
SYT1 synaptotagmin I -0.0388283
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0384242
RAB10 RAB10, member RAS oncogene family -0.0381566
RPL37A ribosomal protein L37a -0.0375671
CANX calnexin -0.0364771
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0364324
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0359045
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0353084
AREG amphiregulin -0.0351497
ZNF217 zinc finger protein 217 -0.0350358
SLC38A2 solute carrier family 38, member 2 -0.0349467
KDM3A lysine (K)-specific demethylase 3A -0.0345982
H1-0 H1.0 linker histone -0.0345938
CXADR coxsackie virus and adenovirus receptor -0.0340533
MACF1 microtubule-actin crosslinking factor 1 -0.0334758
RPL35A ribosomal protein L35a -0.0331733
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0329522
RPL36 ribosomal protein L36 -0.0328689
NHSL1 NHS-like 1 -0.0325652
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0325565
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0325158
RPL38 ribosomal protein L38 -0.0319266
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0318826
RPS19 ribosomal protein S19 -0.0311169
RPLP2 ribosomal protein, large, P2 -0.0310693
KLF6 Kruppel-like factor 6 -0.030882
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0307016
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.030536
RPS27A ribosomal protein S27a -0.0303444
YBX3 Y box binding protein 3 -0.0302748
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0301298
DPYD dihydropyrimidine dehydrogenase -0.0301248
NAP1L1 nucleosome assembly protein 1-like 1 -0.0297778
CLDN1 claudin 1 -0.0297082
RPL31 ribosomal protein L31 -0.0293875
ZBTB20 zinc finger and BTB domain containing 20 -0.029332
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0292028
CUX1 cut-like homeobox 1 -0.0292021
EGLN1 egl-9 family hypoxia-inducible factor 1 -0.0289135
S100A6 S100 calcium binding protein A6 -0.0287849
GOLGB1 golgin B1 -0.0287341
FBXO11 F-box protein 11 -0.0286046
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0284417
RPS25 ribosomal protein S25 -0.0283275
SPATS2 spermatogenesis associated, serine-rich 2 -0.0282854
PDE4B phosphodiesterase 4B, cAMP-specific -0.028081
ZFAND3 zinc finger, AN1-type domain 3 -0.0279814
RPL37 ribosomal protein L37 -0.0276814
DTNA dystrobrevin, alpha -0.027471
MBD5 methyl-CpG binding domain protein 5 -0.027379
WNK1 WNK lysine deficient protein kinase 1 -0.0273226
MED13L mediator complex subunit 13-like -0.02714
RPL34 ribosomal protein L34 -0.0268455
MTAP methylthioadenosine phosphorylase -0.0268332
RPL36A ribosomal protein L36a -0.0264932
R3HDM2 R3H domain containing 2 -0.02643
RPS6 ribosomal protein S6 -0.0262776